RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 FBXL18Q96ME1 805 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 PPP1R9BQ96SB3 815 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 RBCK1Q9BYM8 510 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 GCOM2Q9BZD3 368 aaPredicted RBP7.23□□□□□ -1.25
USP48-208ENST00000479177 SENP6Q9GZR1 1112 aaPredicted RBP7.23□□□□□ -1.25
USP48-208ENST00000479177 PDZD7Q9H5P4 517 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 METTL14Q9HCE5 456 aaKnown RBP7.23□□□□□ -1.25
USP48-208ENST00000479177 PTPRHQ9HD43 1115 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 ARMCX3Q9UH62 379 aaPredicted RBP7.23□□□□□ -1.25
USP48-208ENST00000479177 TNFSF13BQ9Y275 285 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 FRMD4BQ9Y2L6 1034 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 TRPV2Q9Y5S1 764 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 ANK1P16157 1881 aa7.23□□□□□ -1.25
USP48-208ENST00000479177 GOLGA8IPA6NC78 632 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 GOLGA8JA6NMD2 632 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 M0QZ92 97 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 N4BP3O15049 544 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 TEX33O43247 280 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 EXTL3O43909 919 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 FAM189A1O60320 539 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 B4GALT4O60513 344 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 CAND2O75155 1236 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 CSDE1O75534 798 aaKnown RBP7.22□□□□□ -1.25
USP48-208ENST00000479177 ERLIN2O94905 339 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 SGPL1O95470 568 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 TPM3P06753 285 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 TPM2P07951 284 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 CTSHP09668 335 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 COL6A1P12109 1028 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 ARF4P18085 180 aaPredicted RBP7.22□□□□□ -1.25
USP48-208ENST00000479177 FGFR4P22455 802 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 SFPQP23246 707 aaKnown RBP eCLIP7.22□□□□□ -1.25
USP48-208ENST00000479177 EIF4BP23588 611 aaKnown RBP7.22□□□□□ -1.25
USP48-208ENST00000479177 MAPK1P28482 360 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 DEKP35659 375 aaKnown RBP7.22□□□□□ -1.25
USP48-208ENST00000479177 GJA8P48165 433 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 CDK7P50613 346 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 PPP2R3AQ06190 1150 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 CYP24A1Q07973 514 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 RBL2Q08999 1139 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 BFSP1Q12934 665 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 HSP90AA2PQ14568 343 aaPredicted RBP7.22□□□□□ -1.25
USP48-208ENST00000479177 NR1I3Q14994 352 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 SNRNP35Q16560 246 aaKnown RBP7.22□□□□□ -1.25
USP48-208ENST00000479177 ZNF568Q3ZCX4 644 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 FILIP1LQ4L180 1135 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 VWA3BQ502W6 1294 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 ZBTB41Q5SVQ8 909 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 HGSNATQ68CP4 663 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 INTS8Q75QN2 995 aaKnown RBP7.22□□□□□ -1.25
USP48-208ENST00000479177 CATSPER4Q7RTX7 472 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 CBWD2Q8IUF1 395 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 FAM126BQ8IXS8 530 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 GPD1LQ8N335 351 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 PLEKHO2Q8TD55 490 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 DIS3LQ8TF46 1054 aaKnown RBP7.22□□□□□ -1.25
USP48-208ENST00000479177 SLC35C1Q96A29 364 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 MSTO1Q9BUK6 570 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 NOC4LQ9BVI4 516 aaKnown RBP7.22□□□□□ -1.25
USP48-208ENST00000479177 CELF4Q9BZC1 486 aaKnown RBP7.22□□□□□ -1.25
USP48-208ENST00000479177 TRPV6Q9H1D0 765 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 CDT1Q9H211 546 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 VPS16Q9H269 839 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 NDST4Q9H3R1 872 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 PRDM10Q9NQV6 1147 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 AGPAT5Q9NUQ2 364 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 DCTN4Q9UJW0 460 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 AGO2Q9UKV8 859 aaKnown RBP7.22□□□□□ -1.25
USP48-208ENST00000479177 GINS2Q9Y248 185 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.22□□□□□ -1.25
USP48-208ENST00000479177 CDY2AQ9Y6F7 541 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 CEP290O15078 2479 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 CITO14578 2027 aa7.22□□□□□ -1.25
USP48-208ENST00000479177 A0A1W2PQC6 194 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 DLL1O00548 723 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 EIF1AYO14602 144 aaKnown RBP7.21□□□□□ -1.26
USP48-208ENST00000479177 TM4SF5O14894 197 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 OGTO15294 1046 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 CLDN3O15551 220 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 CHRNA1P02708 482 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 TFRCP02786 760 aaKnown RBP7.21□□□□□ -1.26
USP48-208ENST00000479177 TRIM49P0CI25 452 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 TRIM49CP0CI26 452 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 MCF2P10911 925 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 HARSP12081 509 aaKnown RBP7.21□□□□□ -1.26
USP48-208ENST00000479177 KRT13P13646 458 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 EDN3P14138 238 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 HOXA11P31270 313 aaPredicted RBP7.21□□□□□ -1.26
USP48-208ENST00000479177 THPOP40225 353 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 MATR3P43243 847 aaKnown RBP eCLIP7.21□□□□□ -1.26
USP48-208ENST00000479177 ENPEPQ07075 957 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 PTPN21Q16825 1174 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 DCAF4L1Q3SXM0 396 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 DCAF17Q5H9S7 520 aaPredicted RBP7.21□□□□□ -1.26
USP48-208ENST00000479177 C1orf220Q5T0J3 134 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 CRELD2Q6UXH1 353 aaPredicted RBP7.21□□□□□ -1.26
USP48-208ENST00000479177 TMC6Q7Z403 805 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 FAM228AQ86W67 206 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 CREBRFQ8IUR6 639 aa7.21□□□□□ -1.26
USP48-208ENST00000479177 BRSK2Q8IWQ3 736 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms