RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 SLC4A11Q8NBS3 891 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 CCDC26Q8TAB7 109 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.47□□□□□ -0.73
RAD51B-208ENST00000479335 FEZF2Q8TBJ5 459 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 WHAMMQ8TF30 809 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 TMEM40Q8WWA1 233 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 RNPC3Q96LT9 517 aaKnown RBP10.47□□□□□ -0.73
RAD51B-208ENST00000479335 DNAI2Q9GZS0 605 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 SDCBP2Q9H190 292 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 XPNPEP3Q9NQH7 507 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 GDF3Q9NR23 364 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 CREBZFQ9NS37 354 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 WDR35Q9P2L0 1181 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 SRRDQ9UH36 339 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 IP6K2Q9UHH9 426 aa10.47□□□□□ -0.73
RAD51B-208ENST00000479335 PIN4Q9Y237 131 aaKnown RBP10.47□□□□□ -0.73
RAD51B-208ENST00000479335 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.47□□□□□ -0.73
RAD51B-208ENST00000479335 GOLGA6L10A0A0M3HER8 536 aa10.46□□□□□ -0.74
RAD51B-208ENST00000479335 A0A0U1RQG5 324 aaPredicted RBP10.46□□□□□ -0.74
RAD51B-208ENST00000479335 TMEM110-MUSTN1A8MSY1 372 aa10.46□□□□□ -0.74
RAD51B-208ENST00000479335 RECQL4O94761 1208 aa10.46□□□□□ -0.74
RAD51B-208ENST00000479335 SEC31AO94979 1220 aaKnown RBP10.46□□□□□ -0.74
RAD51B-208ENST00000479335 PGK1P00558 417 aa10.46□□□□□ -0.74
RAD51B-208ENST00000479335 FGGP02679 453 aa10.46□□□□□ -0.74
RAD51B-208ENST00000479335 HMGCRP04035 888 aa10.46□□□□□ -0.74
RAD51B-208ENST00000479335 BRD2P25440 801 aaKnown RBP10.46□□□□□ -0.74
RAD51B-208ENST00000479335 PNPLA4P41247 253 aa10.46□□□□□ -0.74
RAD51B-208ENST00000479335 ZNF394Q53GI3 561 aa10.46□□□□□ -0.74
RAD51B-208ENST00000479335 DCAF12L1Q5VU92 463 aa10.46□□□□□ -0.74
RAD51B-208ENST00000479335 CCSAPQ6IQ19 270 aaPredicted RBP10.46□□□□□ -0.74
RAD51B-208ENST00000479335 CXCL17Q6UXB2 119 aa10.46□□□□□ -0.74
RAD51B-208ENST00000479335 SCARA5Q6ZMJ2 495 aa10.46□□□□□ -0.74
RAD51B-208ENST00000479335 MMS22LQ6ZRQ5 1243 aa10.46□□□□□ -0.74
RAD51B-208ENST00000479335 UNC93AQ86WB7 457 aa10.46□□□□□ -0.74
RAD51B-208ENST00000479335 HACE1Q8IYU2 909 aa10.46□□□□□ -0.74
RAD51B-208ENST00000479335 WDTC1Q8N5D0 677 aa10.46□□□□□ -0.74
RAD51B-208ENST00000479335 MAIP1Q8WWC4 291 aa10.46□□□□□ -0.74
RAD51B-208ENST00000479335 TFAP2BQ92481 460 aa10.46□□□□□ -0.74
RAD51B-208ENST00000479335 ALG3Q92685 438 aa10.46□□□□□ -0.74
RAD51B-208ENST00000479335 RUNDC3BQ96NL0 473 aa10.46□□□□□ -0.74
RAD51B-208ENST00000479335 KRT12Q99456 494 aa10.46□□□□□ -0.74
RAD51B-208ENST00000479335 C11orf70Q9BRQ4 267 aa10.46□□□□□ -0.74
RAD51B-208ENST00000479335 MIS12Q9H081 205 aa10.46□□□□□ -0.74
RAD51B-208ENST00000479335 VIPAS39Q9H9C1 493 aa10.46□□□□□ -0.74
RAD51B-208ENST00000479335 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.46□□□□□ -0.74
RAD51B-208ENST00000479335 SMIM28A0A1B0GU29 152 aa10.45□□□□□ -0.74
RAD51B-208ENST00000479335 TCRBV5S1A1TA0A578 114 aa10.45□□□□□ -0.74
RAD51B-208ENST00000479335 TMEM191CA6NGB0 347 aa10.45□□□□□ -0.74
RAD51B-208ENST00000479335 BHMG1C9JSJ3 638 aaPredicted RBP10.45□□□□□ -0.74
RAD51B-208ENST00000479335 PIRO00625 290 aa10.45□□□□□ -0.74
RAD51B-208ENST00000479335 SART1O43290 800 aaKnown RBP10.45□□□□□ -0.74
RAD51B-208ENST00000479335 AOC2O75106 756 aa10.45□□□□□ -0.74
RAD51B-208ENST00000479335 CD19P15391 556 aa10.45□□□□□ -0.74
RAD51B-208ENST00000479335 MAP2K2P36507 400 aa10.45□□□□□ -0.74
RAD51B-208ENST00000479335 GABRB2P47870 512 aa10.45□□□□□ -0.74
RAD51B-208ENST00000479335 CDH8P55286 799 aa10.45□□□□□ -0.74
RAD51B-208ENST00000479335 RNASE9P60153 205 aaKnown RBP10.45□□□□□ -0.74
RAD51B-208ENST00000479335 NNTQ13423 1086 aa10.45□□□□□ -0.74
RAD51B-208ENST00000479335 ZNF268Q14587 947 aaPredicted RBP10.45□□□□□ -0.74
RAD51B-208ENST00000479335 ARHGEF6Q15052 776 aa10.45□□□□□ -0.74
RAD51B-208ENST00000479335 SGO2Q562F6 1265 aa10.45□□□□□ -0.74
RAD51B-208ENST00000479335 MAP3K21Q5TCX8 1036 aa10.45□□□□□ -0.74
RAD51B-208ENST00000479335 GDF6Q6KF10 455 aaPredicted RBP10.45□□□□□ -0.74
RAD51B-208ENST00000479335 EMBQ6PCB8 327 aa10.45□□□□□ -0.74
RAD51B-208ENST00000479335 FAM228AQ86W67 206 aa10.45□□□□□ -0.74
RAD51B-208ENST00000479335 PASD1Q8IV76 773 aa10.45□□□□□ -0.74
RAD51B-208ENST00000479335 KRT222Q8N1A0 295 aa10.45□□□□□ -0.74
RAD51B-208ENST00000479335 C3orf20Q8ND61 904 aa10.45□□□□□ -0.74
RAD51B-208ENST00000479335 PXYLP1Q8TE99 480 aa10.45□□□□□ -0.74
RAD51B-208ENST00000479335 KRT35Q92764 455 aa10.45□□□□□ -0.74
RAD51B-208ENST00000479335 ZMAT2Q96NC0 199 aaKnown RBP10.45□□□□□ -0.74
RAD51B-208ENST00000479335 NT5C1AQ9BXI3 368 aa10.45□□□□□ -0.74
RAD51B-208ENST00000479335 ELOVL4Q9GZR5 314 aa10.45□□□□□ -0.74
RAD51B-208ENST00000479335 ACBD3Q9H3P7 528 aa10.45□□□□□ -0.74
RAD51B-208ENST00000479335 SMYD3Q9H7B4 428 aa10.45□□□□□ -0.74
RAD51B-208ENST00000479335 RNF186Q9NXI6 227 aa10.45□□□□□ -0.74
RAD51B-208ENST00000479335 GDAP2Q9NXN4 497 aa10.45□□□□□ -0.74
RAD51B-208ENST00000479335 CDY2AQ9Y6F7 541 aa10.45□□□□□ -0.74
RAD51B-208ENST00000479335 TRIP11Q15643 1979 aa10.45□□□□□ -0.74
RAD51B-208ENST00000479335 PDCD11Q14690 1871 aaKnown RBP10.45□□□□□ -0.74
RAD51B-208ENST00000479335 GPR182O15218 404 aa10.44□□□□□ -0.74
RAD51B-208ENST00000479335 PSTPIP1O43586 416 aa10.44□□□□□ -0.74
RAD51B-208ENST00000479335 RPS6KA5O75582 802 aa10.44□□□□□ -0.74
RAD51B-208ENST00000479335 HEXIM1O94992 359 aaKnown RBP10.44□□□□□ -0.74
RAD51B-208ENST00000479335 ASGR1P07306 291 aa10.44□□□□□ -0.74
RAD51B-208ENST00000479335 PRKAR2AP13861 404 aaKnown RBP10.44□□□□□ -0.74
RAD51B-208ENST00000479335 EPHB4P54760 987 aa10.44□□□□□ -0.74
RAD51B-208ENST00000479335 GPS2Q13227 327 aa10.44□□□□□ -0.74
RAD51B-208ENST00000479335 DHX34Q14147 1143 aaKnown RBP10.44□□□□□ -0.74
RAD51B-208ENST00000479335 PIGHQ14442 188 aaPredicted RBP10.44□□□□□ -0.74
RAD51B-208ENST00000479335 KCNA10Q16322 511 aa10.44□□□□□ -0.74
RAD51B-208ENST00000479335 PTPROQ16827 1216 aa10.44□□□□□ -0.74
RAD51B-208ENST00000479335 PPP1R15BQ5SWA1 713 aa10.44□□□□□ -0.74
RAD51B-208ENST00000479335 LRRC38Q5VT99 294 aa10.44□□□□□ -0.74
RAD51B-208ENST00000479335 C9orf57Q5W0N0 161 aa10.44□□□□□ -0.74
RAD51B-208ENST00000479335 LCLAT1Q6UWP7 414 aa10.44□□□□□ -0.74
RAD51B-208ENST00000479335 DPH6Q7L8W6 267 aa10.44□□□□□ -0.74
RAD51B-208ENST00000479335 RHOT1Q8IXI2 618 aa10.44□□□□□ -0.74
RAD51B-208ENST00000479335 SMG8Q8ND04 991 aaKnown RBP10.44□□□□□ -0.74
RAD51B-208ENST00000479335 C1orf131Q8NDD1 294 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms