RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 GIT1Q9Y2X7 761 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 ALG6Q9Y672 507 aa11.72□□□□□ -0.53
VTI1A-204ENST00000480057 V9GYY5 206 aaPredicted RBP11.72□□□□□ -0.53
VTI1A-204ENST00000480057 A0A0U1RQG5 324 aaPredicted RBP11.71□□□□□ -0.53
VTI1A-204ENST00000480057 CCDC66A2RUB6 948 aa11.71□□□□□ -0.53
VTI1A-204ENST00000480057 PDE2AO00408 941 aaPredicted RBP11.71□□□□□ -0.53
VTI1A-204ENST00000480057 KCNK3O14649 394 aa11.71□□□□□ -0.53
VTI1A-204ENST00000480057 DDX3YO15523 660 aaKnown RBP11.71□□□□□ -0.53
VTI1A-204ENST00000480057 ITGA4P13612 1032 aa11.71□□□□□ -0.53
VTI1A-204ENST00000480057 BRD2P25440 801 aaKnown RBP11.71□□□□□ -0.53
VTI1A-204ENST00000480057 THPOP40225 353 aa11.71□□□□□ -0.53
VTI1A-204ENST00000480057 DSC3Q14574 896 aa11.71□□□□□ -0.53
VTI1A-204ENST00000480057 BRD3Q15059 726 aa11.71□□□□□ -0.53
VTI1A-204ENST00000480057 CNGA2Q16280 664 aa11.71□□□□□ -0.53
VTI1A-204ENST00000480057 SV2CQ496J9 727 aa11.71□□□□□ -0.53
VTI1A-204ENST00000480057 GLE1Q53GS7 698 aaKnown RBP11.71□□□□□ -0.53
VTI1A-204ENST00000480057 DPH6Q7L8W6 267 aa11.71□□□□□ -0.53
VTI1A-204ENST00000480057 PDCL2Q8N4E4 241 aa11.71□□□□□ -0.53
VTI1A-204ENST00000480057 SLC4A11Q8NBS3 891 aa11.71□□□□□ -0.53
VTI1A-204ENST00000480057 CPA5Q8WXQ8 436 aa11.71□□□□□ -0.53
VTI1A-204ENST00000480057 NAP1L3Q99457 506 aaPredicted RBP11.71□□□□□ -0.53
VTI1A-204ENST00000480057 NT5C1AQ9BXI3 368 aa11.71□□□□□ -0.53
VTI1A-204ENST00000480057 MIS12Q9H081 205 aa11.71□□□□□ -0.53
VTI1A-204ENST00000480057 UBN1Q9NPG3 1134 aa11.71□□□□□ -0.53
VTI1A-204ENST00000480057 PARVAQ9NVD7 372 aa11.71□□□□□ -0.53
VTI1A-204ENST00000480057 WDR35Q9P2L0 1181 aa11.71□□□□□ -0.53
VTI1A-204ENST00000480057 TUBGCP4Q9UGJ1 667 aa11.71□□□□□ -0.53
VTI1A-204ENST00000480057 RAB21Q9UL25 225 aa11.71□□□□□ -0.53
VTI1A-204ENST00000480057 NOD1Q9Y239 953 aa11.71□□□□□ -0.53
VTI1A-204ENST00000480057 HES2Q9Y543 173 aa11.71□□□□□ -0.53
VTI1A-204ENST00000480057 CCDC151A5D8V7 595 aa11.7□□□□□ -0.54
VTI1A-204ENST00000480057 CCDC188H7C350 402 aa11.7□□□□□ -0.54
VTI1A-204ENST00000480057 PGRMC1O00264 195 aaKnown RBP11.7□□□□□ -0.54
VTI1A-204ENST00000480057 SETSIPP0DME0 302 aa11.7□□□□□ -0.54
VTI1A-204ENST00000480057 CD19P15391 556 aa11.7□□□□□ -0.54
VTI1A-204ENST00000480057 HSPA6P17066 643 aa11.7□□□□□ -0.54
VTI1A-204ENST00000480057 RRM1P23921 792 aa11.7□□□□□ -0.54
VTI1A-204ENST00000480057 AKAP5P24588 427 aa11.7□□□□□ -0.54
VTI1A-204ENST00000480057 MAN1A1P33908 653 aa11.7□□□□□ -0.54
VTI1A-204ENST00000480057 RAP1GAPP47736 663 aa11.7□□□□□ -0.54
VTI1A-204ENST00000480057 TAF6P49848 677 aa11.7□□□□□ -0.54
VTI1A-204ENST00000480057 GUCY2FP51841 1108 aa11.7□□□□□ -0.54
VTI1A-204ENST00000480057 PAK2Q13177 524 aa11.7□□□□□ -0.54
VTI1A-204ENST00000480057 PPP2R5EQ16537 467 aa11.7□□□□□ -0.54
VTI1A-204ENST00000480057 SGO2Q562F6 1265 aa11.7□□□□□ -0.54
VTI1A-204ENST00000480057 WDR93Q6P2C0 686 aa11.7□□□□□ -0.54
VTI1A-204ENST00000480057 LIMS2Q7Z4I7 341 aa11.7□□□□□ -0.54
VTI1A-204ENST00000480057 TFAP2BQ92481 460 aa11.7□□□□□ -0.54
VTI1A-204ENST00000480057 CD101Q93033 1021 aa11.7□□□□□ -0.54
VTI1A-204ENST00000480057 PGBD4Q96DM1 585 aa11.7□□□□□ -0.54
VTI1A-204ENST00000480057 PPP1R10Q96QC0 940 aaKnown RBP11.7□□□□□ -0.54
VTI1A-204ENST00000480057 ZSWIM1Q9BR11 485 aa11.7□□□□□ -0.54
VTI1A-204ENST00000480057 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.7□□□□□ -0.547e-9■■□□□ 12.4
VTI1A-204ENST00000480057 C11orf70Q9BRQ4 267 aa11.7□□□□□ -0.54
VTI1A-204ENST00000480057 APOL6Q9BWW8 343 aa11.7□□□□□ -0.54
VTI1A-204ENST00000480057 ELOVL4Q9GZR5 314 aa11.7□□□□□ -0.54
VTI1A-204ENST00000480057 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.7□□□□□ -0.54
VTI1A-204ENST00000480057 ANKZF1Q9H8Y5 726 aa11.7□□□□□ -0.54
VTI1A-204ENST00000480057 TMEM59LQ9UK28 342 aa11.7□□□□□ -0.54
VTI1A-204ENST00000480057 PACSIN2Q9UNF0 486 aaPredicted RBP11.7□□□□□ -0.54
VTI1A-204ENST00000480057 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.7□□□□□ -0.54
VTI1A-204ENST00000480057 TRIP11Q15643 1979 aa11.7□□□□□ -0.54
VTI1A-204ENST00000480057 A0A1W2PQ45 241 aaPredicted RBP11.69□□□□□ -0.54
VTI1A-204ENST00000480057 A0A1W2PQY0 241 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 TCRBV5S1A1TA0A578 114 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 KPNA7A9QM74 516 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 KBTBD13C9JR72 458 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 MYO1FO00160 1098 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 ARVCFO00192 962 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 O00370 1275 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 INPPL1O15357 1258 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 PROSCO94903 275 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 CALCAP01258 141 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 TFRCP02786 760 aaKnown RBP11.69□□□□□ -0.54
VTI1A-204ENST00000480057 MYCNP04198 464 aaPredicted RBP11.69□□□□□ -0.54
VTI1A-204ENST00000480057 CFHP08603 1231 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 CTSHP09668 335 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 COMTP21964 271 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 CXCR5P32302 372 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 CTNNA1P35221 906 aaKnown RBP11.69□□□□□ -0.54
VTI1A-204ENST00000480057 NDST1P52848 882 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 CDH8P55286 799 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 NFX1Q12986 1120 aaKnown RBP11.69□□□□□ -0.54
VTI1A-204ENST00000480057 MAMLD1Q13495 774 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 LPIN1Q14693 890 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 MESDQ14696 234 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 ZNF394Q53GI3 561 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 ARHGAP17Q68EM7 881 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 LCLAT1Q6UWP7 414 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 MMS22LQ6ZRQ5 1243 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 ERICH1Q86X53 443 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 PASD1Q8IV76 773 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 WDTC1Q8N5D0 677 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 TOP6BLQ8N6T0 577 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 NOA1Q8NC60 698 aaKnown RBP11.69□□□□□ -0.54
VTI1A-204ENST00000480057 C3orf20Q8ND61 904 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.69□□□□□ -0.54
VTI1A-204ENST00000480057 FEZF2Q8TBJ5 459 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 HNRNPLLQ8WVV9 542 aaKnown RBP11.69□□□□□ -0.54
VTI1A-204ENST00000480057 C18orf25Q96B23 403 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms