RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 CARSP49589 748 aaKnown RBP8.79□□□□□ -1
LSM5-210ENST00000480956 ZNF41P51814 821 aaPredicted RBP8.79□□□□□ -1
LSM5-210ENST00000480956 KHDC1Q4VXA5 237 aaKnown RBP8.79□□□□□ -1
LSM5-210ENST00000480956 MFSD5Q6N075 450 aa8.79□□□□□ -1
LSM5-210ENST00000480956 H1FNTQ75WM6 255 aaPredicted RBP8.79□□□□□ -1
LSM5-210ENST00000480956 SV2AQ7L0J3 742 aa8.79□□□□□ -1
LSM5-210ENST00000480956 VSIG10LQ86VR7 867 aa8.79□□□□□ -1
LSM5-210ENST00000480956 OR2I1PQ8NGU4 316 aa8.79□□□□□ -1
LSM5-210ENST00000480956 SNX27Q96L92 541 aa8.79□□□□□ -1
LSM5-210ENST00000480956 RUNDC3BQ96NL0 473 aa8.79□□□□□ -1
LSM5-210ENST00000480956 TRAPPC9Q96Q05 1148 aa8.79□□□□□ -1
LSM5-210ENST00000480956 TMEM237Q96Q45 408 aa8.79□□□□□ -1
LSM5-210ENST00000480956 VRK1Q99986 396 aaPredicted RBP8.79□□□□□ -1
LSM5-210ENST00000480956 NDST4Q9H3R1 872 aa8.79□□□□□ -1
LSM5-210ENST00000480956 PCDHA1Q9Y5I3 950 aa8.79□□□□□ -1
LSM5-210ENST00000480956 FAM169AQ9Y6X4 670 aa8.79□□□□□ -1
LSM5-210ENST00000480956 DCAF1Q9Y4B6 1507 aa8.79□□□□□ -1
LSM5-210ENST00000480956 RGS9O75916 674 aaPredicted RBP8.78□□□□□ -1
LSM5-210ENST00000480956 USP1O94782 785 aa8.78□□□□□ -1
LSM5-210ENST00000480956 CNPP09543 421 aaKnown RBP8.78□□□□□ -1
LSM5-210ENST00000480956 NPPBP16860 134 aa8.78□□□□□ -1
LSM5-210ENST00000480956 PAFAH1B1P43034 410 aa8.78□□□□□ -1
LSM5-210ENST00000480956 PPARAQ07869 468 aa8.78□□□□□ -1
LSM5-210ENST00000480956 MGAT2Q10469 447 aa8.78□□□□□ -1
LSM5-210ENST00000480956 TCP11X2Q5H9J9 407 aa8.78□□□□□ -1
LSM5-210ENST00000480956 EXOSC6Q5RKV6 272 aaKnown RBP8.78□□□□□ -1
LSM5-210ENST00000480956 KLHL10Q6JEL2 608 aa8.78□□□□□ -1
LSM5-210ENST00000480956 RRAGAQ7L523 313 aa8.78□□□□□ -1
LSM5-210ENST00000480956 CPNE8Q86YQ8 564 aa8.78□□□□□ -1
LSM5-210ENST00000480956 KIAA2013Q8IYS2 634 aa8.78□□□□□ -1
LSM5-210ENST00000480956 KRT35Q92764 455 aa8.78□□□□□ -1
LSM5-210ENST00000480956 BICD1Q96G01 975 aa8.78□□□□□ -1
LSM5-210ENST00000480956 NOL10Q9BSC4 688 aaKnown RBP8.78□□□□□ -1
LSM5-210ENST00000480956 COL25A1Q9BXS0 654 aaPredicted RBP8.78□□□□□ -1
LSM5-210ENST00000480956 OSBPL6Q9BZF3 934 aa8.78□□□□□ -1
LSM5-210ENST00000480956 BRF2Q9HAW0 419 aa8.78□□□□□ -1
LSM5-210ENST00000480956 TBC1D23Q9NUY8 699 aa8.78□□□□□ -1
LSM5-210ENST00000480956 COQ3Q9NZJ6 369 aa8.78□□□□□ -1
LSM5-210ENST00000480956 ZNF212Q9UDV6 495 aa8.78□□□□□ -1
LSM5-210ENST00000480956 SCOCQ9UIL1 159 aa8.78□□□□□ -1
LSM5-210ENST00000480956 DSEQ9UL01 958 aa8.78□□□□□ -1
LSM5-210ENST00000480956 CAMK2AQ9UQM7 478 aa8.78□□□□□ -1
LSM5-210ENST00000480956 RB1CC1Q8TDY2 1594 aa8.78□□□□□ -1
LSM5-210ENST00000480956 WTIPA6NIX2 430 aaPredicted RBP8.77□□□□□ -1
LSM5-210ENST00000480956 TXNL1O43396 289 aa8.77□□□□□ -1
LSM5-210ENST00000480956 WIPF1O43516 503 aa8.77□□□□□ -1
LSM5-210ENST00000480956 PFKMP08237 780 aa8.77□□□□□ -1
LSM5-210ENST00000480956 SESN2P58004 480 aaPredicted RBP8.77□□□□□ -1
LSM5-210ENST00000480956 COASYQ13057 564 aa8.77□□□□□ -1
LSM5-210ENST00000480956 WDR73Q6P4I2 378 aa8.77□□□□□ -1
LSM5-210ENST00000480956 ANKS1BQ7Z6G8 1248 aa8.77□□□□□ -1
LSM5-210ENST00000480956 ZFPM1Q8IX07 1006 aa8.77□□□□□ -1
LSM5-210ENST00000480956 VGLL2Q8N8G2 317 aa8.77□□□□□ -1
LSM5-210ENST00000480956 BICD2Q8TD16 824 aa8.77□□□□□ -1
LSM5-210ENST00000480956 ZNF384Q8TF68 577 aa8.77□□□□□ -1
LSM5-210ENST00000480956 GRK7Q8WTQ7 553 aa8.77□□□□□ -1
LSM5-210ENST00000480956 DEPDC1BQ8WUY9 529 aa8.77□□□□□ -1
LSM5-210ENST00000480956 MAML1Q92585 1016 aa8.77□□□□□ -1
LSM5-210ENST00000480956 HSPH1Q92598 858 aa8.77□□□□□ -1
LSM5-210ENST00000480956 PTP4A1Q93096 173 aa8.77□□□□□ -1
LSM5-210ENST00000480956 C16orf45Q96MC5 204 aaPredicted RBP8.77□□□□□ -1
LSM5-210ENST00000480956 UROC1Q96N76 676 aa8.77□□□□□ -1
LSM5-210ENST00000480956 FTOQ9C0B1 505 aaKnown RBP eCLIP8.77□□□□□ -1
LSM5-210ENST00000480956 COPS7BQ9H9Q2 264 aaPredicted RBP8.77□□□□□ -1
LSM5-210ENST00000480956 DECR2Q9NUI1 292 aa8.77□□□□□ -1
LSM5-210ENST00000480956 TDP1Q9NUW8 608 aa8.77□□□□□ -1
LSM5-210ENST00000480956 LPAR3Q9UBY5 353 aa8.77□□□□□ -1
LSM5-210ENST00000480956 ADGRE2Q9UHX3 823 aa8.77□□□□□ -1
LSM5-210ENST00000480956 LYVE1Q9Y5Y7 322 aa8.77□□□□□ -1
LSM5-210ENST00000480956 NACADO15069 1562 aa8.77□□□□□ -1.01
LSM5-210ENST00000480956 FAM171A2A8MVW0 826 aa8.77□□□□□ -1.01
LSM5-210ENST00000480956 FOXP2O15409 715 aa8.77□□□□□ -1.01
LSM5-210ENST00000480956 KERAO60938 352 aa8.77□□□□□ -1.01
LSM5-210ENST00000480956 TLX1P31314 330 aaPredicted RBP8.77□□□□□ -1.01
LSM5-210ENST00000480956 AKT1P31749 480 aa8.77□□□□□ -1.01
LSM5-210ENST00000480956 KRT2P35908 639 aa8.77□□□□□ -1.01
LSM5-210ENST00000480956 ANP32AP39687 249 aaKnown RBP8.77□□□□□ -1.01
LSM5-210ENST00000480956 BAG6P46379 1132 aa8.77□□□□□ -1.01
LSM5-210ENST00000480956 FLT3LGP49771 235 aa8.77□□□□□ -1.01
LSM5-210ENST00000480956 ARFIP2P53365 341 aa8.77□□□□□ -1.01
LSM5-210ENST00000480956 RARSP54136 660 aaKnown RBP8.77□□□□□ -1.01
LSM5-210ENST00000480956 SCAPQ12770 1279 aa8.77□□□□□ -1.01
LSM5-210ENST00000480956 SLC14A1Q13336 389 aa8.77□□□□□ -1.01
LSM5-210ENST00000480956 NOMO1Q15155 1222 aa8.77□□□□□ -1.01
LSM5-210ENST00000480956 SEC23BQ15437 767 aa8.77□□□□□ -1.01
LSM5-210ENST00000480956 TTC38Q5R3I4 469 aa8.77□□□□□ -1.01
LSM5-210ENST00000480956 C16orf87Q6PH81 154 aa8.77□□□□□ -1.01
LSM5-210ENST00000480956 USP49Q70CQ1 688 aa8.77□□□□□ -1.01
LSM5-210ENST00000480956 IKBIPQ70UQ0 350 aa8.77□□□□□ -1.01
LSM5-210ENST00000480956 PIWIL3Q7Z3Z3 882 aaKnown RBP8.77□□□□□ -1.01
LSM5-210ENST00000480956 NLRP10Q86W26 655 aa8.77□□□□□ -1.01
LSM5-210ENST00000480956 KCNN1Q92952 543 aa8.77□□□□□ -1.01
LSM5-210ENST00000480956 VPS33AQ96AX1 596 aa8.77□□□□□ -1.01
LSM5-210ENST00000480956 APOPT1Q96IL0 206 aa8.77□□□□□ -1.01
LSM5-210ENST00000480956 GBP5Q96PP8 586 aa8.77□□□□□ -1.01
LSM5-210ENST00000480956 CITED2Q99967 270 aaPredicted RBP8.77□□□□□ -1.01
LSM5-210ENST00000480956 ZCWPW1Q9H0M4 648 aa8.77□□□□□ -1.01
LSM5-210ENST00000480956 PDE7BQ9NP56 450 aa8.77□□□□□ -1.01
LSM5-210ENST00000480956 FANCFQ9NPI8 374 aa8.77□□□□□ -1.01
LSM5-210ENST00000480956 BTG4Q9NY30 223 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms