RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 F8W810 466 aa18.75■□□□□ 0.59
UPF3A-206ENST00000480362 TMEM189-UBE2V1I3L0A0 370 aa18.75■□□□□ 0.59
UPF3A-206ENST00000480362 I3L4J1 428 aa18.75■□□□□ 0.59
UPF3A-206ENST00000480362 DDX3XO00571 662 aaKnown RBP eCLIP18.75■□□□□ 0.593e-7■■■■□ 19.9
UPF3A-206ENST00000480362 ITGB1P05556 798 aa18.75■□□□□ 0.59
UPF3A-206ENST00000480362 FAM228BP0C875 321 aa18.75■□□□□ 0.59
UPF3A-206ENST00000480362 CHRNB2P17787 502 aa18.75■□□□□ 0.59
UPF3A-206ENST00000480362 ANXA13P27216 316 aa18.75■□□□□ 0.59
UPF3A-206ENST00000480362 GNA15P30679 374 aa18.75■□□□□ 0.59
UPF3A-206ENST00000480362 GNL1P36915 607 aaPredicted RBP18.75■□□□□ 0.59
UPF3A-206ENST00000480362 SLC11A1P49279 550 aa18.75■□□□□ 0.59
UPF3A-206ENST00000480362 GFPT1Q06210 699 aaPredicted RBP18.75■□□□□ 0.59
UPF3A-206ENST00000480362 WSCD1Q658N2 575 aa18.75■□□□□ 0.59
UPF3A-206ENST00000480362 ADGRF2Q8IZF7 708 aa18.75■□□□□ 0.59
UPF3A-206ENST00000480362 PDCL2Q8N4E4 241 aa18.75■□□□□ 0.59
UPF3A-206ENST00000480362 SLC4A11Q8NBS3 891 aa18.75■□□□□ 0.59
UPF3A-206ENST00000480362 ACRBPQ8NEB7 543 aa18.75■□□□□ 0.59
UPF3A-206ENST00000480362 OLIG1Q8TAK6 271 aa18.75■□□□□ 0.59
UPF3A-206ENST00000480362 LNX1Q8TBB1 728 aaPredicted RBP18.75■□□□□ 0.59
UPF3A-206ENST00000480362 KBTBD7Q8WVZ9 684 aa18.75■□□□□ 0.59
UPF3A-206ENST00000480362 DDX1Q92499 740 aaKnown RBP18.75■□□□□ 0.59
UPF3A-206ENST00000480362 TMEM175Q9BSA9 504 aa18.75■□□□□ 0.59
UPF3A-206ENST00000480362 COLEC11Q9BWP8 271 aa18.75■□□□□ 0.59
UPF3A-206ENST00000480362 NT5C1AQ9BXI3 368 aa18.75■□□□□ 0.59
UPF3A-206ENST00000480362 SNX25Q9H3E2 840 aa18.75■□□□□ 0.59
UPF3A-206ENST00000480362 HMGXB4Q9UGU5 601 aa18.75■□□□□ 0.59
UPF3A-206ENST00000480362 PUF60Q9UHX1 559 aaKnown RBP18.75■□□□□ 0.59
UPF3A-206ENST00000480362 PRG3Q9Y2Y8 225 aaPredicted RBP18.75■□□□□ 0.59
UPF3A-206ENST00000480362 ADGRG1Q9Y653 693 aa18.75■□□□□ 0.59
UPF3A-206ENST00000480362 THAP12O43422 761 aa18.74■□□□□ 0.59
UPF3A-206ENST00000480362 LCA5LO95447 670 aa18.74■□□□□ 0.59
UPF3A-206ENST00000480362 GALTP07902 379 aa18.74■□□□□ 0.59
UPF3A-206ENST00000480362 MMEP08473 750 aa18.74■□□□□ 0.59
UPF3A-206ENST00000480362 PAEPP09466 180 aa18.74■□□□□ 0.59
UPF3A-206ENST00000480362 WARSP23381 471 aaKnown RBP18.74■□□□□ 0.59
UPF3A-206ENST00000480362 CDR2Q01850 454 aa18.74■□□□□ 0.59
UPF3A-206ENST00000480362 CYP27A1Q02318 531 aa18.74■□□□□ 0.59
UPF3A-206ENST00000480362 ORC1Q13415 861 aa18.74■□□□□ 0.59
UPF3A-206ENST00000480362 BMS1Q14692 1282 aaKnown RBP18.74■□□□□ 0.59
UPF3A-206ENST00000480362 SPA17Q15506 151 aa18.74■□□□□ 0.59
UPF3A-206ENST00000480362 SLC18A3Q16572 532 aa18.74■□□□□ 0.59
UPF3A-206ENST00000480362 UNC93AQ86WB7 457 aa18.74■□□□□ 0.59
UPF3A-206ENST00000480362 ZNF677Q86XU0 584 aa18.74■□□□□ 0.59
UPF3A-206ENST00000480362 GLYCTKQ8IVS8 523 aa18.74■□□□□ 0.59
UPF3A-206ENST00000480362 TMEM86AQ8N2M4 240 aa18.74■□□□□ 0.59
UPF3A-206ENST00000480362 SLC30A5Q8TAD4 765 aa18.74■□□□□ 0.59
UPF3A-206ENST00000480362 HERVK_113Q902F9 699 aa18.74■□□□□ 0.59
UPF3A-206ENST00000480362 SUSD3Q96L08 255 aa18.74■□□□□ 0.59
UPF3A-206ENST00000480362 HEXIM2Q96MH2 286 aaKnown RBP18.74■□□□□ 0.59
UPF3A-206ENST00000480362 CWH43Q9H720 699 aa18.74■□□□□ 0.59
UPF3A-206ENST00000480362 SEPT11Q9NVA2 429 aaKnown RBP18.74■□□□□ 0.59
UPF3A-206ENST00000480362 CXXC1Q9P0U4 656 aaPredicted RBP18.74■□□□□ 0.59
UPF3A-206ENST00000480362 NME7Q9Y5B8 376 aa18.74■□□□□ 0.59
UPF3A-206ENST00000480362 TIMM13Q9Y5L4 95 aaPredicted RBP18.74■□□□□ 0.59
UPF3A-206ENST00000480362 A8MXQ7 604 aa18.73■□□□□ 0.59
UPF3A-206ENST00000480362 M0QZQ0 153 aa18.73■□□□□ 0.59
UPF3A-206ENST00000480362 ZNF263O14978 683 aa18.73■□□□□ 0.59
UPF3A-206ENST00000480362 TADA2AO75478 443 aa18.73■□□□□ 0.59
UPF3A-206ENST00000480362 PDGFRBP09619 1106 aa18.73■□□□□ 0.59
UPF3A-206ENST00000480362 ODC1P11926 461 aa18.73■□□□□ 0.59
UPF3A-206ENST00000480362 CD19P15391 556 aa18.73■□□□□ 0.59
UPF3A-206ENST00000480362 BRD2P25440 801 aaKnown RBP18.73■□□□□ 0.59
UPF3A-206ENST00000480362 LMO2P25791 158 aa18.73■□□□□ 0.59
UPF3A-206ENST00000480362 BCAR1P56945 870 aa18.73■□□□□ 0.59
UPF3A-206ENST00000480362 KRT83P78385 493 aa18.73■□□□□ 0.59
UPF3A-206ENST00000480362 FMO1Q01740 532 aa18.73■□□□□ 0.59
UPF3A-206ENST00000480362 OSTM1Q86WC4 334 aa18.73■□□□□ 0.59
UPF3A-206ENST00000480362 CMTR2Q8IYT2 770 aaKnown RBP18.73■□□□□ 0.59
UPF3A-206ENST00000480362 C17orf53Q8N3J3 647 aaPredicted RBP18.73■□□□□ 0.59
UPF3A-206ENST00000480362 ZNF606Q8WXB4 792 aa18.73■□□□□ 0.59
UPF3A-206ENST00000480362 PCDHB18PQ96TA0 734 aa18.73■□□□□ 0.59
UPF3A-206ENST00000480362 RC3H2Q9HBD1 1191 aaKnown RBP18.73■□□□□ 0.59
UPF3A-206ENST00000480362 REXO2Q9Y3B8 237 aaKnown RBP18.73■□□□□ 0.59
UPF3A-206ENST00000480362 NR2E3Q9Y5X4 410 aa18.73■□□□□ 0.59
UPF3A-206ENST00000480362 COL4A6Q14031 1691 aa18.73■□□□□ 0.59
UPF3A-206ENST00000480362 NT5C1B-RDH14C9J2C7 533 aa18.72■□□□□ 0.59
UPF3A-206ENST00000480362 GABRDO14764 452 aa18.72■□□□□ 0.59
UPF3A-206ENST00000480362 HCRTO43612 131 aa18.72■□□□□ 0.59
UPF3A-206ENST00000480362 IPO7O95373 1038 aaKnown RBP18.72■□□□□ 0.59
UPF3A-206ENST00000480362 CCDC175P0C221 793 aa18.72■□□□□ 0.59
UPF3A-206ENST00000480362 MSNP26038 577 aaKnown RBP18.72■□□□□ 0.59
UPF3A-206ENST00000480362 BTG3Q14201 252 aaPredicted RBP18.72■□□□□ 0.59
UPF3A-206ENST00000480362 CCDC122Q5T0U0 273 aa18.72■□□□□ 0.59
UPF3A-206ENST00000480362 ACOT1Q86TX2 421 aa18.72■□□□□ 0.59
UPF3A-206ENST00000480362 METTL23Q86XA0 190 aa18.72■□□□□ 0.59
UPF3A-206ENST00000480362 TFAP2BQ92481 460 aa18.72■□□□□ 0.59
UPF3A-206ENST00000480362 YME1L1Q96TA2 773 aa18.72■□□□□ 0.59
UPF3A-206ENST00000480362 ZSWIM1Q9BR11 485 aa18.72■□□□□ 0.59
UPF3A-206ENST00000480362 PDCL3Q9H2J4 239 aa18.72■□□□□ 0.59
UPF3A-206ENST00000480362 TRMT1Q9NXH9 659 aaKnown RBP18.72■□□□□ 0.59
UPF3A-206ENST00000480362 NAGPAQ9UK23 515 aa18.72■□□□□ 0.59
UPF3A-206ENST00000480362 DSEQ9UL01 958 aa18.72■□□□□ 0.59
UPF3A-206ENST00000480362 PCDHB8Q9UN66 801 aa18.72■□□□□ 0.59
UPF3A-206ENST00000480362 STXBP5LQ9Y2K9 1186 aa18.72■□□□□ 0.59
UPF3A-206ENST00000480362 PPP2R2CQ9Y2T4 447 aa18.72■□□□□ 0.59
UPF3A-206ENST00000480362 SLC4A7Q9Y6M7 1214 aa18.72■□□□□ 0.59
UPF3A-206ENST00000480362 PTPRSQ13332 1948 aa18.71■□□□□ 0.59
UPF3A-206ENST00000480362 ARHGEF37A1IGU5 675 aa18.71■□□□□ 0.59
UPF3A-206ENST00000480362 TRAPPC3O43617 180 aa18.71■□□□□ 0.59
UPF3A-206ENST00000480362 GJB5O95377 273 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms