RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 ZNF211Q13398 564 aaPredicted RBP20.29■□□□□ 0.84
CCM2-214ENST00000481194 DHX33Q9H6R0 707 aaKnown RBP20.29■□□□□ 0.84
CCM2-214ENST00000481194 LSM7Q9UK45 103 aaKnown RBP20.29■□□□□ 0.84
CCM2-214ENST00000481194 AP3B1O00203 1094 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 GIPC1O14908 333 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 PHF2O75151 1096 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 CA4P22748 312 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 GRM5P41594 1212 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 TPI1P60174 286 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 NFE2Q16621 373 aaPredicted RBP20.29■□□□□ 0.84
CCM2-214ENST00000481194 CCDC121Q6ZUS5 278 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 PIDD1Q9HB75 910 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 HSDL1Q3SXM5 330 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 ATL2Q8NHH9 583 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 CCT6BQ92526 530 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 SNF8Q96H20 258 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 ATP8A1Q9Y2Q0 1164 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 PCDHA2Q9Y5H9 948 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 A0A087X0T9 212 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 CRCPO75575 148 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 FAM228BP0C875 321 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 SLC2A3P11169 496 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 RPL10AP62906 217 aaKnown RBP20.29■□□□□ 0.84
CCM2-214ENST00000481194 CENPCQ03188 943 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 BST2Q10589 180 aaKnown RBP20.29■□□□□ 0.84
CCM2-214ENST00000481194 TMEM39AQ9NV64 488 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 SEPT4O43236 478 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 DEUP1Q05D60 604 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 MEA1Q16626 185 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 CCDC137Q6PK04 289 aaKnown RBP20.29■□□□□ 0.84
CCM2-214ENST00000481194 UBA3Q8TBC4 463 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 CCDC110Q8TBZ0 833 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 MFSD14AQ96MC6 490 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 HDAC6Q9UBN7 1215 aa20.29■□□□□ 0.84
CCM2-214ENST00000481194 BOLA3Q53S33 107 aa20.28■□□□□ 0.84
CCM2-214ENST00000481194 TDRD10Q5VZ19 366 aaKnown RBP20.28■□□□□ 0.84
CCM2-214ENST00000481194 SLITRK1Q96PX8 696 aa20.28■□□□□ 0.84
CCM2-214ENST00000481194 TJP2Q9UDY2 1190 aa20.28■□□□□ 0.84
CCM2-214ENST00000481194 PRG3Q9Y2Y8 225 aaPredicted RBP20.28■□□□□ 0.84
CCM2-214ENST00000481194 CHD4Q14839 1912 aa20.28■□□□□ 0.84
CCM2-214ENST00000481194 PGK1P00558 417 aa20.28■□□□□ 0.84
CCM2-214ENST00000481194 C4orf22Q6V702 233 aa20.28■□□□□ 0.84
CCM2-214ENST00000481194 CDT1Q9H211 546 aa20.28■□□□□ 0.84
CCM2-214ENST00000481194 METTL5Q9NRN9 209 aaKnown RBP20.28■□□□□ 0.84
CCM2-214ENST00000481194 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.28■□□□□ 0.84
CCM2-214ENST00000481194 HEY1Q9Y5J3 304 aa20.28■□□□□ 0.84
CCM2-214ENST00000481194 PRLRP16471 622 aa20.28■□□□□ 0.84
CCM2-214ENST00000481194 PAMP19021 973 aa20.28■□□□□ 0.84
CCM2-214ENST00000481194 COMTP21964 271 aa20.28■□□□□ 0.84
CCM2-214ENST00000481194 MSH2P43246 934 aa20.28■□□□□ 0.84
CCM2-214ENST00000481194 ALDH1A3P47895 512 aa20.28■□□□□ 0.84
CCM2-214ENST00000481194 LDLRAD1Q5T700 205 aa20.28■□□□□ 0.84
CCM2-214ENST00000481194 SPATA4Q8NEY3 305 aa20.28■□□□□ 0.84
CCM2-214ENST00000481194 ALG6Q9Y672 507 aa20.28■□□□□ 0.84
CCM2-214ENST00000481194 PSMD3O43242 534 aa20.28■□□□□ 0.84
CCM2-214ENST00000481194 GABPB1Q06547 395 aaPredicted RBP20.28■□□□□ 0.84
CCM2-214ENST00000481194 GRB14Q14449 540 aa20.28■□□□□ 0.84
CCM2-214ENST00000481194 NYAP1Q6ZVC0 841 aa20.28■□□□□ 0.84
CCM2-214ENST00000481194 REXO1L1PQ8IX06 675 aa20.28■□□□□ 0.84
CCM2-214ENST00000481194 VPS52Q8N1B4 723 aa20.28■□□□□ 0.84
CCM2-214ENST00000481194 PLCD3Q8N3E9 789 aa20.28■□□□□ 0.84
CCM2-214ENST00000481194 LENG9Q96B70 501 aa20.28■□□□□ 0.84
CCM2-214ENST00000481194 CARD9Q9H257 536 aa20.28■□□□□ 0.84
CCM2-214ENST00000481194 SMAPO00193 183 aa20.27■□□□□ 0.84
CCM2-214ENST00000481194 PRRG1O14668 218 aa20.27■□□□□ 0.84
CCM2-214ENST00000481194 PQBP1O60828 265 aaKnown RBP20.27■□□□□ 0.84
CCM2-214ENST00000481194 PARNO95453 639 aaKnown RBP20.27■□□□□ 0.84
CCM2-214ENST00000481194 ALDH2P05091 517 aa20.27■□□□□ 0.84
CCM2-214ENST00000481194 MX2P20592 715 aa20.27■□□□□ 0.84
CCM2-214ENST00000481194 STX2P32856 288 aa20.27■□□□□ 0.84
CCM2-214ENST00000481194 KPNA2P52292 529 aaKnown RBP20.27■□□□□ 0.84
CCM2-214ENST00000481194 MTA1Q13330 715 aa20.27■□□□□ 0.84
CCM2-214ENST00000481194 ZNF571Q7Z3V5 609 aaPredicted RBP20.27■□□□□ 0.84
CCM2-214ENST00000481194 UNC93AQ86WB7 457 aa20.27■□□□□ 0.84
CCM2-214ENST00000481194 ZBTB45Q96K62 511 aaPredicted RBP20.27■□□□□ 0.84
CCM2-214ENST00000481194 SEPT5Q99719 369 aaPredicted RBP20.27■□□□□ 0.84
CCM2-214ENST00000481194 THAP2Q9H0W7 228 aa20.27■□□□□ 0.84
CCM2-214ENST00000481194 FRMD3A2A2Y4 597 aa20.27■□□□□ 0.84
CCM2-214ENST00000481194 TAB3Q8N5C8 712 aaPredicted RBP20.27■□□□□ 0.84
CCM2-214ENST00000481194 PACSIN2Q9UNF0 486 aaPredicted RBP20.27■□□□□ 0.84
CCM2-214ENST00000481194 FAN1Q9Y2M0 1017 aa20.27■□□□□ 0.84
CCM2-214ENST00000481194 AP1G2O75843 785 aa20.27■□□□□ 0.84
CCM2-214ENST00000481194 SMPD1P17405 629 aa20.27■□□□□ 0.84
CCM2-214ENST00000481194 GRK4P32298 578 aa20.27■□□□□ 0.84
CCM2-214ENST00000481194 ADCY2Q08462 1091 aa20.27■□□□□ 0.84
CCM2-214ENST00000481194 TRIP13Q15645 432 aaPredicted RBP20.27■□□□□ 0.84
CCM2-214ENST00000481194 PYROXD1Q8WU10 500 aa20.27■□□□□ 0.84
CCM2-214ENST00000481194 ARHGAP20Q9P2F6 1191 aa20.27■□□□□ 0.84
CCM2-214ENST00000481194 F9P00740 461 aa20.27■□□□□ 0.83
CCM2-214ENST00000481194 KRT14P02533 472 aa20.27■□□□□ 0.83
CCM2-214ENST00000481194 MGAT5BQ3V5L5 792 aa20.27■□□□□ 0.83
CCM2-214ENST00000481194 MIIPQ5JXC2 388 aa20.27■□□□□ 0.83
CCM2-214ENST00000481194 ACOT1Q86TX2 421 aa20.27■□□□□ 0.83
CCM2-214ENST00000481194 SMC6Q96SB8 1091 aa20.27■□□□□ 0.83
CCM2-214ENST00000481194 FAM129AQ9BZQ8 928 aa20.27■□□□□ 0.83
CCM2-214ENST00000481194 COL24A1Q17RW2 1714 aa20.27■□□□□ 0.83
CCM2-214ENST00000481194 PRKCIP41743 596 aa20.26■□□□□ 0.83
CCM2-214ENST00000481194 KCNA1Q09470 495 aa20.26■□□□□ 0.83
CCM2-214ENST00000481194 THOC5Q13769 683 aaKnown RBP20.26■□□□□ 0.83
CCM2-214ENST00000481194 ARHGEF19Q8IW93 802 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms