RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 ERVK-5Q9HDB9 667 aa12.44□□□□□ -0.42
GGPS1-205ENST00000482013 SLC38A7Q9NVC3 462 aa12.44□□□□□ -0.42
GGPS1-205ENST00000482013 PARVAQ9NVD7 372 aa12.44□□□□□ -0.42
GGPS1-205ENST00000482013 GDAP2Q9NXN4 497 aa12.44□□□□□ -0.42
GGPS1-205ENST00000482013 STRIP2Q9ULQ0 834 aa12.44□□□□□ -0.42
GGPS1-205ENST00000482013 SRCAPQ6ZRS2 3230 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 CCDC188H7C350 402 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 MYO1FO00160 1098 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 PGRMC1O00264 195 aaKnown RBP12.43□□□□□ -0.42
GGPS1-205ENST00000482013 ATP8B1O43520 1251 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 CEP104O60308 925 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 ERLIN1O75477 346 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 CALCAP01258 141 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 TFRCP02786 760 aaKnown RBP12.43□□□□□ -0.42
GGPS1-205ENST00000482013 INHAP05111 366 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 HSPA6P17066 643 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 PAX3P23760 479 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 BRD2P25440 801 aaKnown RBP12.43□□□□□ -0.42
GGPS1-205ENST00000482013 LRPAP1P30533 357 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 GRK4P32298 578 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 MAN1A1P33908 653 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 MESDQ14696 234 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 TRIM71Q2Q1W2 868 aaKnown RBP12.43□□□□□ -0.42
GGPS1-205ENST00000482013 SV2CQ496J9 727 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 SGO2Q562F6 1265 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 FBXO47Q5MNV8 452 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 C9orf57Q5W0N0 161 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 LHX8Q68G74 356 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 FBXO38Q6PIJ6 1188 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 DPH6Q7L8W6 267 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 ERICH1Q86X53 443 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 SLC43A3Q8NBI5 491 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 NOA1Q8NC60 698 aaKnown RBP12.43□□□□□ -0.42
GGPS1-205ENST00000482013 TFAP2BQ92481 460 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 CD101Q93033 1021 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 PLVAPQ9BX97 442 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 NT5C1AQ9BXI3 368 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 ELOVL4Q9GZR5 314 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 MIS12Q9H081 205 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 SMYD3Q9H7B4 428 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 FAM105AQ9NUU6 356 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 WDR35Q9P2L0 1181 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 TMEM59LQ9UK28 342 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 PACSIN2Q9UNF0 486 aaPredicted RBP12.43□□□□□ -0.42
GGPS1-205ENST00000482013 GIT1Q9Y2X7 761 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 HES2Q9Y543 173 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 SCN1AP35498 2009 aa12.43□□□□□ -0.42
GGPS1-205ENST00000482013 CFHP08603 1231 aa12.42□□□□□ -0.42
GGPS1-205ENST00000482013 ITGA4P13612 1032 aa12.42□□□□□ -0.42
GGPS1-205ENST00000482013 CD19P15391 556 aa12.42□□□□□ -0.42
GGPS1-205ENST00000482013 COMTP21964 271 aa12.42□□□□□ -0.42
GGPS1-205ENST00000482013 RRM1P23921 792 aa12.42□□□□□ -0.42
GGPS1-205ENST00000482013 AKAP5P24588 427 aa12.42□□□□□ -0.42
GGPS1-205ENST00000482013 CTNNA1P35221 906 aaKnown RBP12.42□□□□□ -0.42
GGPS1-205ENST00000482013 THPOP40225 353 aa12.42□□□□□ -0.42
GGPS1-205ENST00000482013 CDH8P55286 799 aa12.42□□□□□ -0.42
GGPS1-205ENST00000482013 RBM10P98175 930 aaKnown RBP12.42□□□□□ -0.42
GGPS1-205ENST00000482013 DSC3Q14574 896 aa12.42□□□□□ -0.42
GGPS1-205ENST00000482013 ZNF268Q14587 947 aaPredicted RBP12.42□□□□□ -0.42
GGPS1-205ENST00000482013 ZNF394Q53GI3 561 aa12.42□□□□□ -0.42
GGPS1-205ENST00000482013 LIMS2Q7Z4I7 341 aa12.42□□□□□ -0.42
GGPS1-205ENST00000482013 FEZF2Q8TBJ5 459 aa12.42□□□□□ -0.42
GGPS1-205ENST00000482013 WNT8BQ93098 351 aa12.42□□□□□ -0.42
GGPS1-205ENST00000482013 PSMB7Q99436 277 aa12.42□□□□□ -0.42
GGPS1-205ENST00000482013 ZSWIM1Q9BR11 485 aa12.42□□□□□ -0.42
GGPS1-205ENST00000482013 GOLPH3Q9H4A6 298 aa12.42□□□□□ -0.42
GGPS1-205ENST00000482013 UBN1Q9NPG3 1134 aa12.42□□□□□ -0.42
GGPS1-205ENST00000482013 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.42□□□□□ -0.42
GGPS1-205ENST00000482013 NOD1Q9Y239 953 aa12.42□□□□□ -0.42
GGPS1-205ENST00000482013 PCDHA3Q9Y5H8 950 aa12.42□□□□□ -0.42
GGPS1-205ENST00000482013 A0A0U1RQG5 324 aaPredicted RBP12.41□□□□□ -0.42
GGPS1-205ENST00000482013 TCRBV5S1A1TA0A578 114 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 KPNA7A9QM74 516 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 ATMINO43313 823 aaPredicted RBP12.41□□□□□ -0.42
GGPS1-205ENST00000482013 SPOPO43791 374 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 PROSCO94903 275 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 RHOXF2BP0C7M4 288 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 SETSIPP0DME0 302 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 YY1P25490 414 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 RAP1GAPP47736 663 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 GABRB2P47870 512 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 TAF6P49848 677 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 PEX5P50542 639 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 GUCY2FP51841 1108 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 NDST1P52848 882 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 SNX16P57768 344 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 C2orf54Q08AI8 447 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 NFX1Q12986 1120 aaKnown RBP12.41□□□□□ -0.42
GGPS1-205ENST00000482013 PAK2Q13177 524 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 MAMLD1Q13495 774 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 TMCO3Q6UWJ1 677 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 LCLAT1Q6UWP7 414 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 MMS22LQ6ZRQ5 1243 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 WDTC1Q8N5D0 677 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 C3orf20Q8ND61 904 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.41□□□□□ -0.42
GGPS1-205ENST00000482013 ZNF296Q8WUU4 475 aaPredicted RBP12.41□□□□□ -0.42
GGPS1-205ENST00000482013 C18orf25Q96B23 403 aaPredicted RBP12.41□□□□□ -0.42
GGPS1-205ENST00000482013 PGBD4Q96DM1 585 aa12.41□□□□□ -0.42
GGPS1-205ENST00000482013 MS4A14Q96JA4 679 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms