RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 NEDD9Q14511 834 aa26.02■■□□□ 1.76
SYNGAP1-206ENST00000479510 SPOCD1Q6ZMY3 1216 aa26.02■■□□□ 1.76
SYNGAP1-206ENST00000479510 RGS9BPQ6ZS82 235 aa26.02■■□□□ 1.76
SYNGAP1-206ENST00000479510 FRMD8P1Q9BZ68 369 aaPredicted RBP26.02■■□□□ 1.76
SYNGAP1-206ENST00000479510 ANKFY1Q9P2R3 1169 aa26.02■■□□□ 1.76
SYNGAP1-206ENST00000479510 ZNF148Q9UQR1 794 aa26.02■■□□□ 1.76
SYNGAP1-206ENST00000479510 EFR3BQ9Y2G0 817 aa26.02■■□□□ 1.76
SYNGAP1-206ENST00000479510 EXOC1LA0A1B0GW35 172 aa26.02■■□□□ 1.76
SYNGAP1-206ENST00000479510 ITGAVP06756 1048 aa26.02■■□□□ 1.76
SYNGAP1-206ENST00000479510 NQO1P15559 274 aaKnown RBP26.02■■□□□ 1.76
SYNGAP1-206ENST00000479510 CDH5P33151 784 aaPredicted RBP26.02■■□□□ 1.76
SYNGAP1-206ENST00000479510 SURF1Q15526 300 aa26.02■■□□□ 1.76
SYNGAP1-206ENST00000479510 TMEM63BQ5T3F8 832 aa26.02■■□□□ 1.76
SYNGAP1-206ENST00000479510 DNAJC24Q6P3W2 148 aa26.02■■□□□ 1.76
SYNGAP1-206ENST00000479510 CAMKK2Q96RR4 588 aa26.02■■□□□ 1.76
SYNGAP1-206ENST00000479510 NOD2Q9HC29 1040 aa26.02■■□□□ 1.76
SYNGAP1-206ENST00000479510 GEMIN8Q9NWZ8 242 aaKnown RBP26.02■■□□□ 1.76
SYNGAP1-206ENST00000479510 KLHL14Q9P2G3 628 aa26.02■■□□□ 1.76
SYNGAP1-206ENST00000479510 DNPEPQ9ULA0 475 aa26.02■■□□□ 1.76
SYNGAP1-206ENST00000479510 ADCY3O60266 1144 aa26.01■■□□□ 1.75
SYNGAP1-206ENST00000479510 EFNA5P52803 228 aa26.01■■□□□ 1.75
SYNGAP1-206ENST00000479510 VCPP55072 806 aaKnown RBP26.01■■□□□ 1.75
SYNGAP1-206ENST00000479510 ZBTB41Q5SVQ8 909 aa26.01■■□□□ 1.75
SYNGAP1-206ENST00000479510 MFSD7Q6UXD7 560 aa26.01■■□□□ 1.75
SYNGAP1-206ENST00000479510 CATSPERGQ6ZRH7 1159 aa26.01■■□□□ 1.75
SYNGAP1-206ENST00000479510 TRABD2AQ86V40 505 aa26.01■■□□□ 1.75
SYNGAP1-206ENST00000479510 GDAP1Q8TB36 358 aa26.01■■□□□ 1.75
SYNGAP1-206ENST00000479510 ECT2Q9H8V3 914 aa26.01■■□□□ 1.75
SYNGAP1-206ENST00000479510 SAYSD1Q9NPB0 183 aa26.01■■□□□ 1.75
SYNGAP1-206ENST00000479510 NRBP2Q9NSY0 501 aa26.01■■□□□ 1.75
SYNGAP1-206ENST00000479510 AGAP1Q9UPQ3 857 aa26.01■■□□□ 1.75
SYNGAP1-206ENST00000479510 SMG5Q9UPR3 1016 aaKnown RBP26.01■■□□□ 1.75
SYNGAP1-206ENST00000479510 GH1P01241 217 aa26■■□□□ 1.75
SYNGAP1-206ENST00000479510 TAC1P20366 129 aa26■■□□□ 1.75
SYNGAP1-206ENST00000479510 GJC1P36383 396 aa26■■□□□ 1.75
SYNGAP1-206ENST00000479510 RPL7AP62424 266 aaKnown RBP26■■□□□ 1.75
SYNGAP1-206ENST00000479510 OASLQ15646 514 aaKnown RBP26■■□□□ 1.75
SYNGAP1-206ENST00000479510 NBPF12Q5TAG4 269 aaPredicted RBP26■■□□□ 1.75
SYNGAP1-206ENST00000479510 POLNQ7Z5Q5 900 aa26■■□□□ 1.75
SYNGAP1-206ENST00000479510 MYCBPQ99417 103 aaPredicted RBP26■■□□□ 1.75
SYNGAP1-206ENST00000479510 PCDH9Q9HC56 1237 aa26■■□□□ 1.75
SYNGAP1-206ENST00000479510 TBK1Q9UHD2 729 aa26■■□□□ 1.75
SYNGAP1-206ENST00000479510 PCDHGC3Q9UN70 934 aa26■■□□□ 1.75
SYNGAP1-206ENST00000479510 ALOX15BO15296 676 aa26■■□□□ 1.75
SYNGAP1-206ENST00000479510 EIF4BP23588 611 aaKnown RBP26■■□□□ 1.75
SYNGAP1-206ENST00000479510 ARSEP51690 589 aa26■■□□□ 1.75
SYNGAP1-206ENST00000479510 SP2Q02086 613 aa26■■□□□ 1.75
SYNGAP1-206ENST00000479510 TARBP2Q15633 366 aaKnown RBP26■■□□□ 1.75
SYNGAP1-206ENST00000479510 TFDP3Q5H9I0 405 aa26■■□□□ 1.75
SYNGAP1-206ENST00000479510 PPP1R15BQ5SWA1 713 aa26■■□□□ 1.75
SYNGAP1-206ENST00000479510 FAM118BQ9BPY3 351 aa26■■□□□ 1.75
SYNGAP1-206ENST00000479510 HOXC10Q9NYD6 342 aa26■■□□□ 1.75
SYNGAP1-206ENST00000479510 FETUBQ9UGM5 382 aa26■■□□□ 1.75
SYNGAP1-206ENST00000479510 SLC24A2Q9UI40 661 aa26■■□□□ 1.75
SYNGAP1-206ENST00000479510 DOCK5Q9H7D0 1870 aa25.99■■□□□ 1.75
SYNGAP1-206ENST00000479510 hCG_1818297A0A087WSY0 165 aa25.99■■□□□ 1.75
SYNGAP1-206ENST00000479510 EGFRP00533 1210 aa25.99■■□□□ 1.75
SYNGAP1-206ENST00000479510 ZNF252P-AS1Q0IIN9 211 aa25.99■■□□□ 1.75
SYNGAP1-206ENST00000479510 TMED2Q15363 201 aa25.99■■□□□ 1.75
SYNGAP1-206ENST00000479510 PCGF5Q86SE9 256 aa25.99■■□□□ 1.75
SYNGAP1-206ENST00000479510 CHST13Q8NET6 341 aa25.99■■□□□ 1.75
SYNGAP1-206ENST00000479510 FHDC1Q9C0D6 1143 aaPredicted RBP25.99■■□□□ 1.75
SYNGAP1-206ENST00000479510 NIF3L1Q9GZT8 377 aa25.99■■□□□ 1.75
SYNGAP1-206ENST00000479510 HACL1Q9UJ83 578 aa25.99■■□□□ 1.75
SYNGAP1-206ENST00000479510 MCM8Q9UJA3 840 aa25.99■■□□□ 1.75
SYNGAP1-206ENST00000479510 IVNS1ABPQ9Y6Y0 642 aa25.99■■□□□ 1.75
SYNGAP1-206ENST00000479510 LOC285556D6RIA3 1793 aa25.99■■□□□ 1.75
SYNGAP1-206ENST00000479510 ALADP13716 330 aa25.99■■□□□ 1.75
SYNGAP1-206ENST00000479510 ATF7P17544 494 aaPredicted RBP25.99■■□□□ 1.75
SYNGAP1-206ENST00000479510 HMGCS2P54868 508 aa25.99■■□□□ 1.75
SYNGAP1-206ENST00000479510 SGSM1Q2NKQ1 1148 aa25.99■■□□□ 1.75
SYNGAP1-206ENST00000479510 CYP4F22Q6NT55 531 aa25.99■■□□□ 1.75
SYNGAP1-206ENST00000479510 DCUN1D2Q6PH85 259 aa25.99■■□□□ 1.75
SYNGAP1-206ENST00000479510 TBC1D1Q86TI0 1168 aaPredicted RBP25.99■■□□□ 1.75
SYNGAP1-206ENST00000479510 STRIP2Q9ULQ0 834 aa25.99■■□□□ 1.75
SYNGAP1-206ENST00000479510 STARD13Q9Y3M8 1113 aa25.99■■□□□ 1.75
SYNGAP1-206ENST00000479510 ASMTLO95671 621 aa25.98■■□□□ 1.75
SYNGAP1-206ENST00000479510 KRT10P13645 584 aa25.98■■□□□ 1.75
SYNGAP1-206ENST00000479510 GPS1Q13098 491 aa25.98■■□□□ 1.75
SYNGAP1-206ENST00000479510 RNASEH2BQ5TBB1 312 aaKnown RBP25.98■■□□□ 1.75
SYNGAP1-206ENST00000479510 CENPUQ71F23 418 aa25.98■■□□□ 1.75
SYNGAP1-206ENST00000479510 DENND1AQ8TEH3 1009 aa25.98■■□□□ 1.75
SYNGAP1-206ENST00000479510 MCEEQ96PE7 176 aa25.98■■□□□ 1.75
SYNGAP1-206ENST00000479510 MLXIPLQ9NP71 852 aa25.98■■□□□ 1.75
SYNGAP1-206ENST00000479510 CEP83Q9Y592 693 aa25.98■■□□□ 1.75
SYNGAP1-206ENST00000479510 PI4K2BG5E9Z4 385 aa25.97■■□□□ 1.75
SYNGAP1-206ENST00000479510 TOM1L1O75674 476 aa25.97■■□□□ 1.75
SYNGAP1-206ENST00000479510 GCAP28676 217 aa25.97■■□□□ 1.75
SYNGAP1-206ENST00000479510 CDKN2BP42772 138 aa25.97■■□□□ 1.75
SYNGAP1-206ENST00000479510 ZFYVE27Q5T4F4 411 aa25.97■■□□□ 1.75
SYNGAP1-206ENST00000479510 CEP57Q86XR8 500 aa25.97■■□□□ 1.75
SYNGAP1-206ENST00000479510 TCP11Q8WWU5 503 aa25.97■■□□□ 1.75
SYNGAP1-206ENST00000479510 MRPL4Q9BYD3 311 aaKnown RBP25.97■■□□□ 1.75
SYNGAP1-206ENST00000479510 SSU72Q9NP77 194 aaKnown RBP25.97■■□□□ 1.75
SYNGAP1-206ENST00000479510 SSC5DA1L4H1 1573 aa25.97■■□□□ 1.75
SYNGAP1-206ENST00000479510 FAM189A1O60320 539 aa25.97■■□□□ 1.75
SYNGAP1-206ENST00000479510 CCNB1P14635 433 aa25.97■■□□□ 1.75
SYNGAP1-206ENST00000479510 PECAM1P16284 738 aaPredicted RBP25.97■■□□□ 1.75
SYNGAP1-206ENST00000479510 YWHAEP62258 255 aaKnown RBP25.97■■□□□ 1.75
SYNGAP1-206ENST00000479510 CAPSQ13938 189 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms