RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 BORCS6Q96GS4 357 aa9.65□□□□□ -0.86
CALD1-220ENST00000482470 GMLQ99445 158 aa9.65□□□□□ -0.86
CALD1-220ENST00000482470 DNPEPQ9ULA0 475 aa9.65□□□□□ -0.86
CALD1-220ENST00000482470 PDE4DIPQ5VU43 2346 aa9.65□□□□□ -0.87
CALD1-220ENST00000482470 A0A0G2JND7 137 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 SPDYE16A6NNV3 312 aaPredicted RBP9.64□□□□□ -0.87
CALD1-220ENST00000482470 CDH16O75309 829 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 CST3P01034 146 aaPredicted RBP9.64□□□□□ -0.87
CALD1-220ENST00000482470 SAT1P21673 171 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 ADORA2BP29275 332 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 ALDH5A1P51649 535 aaPredicted RBP9.64□□□□□ -0.87
CALD1-220ENST00000482470 SESN3P58005 492 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 EIF3EP60228 445 aaKnown RBP9.64□□□□□ -0.87
CALD1-220ENST00000482470 IER5Q5VY09 327 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 SLFN11Q7Z7L1 901 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 PPM1NQ8N819 430 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 FAM71DQ8N9W8 422 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 RILPQ96NA2 401 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 CGRRF1Q99675 332 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 C2orf40Q9H1Z8 148 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 O00370 1275 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 PLA2G6O60733 806 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 CFHP08603 1231 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 RBP3P10745 1247 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 KCNA2P16389 499 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 ERFP50548 548 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 ARL4CP56559 192 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 FSTL1Q12841 308 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 DNAJC3Q13217 504 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 VGLL4Q14135 290 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 PSMD6Q15008 389 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 HIF1AQ16665 826 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 QPCTQ16769 361 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 ZACNQ401N2 412 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 TREML2Q5T2D2 321 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 CATSPERGQ6ZRH7 1159 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 DCLK3Q9C098 648 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 ACTR5Q9H9F9 607 aaPredicted RBP9.64□□□□□ -0.87
CALD1-220ENST00000482470 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.64□□□□□ -0.872e-6■□□□□ 8.8
CALD1-220ENST00000482470 STRIP2Q9ULQ0 834 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 IRF6O14896 467 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 ADCY3O60266 1144 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 TROVE2P10155 538 aaKnown RBP eCLIP9.64□□□□□ -0.87
CALD1-220ENST00000482470 RFC5P40937 340 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 TGFB2P61812 414 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 CAV1Q03135 178 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 MYO1EQ12965 1108 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 POTEAQ6S8J7 498 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 ZNF677Q86XU0 584 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 CCDC110Q8TBZ0 833 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 PORCNQ9H237 461 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 TRABDQ9H4I3 376 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 KLC4Q9NSK0 619 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 GPATCH2LQ9NWQ4 482 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 NOCTQ9UK39 431 aaKnown RBP9.64□□□□□ -0.87
CALD1-220ENST00000482470 CHMP2BQ9UQN3 213 aa9.64□□□□□ -0.87
CALD1-220ENST00000482470 A0A087WZ62 844 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 B4GALT5O43286 388 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 CYP1A2P05177 515 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 KRT7P08729 469 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 HNRNPH1P31943 449 aaKnown RBP9.63□□□□□ -0.87
CALD1-220ENST00000482470 GCLCP48506 637 aaPredicted RBP9.63□□□□□ -0.87
CALD1-220ENST00000482470 HIRAP54198 1017 aaPredicted RBP9.63□□□□□ -0.87
CALD1-220ENST00000482470 CCNA1P78396 465 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 CAPSQ13938 189 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 SPARCL1Q14515 664 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 GPR162Q16538 588 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 HSDL1Q3SXM5 330 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 ZNF572Q7Z3I7 529 aaPredicted RBP9.63□□□□□ -0.87
CALD1-220ENST00000482470 VPS52Q8N1B4 723 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 SAMD3Q8N6K7 520 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 SPATA18Q8TC71 538 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 FDXACB1Q9BRP7 624 aaPredicted RBP9.63□□□□□ -0.87
CALD1-220ENST00000482470 STXBP5LQ9Y2K9 1186 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 BTAF1O14981 1849 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 LYPLA2O95372 231 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 TTC4O95801 387 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 BCAR1P56945 870 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 C3orf62Q6ZUJ4 267 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 ZC3H3Q8IXZ2 948 aaKnown RBP9.63□□□□□ -0.87
CALD1-220ENST00000482470 ACTL9Q8TC94 416 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 CCHCR1Q8TD31 782 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 LRRN4Q8WUT4 740 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 MCUR1Q96AQ8 359 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 SLC13A1Q9BZW2 595 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 SMARCAD1Q9H4L7 1026 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 DHX35Q9H5Z1 703 aaKnown RBP9.63□□□□□ -0.87
CALD1-220ENST00000482470 TPX2Q9ULW0 747 aaKnown RBP9.63□□□□□ -0.87
CALD1-220ENST00000482470 NAV1Q8NEY1 1877 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 EIF4E1BA6NMX2 242 aaKnown RBP9.63□□□□□ -0.87
CALD1-220ENST00000482470 ZC3H11AO75152 810 aaKnown RBP eCLIP9.63□□□□□ -0.87
CALD1-220ENST00000482470 PPFIA2O75334 1257 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 OTUD4Q01804 1114 aaKnown RBP9.63□□□□□ -0.87
CALD1-220ENST00000482470 SP2Q02086 613 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 MAMLD1Q13495 774 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 ABHD15Q6UXT9 468 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 CD302Q8IX05 232 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 PIK3R5Q8WYR1 880 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 MFSD14AQ96MC6 490 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 ASNSD1Q9NWL6 643 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms