RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 EXTL3O43909 919 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 HIP1RO75146 1068 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 MICAL2O94851 1124 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 ATF2P15336 505 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 UBA7P41226 1012 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 LIMK1P53667 647 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 ARPP19P56211 112 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 FAM193AP78312 1265 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 GABPB1Q06547 395 aaPredicted RBP7.24□□□□□ -1.25
VCP-205ENST00000479300 TEAD2Q15562 447 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 ZNF568Q3ZCX4 644 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 XKR4Q5GH76 650 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 STXBP5Q5T5C0 1151 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 ARL6IP4Q66PJ3 421 aaKnown RBP7.24□□□□□ -1.25
VCP-205ENST00000479300 ALKAL1Q6UXT8 129 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 ANKS3Q6ZW76 656 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 BRAPQ7Z569 592 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.24□□□□□ -1.25
VCP-205ENST00000479300 LONP2Q86WA8 852 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 TMC8Q8IU68 726 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 MFSD6LQ8IWD5 586 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 C4orf32Q8N8J7 132 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 ZSCAN18Q8TBC5 510 aaPredicted RBP7.24□□□□□ -1.25
VCP-205ENST00000479300 IRF7Q92985 503 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 CHFRQ96EP1 664 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 BICD1Q96G01 975 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 ZFYVE19Q96K21 471 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 AK8Q96MA6 479 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 UROC1Q96N76 676 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 IER2Q9BTL4 223 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 ARRDC1-AS1Q9H2J1 176 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 CRISPLD1Q9H336 500 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 TMEM134Q9H6X4 195 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 CYP4F11Q9HBI6 524 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 SLC38A7Q9NVC3 462 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 POLR3BQ9NW08 1133 aaPredicted RBP7.24□□□□□ -1.25
VCP-205ENST00000479300 FBXL5Q9UKA1 691 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 TNFSF13BQ9Y275 285 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 DMXL2Q8TDJ6 3036 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 KIF26AQ9ULI4 1882 aaPredicted RBP7.24□□□□□ -1.25
VCP-205ENST00000479300 MYBPHLA2RUH7 354 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 VPS37CA5D8V6 355 aaPredicted RBP7.23□□□□□ -1.25
VCP-205ENST00000479300 C1QTNF9BB2RNN3 333 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 PRRG1O14668 218 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 GIPC1O14908 333 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 AXIN1O15169 862 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 GABBR2O75899 941 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 TOP3BO95985 862 aaKnown RBP7.23□□□□□ -1.25
VCP-205ENST00000479300 LRG1P02750 347 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 PROS1P07225 676 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 C1QTNF9P0C862 333 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 HARSP12081 509 aaKnown RBP7.23□□□□□ -1.25
VCP-205ENST00000479300 MYL4P12829 197 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 CDK11BP21127 795 aaKnown RBP7.23□□□□□ -1.25
VCP-205ENST00000479300 HOXA6P31267 233 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 ABCD1P33897 745 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 TXLNAP40222 546 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 RAP1GAPP47736 663 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 NPTX2P47972 431 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 PXNP49023 591 aaPredicted RBP7.23□□□□□ -1.25
VCP-205ENST00000479300 TOB1P50616 345 aaPredicted RBP7.23□□□□□ -1.25
VCP-205ENST00000479300 ATP2C1P98194 919 aaPredicted RBP7.23□□□□□ -1.25
VCP-205ENST00000479300 FCHO2Q0JRZ9 810 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 TWF1Q12792 350 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 CCINQ13939 588 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 PLA2G2CQ5R387 149 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 STPG1Q5TH74 334 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 TCEAL6Q6IPX3 200 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 RINT1Q6NUQ1 792 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 RNF19BQ6ZMZ0 732 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 PDZD4Q76G19 769 aaPredicted RBP7.23□□□□□ -1.25
VCP-205ENST00000479300 KBTBD6Q86V97 674 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 WDR5BQ86VZ2 330 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 CREBRFQ8IUR6 639 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 TTC8Q8TAM2 541 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 DEPDC1BQ8WUY9 529 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 TCEAL3Q969E4 200 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 C18orf25Q96B23 403 aaPredicted RBP7.23□□□□□ -1.25
VCP-205ENST00000479300 ACAP3Q96P50 834 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 PLIN2Q99541 437 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 DNAJC25Q9H1X3 360 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 KCND2Q9NZV8 630 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 LARSQ9P2J5 1176 aaKnown RBP7.23□□□□□ -1.25
VCP-205ENST00000479300 NUB1Q9Y5A7 615 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.23□□□□□ -1.25
VCP-205ENST00000479300 SPAG17Q6Q759 2223 aa7.23□□□□□ -1.25
VCP-205ENST00000479300 SETXQ7Z333 2677 aaKnown RBP7.22□□□□□ -1.25
VCP-205ENST00000479300 CCDC66A2RUB6 948 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 PP2D1A8MPX8 630 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 SPECC1L-ADORA2AF8WAN1 911 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 K7ELQ4 463 aaPredicted RBP7.22□□□□□ -1.25
VCP-205ENST00000479300 PODXLO00592 558 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 ABLIM1O14639 778 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 ZNF197O14709 1029 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 ZNF263O14978 683 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 SLC16A4O15374 487 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 XPOTO43592 962 aaKnown RBP7.22□□□□□ -1.25
VCP-205ENST00000479300 TBCAO75347 108 aaKnown RBP7.22□□□□□ -1.25
VCP-205ENST00000479300 FAM13AO94988 1023 aa7.22□□□□□ -1.25
VCP-205ENST00000479300 EPN2O95208 641 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms