RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 TMEM74BQ9NUR3 256 aa5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 FOXJ2Q9P0K8 574 aa5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 FRMD4BQ9Y2L6 1034 aa5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 GRIN2BQ13224 1484 aa5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 SNAPC4Q5SXM2 1469 aa5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 SHROOM2Q13796 1616 aa5.12□□□□□ -1.59
CDC42BPA-212ENST00000478573 SETD1BQ9UPS6 1966 aaKnown RBP5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 TRGV11A0A075B6L2 103 aa5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 TCRBV7S2A1N4TA0A589 114 aa5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 MYADML2A6NDP7 307 aa5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 CCDC154A6NI56 674 aa5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 FAM171A2A8MVW0 826 aa5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 KIAA0391O15091 583 aaKnown RBP5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 CTNND1O60716 968 aaKnown RBP5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 HRGP04196 525 aa5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 VAV2P52735 878 aa5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 NOMO3P69849 1222 aa5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 GALEQ14376 348 aa5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 PGS1Q32NB8 556 aa5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 NOMO2Q5JPE7 1267 aa5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 AKNAD1Q5T1N1 836 aa5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 SLC4A10Q6U841 1118 aa5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 SEM1Q6ZVN7 128 aa5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 FITM2Q8N6M3 262 aa5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 SSH3Q8TE77 659 aa5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 HDAC10Q969S8 669 aa5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 TTC17Q96AE7 1141 aa5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 TIFAQ96CG3 184 aa5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 ACO2Q99798 780 aaKnown RBP5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 GSTO2Q9H4Y5 243 aa5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 IL17RBQ9NRM6 502 aa5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 SEMA4GQ9NTN9 838 aa5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 ASB6Q9NWX5 421 aa5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 DDX20Q9UHI6 824 aaKnown RBP5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 CFAP20Q9Y6A4 193 aaKnown RBP5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 SOGA1O94964 1423 aa5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 WRNQ14191 1432 aaPredicted RBP eCLIP5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 SYNJ2O15056 1496 aa5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 RAD54L2Q9Y4B4 1467 aa5.11□□□□□ -1.59
CDC42BPA-212ENST00000478573 LRRC3CA6NJW4 275 aa5.1□□□□□ -1.59
CDC42BPA-212ENST00000478573 ARHGEF11O15085 1522 aa5.1□□□□□ -1.59
CDC42BPA-212ENST00000478573 FXR1P51114 621 aaKnown RBP eCLIP5.1□□□□□ -1.59
CDC42BPA-212ENST00000478573 CACNA2D1P54289 1103 aa5.1□□□□□ -1.59
CDC42BPA-212ENST00000478573 HDAC1Q13547 482 aaPredicted RBP5.1□□□□□ -1.59
CDC42BPA-212ENST00000478573 GAPVD1Q14C86 1478 aa5.1□□□□□ -1.59
CDC42BPA-212ENST00000478573 SEPT2Q15019 361 aa5.1□□□□□ -1.59
CDC42BPA-212ENST00000478573 C3orf36Q3SXR2 165 aa5.1□□□□□ -1.59
CDC42BPA-212ENST00000478573 FRMPD2Q68DX3 1309 aaPredicted RBP5.1□□□□□ -1.59
CDC42BPA-212ENST00000478573 SRGAP1Q7Z6B7 1085 aa5.1□□□□□ -1.59
CDC42BPA-212ENST00000478573 GLCCI1Q86VQ1 547 aa5.1□□□□□ -1.59
CDC42BPA-212ENST00000478573 DENND1CQ8IV53 801 aa5.1□□□□□ -1.59
CDC42BPA-212ENST00000478573 GRAMD1CQ8IYS0 662 aa5.1□□□□□ -1.59
CDC42BPA-212ENST00000478573 TBC1D15Q8TC07 691 aa5.1□□□□□ -1.59
CDC42BPA-212ENST00000478573 CASKIN2Q8WXE0 1202 aa5.1□□□□□ -1.59
CDC42BPA-212ENST00000478573 FUBP1Q96AE4 644 aaKnown RBP5.1□□□□□ -1.59
CDC42BPA-212ENST00000478573 SLC39A13Q96H72 371 aa5.1□□□□□ -1.59
CDC42BPA-212ENST00000478573 PNKPQ96T60 521 aa5.1□□□□□ -1.59
CDC42BPA-212ENST00000478573 TMEM60Q9H2L4 133 aa5.1□□□□□ -1.59
CDC42BPA-212ENST00000478573 MAN1C1Q9NR34 630 aa5.1□□□□□ -1.59
CDC42BPA-212ENST00000478573 KCTD5Q9NXV2 234 aa5.1□□□□□ -1.59
CDC42BPA-212ENST00000478573 HSFX1Q9UBD0 423 aa5.1□□□□□ -1.59
CDC42BPA-212ENST00000478573 INTUQ9ULD6 942 aa5.1□□□□□ -1.59
CDC42BPA-212ENST00000478573 CTTNBP2Q8WZ74 1663 aa5.09□□□□□ -1.59
CDC42BPA-212ENST00000478573 RUSC2Q8N2Y8 1516 aa5.09□□□□□ -1.59
CDC42BPA-212ENST00000478573 SGTAO43765 313 aa5.09□□□□□ -1.59
CDC42BPA-212ENST00000478573 PEX1O43933 1283 aa5.09□□□□□ -1.59
CDC42BPA-212ENST00000478573 TUSC2O75896 110 aa5.09□□□□□ -1.59
CDC42BPA-212ENST00000478573 ZFPL1O95159 310 aa5.09□□□□□ -1.59
CDC42BPA-212ENST00000478573 PHKG2P15735 406 aa5.09□□□□□ -1.59
CDC42BPA-212ENST00000478573 SLC6A9P48067 706 aa5.09□□□□□ -1.59
CDC42BPA-212ENST00000478573 RHBDL3P58872 404 aa5.09□□□□□ -1.59
CDC42BPA-212ENST00000478573 CREMQ03060 361 aa5.09□□□□□ -1.59
CDC42BPA-212ENST00000478573 SF3B3Q15393 1217 aaKnown RBP5.09□□□□□ -1.59
CDC42BPA-212ENST00000478573 KSR2Q6VAB6 950 aa5.09□□□□□ -1.59
CDC42BPA-212ENST00000478573 MIGA2Q7L4E1 593 aa5.09□□□□□ -1.59
CDC42BPA-212ENST00000478573 OVCH2Q7RTZ1 564 aa5.09□□□□□ -1.59
CDC42BPA-212ENST00000478573 ZBTB34Q8NCN2 500 aa5.09□□□□□ -1.59
CDC42BPA-212ENST00000478573 PJA1Q8NG27 643 aa5.09□□□□□ -1.59
CDC42BPA-212ENST00000478573 OR2I1PQ8NGU4 316 aa5.09□□□□□ -1.59
CDC42BPA-212ENST00000478573 SVIPQ8NHG7 77 aa5.09□□□□□ -1.59
CDC42BPA-212ENST00000478573 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.09□□□□□ -1.59
CDC42BPA-212ENST00000478573 FAM204AQ9H8W3 233 aa5.09□□□□□ -1.59
CDC42BPA-212ENST00000478573 SLC17A6Q9P2U8 582 aa5.09□□□□□ -1.59
CDC42BPA-212ENST00000478573 AQRO60306 1485 aaKnown RBP eCLIP5.08□□□□□ -1.68e-7■■■■■ 28.7
CDC42BPA-212ENST00000478573 ANO9A1A5B4 782 aa5.08□□□□□ -1.6
CDC42BPA-212ENST00000478573 A6NNZ2 444 aa5.08□□□□□ -1.6
CDC42BPA-212ENST00000478573 FAM227AF5H4B4 570 aa5.08□□□□□ -1.6
CDC42BPA-212ENST00000478573 ZBED1O96006 694 aa5.08□□□□□ -1.6
CDC42BPA-212ENST00000478573 RPLP2P05387 115 aaKnown RBP5.08□□□□□ -1.6
CDC42BPA-212ENST00000478573 DSC2Q02487 901 aa5.08□□□□□ -1.6
CDC42BPA-212ENST00000478573 MTM1Q13496 603 aa5.08□□□□□ -1.6
CDC42BPA-212ENST00000478573 PPP4R3AQ6IN85 833 aa5.08□□□□□ -1.6
CDC42BPA-212ENST00000478573 ZGPATQ8N5A5 531 aaKnown RBP5.08□□□□□ -1.6
CDC42BPA-212ENST00000478573 NSUN6Q8TEA1 469 aaKnown RBP5.08□□□□□ -1.6
CDC42BPA-212ENST00000478573 NUP133Q8WUM0 1156 aa5.08□□□□□ -1.6
CDC42BPA-212ENST00000478573 TMEM125Q96AQ2 219 aa5.08□□□□□ -1.6
CDC42BPA-212ENST00000478573 C7orf25Q9BPX7 421 aa5.08□□□□□ -1.6
CDC42BPA-212ENST00000478573 MANSC1Q9H8J5 431 aa5.08□□□□□ -1.6
CDC42BPA-212ENST00000478573 FAM30AQ9NZY2 134 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms