RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 KIAA1586Q9HCI6 787 aa5.71□□□□□ -1.5
LMBR1-216ENST00000477983 SLC17A6Q9P2U8 582 aa5.71□□□□□ -1.5
LMBR1-216ENST00000477983 FRMD4BQ9Y2L6 1034 aa5.71□□□□□ -1.5
LMBR1-216ENST00000477983 SPHKAPQ2M3C7 1700 aa5.71□□□□□ -1.5
LMBR1-216ENST00000477983 LRPPRCP42704 1394 aaKnown RBP5.7□□□□□ -1.5
LMBR1-216ENST00000477983 TRPM2O94759 1503 aa5.7□□□□□ -1.5
LMBR1-216ENST00000477983 RBMXL2O75526 392 aaKnown RBP5.7□□□□□ -1.5
LMBR1-216ENST00000477983 CDK4P11802 303 aa5.7□□□□□ -1.5
LMBR1-216ENST00000477983 SLFN5Q08AF3 891 aa5.7□□□□□ -1.5
LMBR1-216ENST00000477983 NLGN4YQ8NFZ3 816 aaPredicted RBP5.7□□□□□ -1.5
LMBR1-216ENST00000477983 PNISRQ8TF01 805 aaKnown RBP5.7□□□□□ -1.5
LMBR1-216ENST00000477983 ANKS1AQ92625 1134 aa5.7□□□□□ -1.5
LMBR1-216ENST00000477983 SLC2A13Q96QE2 648 aa5.7□□□□□ -1.5
LMBR1-216ENST00000477983 PTPRTO14522 1441 aa5.7□□□□□ -1.5
LMBR1-216ENST00000477983 MYBBP1AQ9BQG0 1328 aaKnown RBP5.7□□□□□ -1.5
LMBR1-216ENST00000477983 EFCAB6Q5THR3 1501 aa5.69□□□□□ -1.5
LMBR1-216ENST00000477983 LMTK2Q8IWU2 1503 aa5.69□□□□□ -1.5
LMBR1-216ENST00000477983 BCORL1Q5H9F3 1711 aa5.69□□□□□ -1.5
LMBR1-216ENST00000477983 TCRBV7S2A1N4TA0A589 114 aa5.69□□□□□ -1.5
LMBR1-216ENST00000477983 TRIM75PA6NK02 468 aa5.69□□□□□ -1.5
LMBR1-216ENST00000477983 SRGNP10124 158 aa5.69□□□□□ -1.5
LMBR1-216ENST00000477983 FOLR3P41439 243 aa5.69□□□□□ -1.5
LMBR1-216ENST00000477983 CTXN1P60606 82 aa5.69□□□□□ -1.5
LMBR1-216ENST00000477983 FOXF2Q12947 444 aa5.69□□□□□ -1.5
LMBR1-216ENST00000477983 AMOTL1Q8IY63 956 aa5.69□□□□□ -1.5
LMBR1-216ENST00000477983 ACTRT2Q8TDY3 377 aa5.69□□□□□ -1.5
LMBR1-216ENST00000477983 SSH1Q8WYL5 1049 aa5.69□□□□□ -1.5
LMBR1-216ENST00000477983 MCM8Q9UJA3 840 aa5.69□□□□□ -1.5
LMBR1-216ENST00000477983 RUVBL1Q9Y265 456 aaKnown RBP5.69□□□□□ -1.5
LMBR1-216ENST00000477983 CLTCL1P53675 1640 aa5.69□□□□□ -1.5
LMBR1-216ENST00000477983 RALGAPBQ86X10 1494 aa5.69□□□□□ -1.5
LMBR1-216ENST00000477983 ABCC3O15438 1527 aa5.69□□□□□ -1.5
LMBR1-216ENST00000477983 USP47Q96K76 1375 aa5.68□□□□□ -1.5
LMBR1-216ENST00000477983 UGGT1Q9NYU2 1555 aa5.68□□□□□ -1.5
LMBR1-216ENST00000477983 PRAG1Q86YV5 1406 aa5.68□□□□□ -1.5
LMBR1-216ENST00000477983 A0A1W2PS29 197 aa5.68□□□□□ -1.5
LMBR1-216ENST00000477983 CDHR4A6H8M9 788 aa5.68□□□□□ -1.5
LMBR1-216ENST00000477983 LRRC3CA6NJW4 275 aa5.68□□□□□ -1.5
LMBR1-216ENST00000477983 ATXN1P54253 815 aaKnown RBP5.68□□□□□ -1.5
LMBR1-216ENST00000477983 KRTAP10-11P60412 298 aa5.68□□□□□ -1.5
LMBR1-216ENST00000477983 GEN1Q17RS7 908 aa5.68□□□□□ -1.5
LMBR1-216ENST00000477983 DDX42Q86XP3 938 aaKnown RBP eCLIP5.68□□□□□ -1.5
LMBR1-216ENST00000477983 NGEFQ8N5V2 710 aa5.68□□□□□ -1.5
LMBR1-216ENST00000477983 CNTD1Q8N815 330 aa5.68□□□□□ -1.5
LMBR1-216ENST00000477983 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.68□□□□□ -1.5
LMBR1-216ENST00000477983 TBC1D15Q8TC07 691 aa5.68□□□□□ -1.5
LMBR1-216ENST00000477983 SSH3Q8TE77 659 aa5.68□□□□□ -1.5
LMBR1-216ENST00000477983 ZNF384Q8TF68 577 aa5.68□□□□□ -1.5
LMBR1-216ENST00000477983 NRG4Q8WWG1 115 aa5.68□□□□□ -1.5
LMBR1-216ENST00000477983 TIMP4Q99727 224 aa5.68□□□□□ -1.5
LMBR1-216ENST00000477983 C7orf25Q9BPX7 421 aa5.68□□□□□ -1.5
LMBR1-216ENST00000477983 POLR3GLQ9BT43 218 aa5.68□□□□□ -1.5
LMBR1-216ENST00000477983 KLK15Q9H2R5 256 aa5.68□□□□□ -1.5
LMBR1-216ENST00000477983 CFAP65Q6ZU64 1925 aaKnown RBP5.68□□□□□ -1.5
LMBR1-216ENST00000477983 LAMC1P11047 1609 aa5.67□□□□□ -1.5
LMBR1-216ENST00000477983 CAMSAP1Q5T5Y3 1602 aa5.67□□□□□ -1.5
LMBR1-216ENST00000477983 NPATQ14207 1427 aa5.67□□□□□ -1.5
LMBR1-216ENST00000477983 COL3A1P02461 1466 aaPredicted RBP5.67□□□□□ -1.5
LMBR1-216ENST00000477983 PROM1O43490 865 aa5.67□□□□□ -1.5
LMBR1-216ENST00000477983 PEX1O43933 1283 aa5.67□□□□□ -1.5
LMBR1-216ENST00000477983 FCER1AP12319 257 aa5.67□□□□□ -1.5
LMBR1-216ENST00000477983 CLUL1Q15846 466 aa5.67□□□□□ -1.5
LMBR1-216ENST00000477983 ATP2B3Q16720 1220 aa5.67□□□□□ -1.5
LMBR1-216ENST00000477983 VWA1Q6PCB0 445 aa5.67□□□□□ -1.5
LMBR1-216ENST00000477983 ARHGEF25Q86VW2 580 aa5.67□□□□□ -1.5
LMBR1-216ENST00000477983 SRRM1Q8IYB3 904 aaKnown RBP5.67□□□□□ -1.5
LMBR1-216ENST00000477983 PPM1NQ8N819 430 aa5.67□□□□□ -1.5
LMBR1-216ENST00000477983 DPF2Q92785 391 aa5.67□□□□□ -1.5
LMBR1-216ENST00000477983 NAF1Q96HR8 494 aaKnown RBP5.67□□□□□ -1.5
LMBR1-216ENST00000477983 PUS7LQ9H0K6 701 aaKnown RBP5.67□□□□□ -1.5
LMBR1-216ENST00000477983 C11orf54Q9H0W9 315 aaPredicted RBP5.67□□□□□ -1.5
LMBR1-216ENST00000477983 SLC5A4Q9NY91 659 aa5.67□□□□□ -1.5
LMBR1-216ENST00000477983 KIF1BO60333 1816 aa5.67□□□□□ -1.5
LMBR1-216ENST00000477983 TRPM1Q7Z4N2 1603 aa5.66□□□□□ -1.5
LMBR1-216ENST00000477983 SETD1BQ9UPS6 1966 aaKnown RBP5.66□□□□□ -1.5
LMBR1-216ENST00000477983 TRGV11A0A075B6L2 103 aa5.66□□□□□ -1.5
LMBR1-216ENST00000477983 KIAA0391O15091 583 aaKnown RBP5.66□□□□□ -1.5
LMBR1-216ENST00000477983 MPPED1O15442 326 aa5.66□□□□□ -1.5
LMBR1-216ENST00000477983 HAUS5O94927 633 aa5.66□□□□□ -1.5
LMBR1-216ENST00000477983 SLC6A4P31645 630 aa5.66□□□□□ -1.5
LMBR1-216ENST00000477983 CREMQ03060 361 aa5.66□□□□□ -1.5
LMBR1-216ENST00000477983 SF3B3Q15393 1217 aaKnown RBP5.66□□□□□ -1.5
LMBR1-216ENST00000477983 INAVAQ3KP66 663 aa5.66□□□□□ -1.5
LMBR1-216ENST00000477983 NECAB2Q7Z6G3 386 aa5.66□□□□□ -1.5
LMBR1-216ENST00000477983 RHOT1Q8IXI2 618 aa5.66□□□□□ -1.5
LMBR1-216ENST00000477983 CBARPQ8N350 705 aaPredicted RBP5.66□□□□□ -1.5
LMBR1-216ENST00000477983 DCBLD1Q8N8Z6 715 aa5.66□□□□□ -1.5
LMBR1-216ENST00000477983 HEPHQ9BQS7 1158 aa5.66□□□□□ -1.5
LMBR1-216ENST00000477983 ARPP21Q9UBL0 812 aaPredicted RBP5.66□□□□□ -1.5
LMBR1-216ENST00000477983 INTUQ9ULD6 942 aa5.66□□□□□ -1.5
LMBR1-216ENST00000477983 PRAMEF33A0A0G2JMD5 474 aa5.65□□□□□ -1.5
LMBR1-216ENST00000477983 CCDC151A5D8V7 595 aa5.65□□□□□ -1.5
LMBR1-216ENST00000477983 PRAMEF10O60809 474 aa5.65□□□□□ -1.5
LMBR1-216ENST00000477983 WT1P19544 449 aaPredicted RBP5.65□□□□□ -1.5
LMBR1-216ENST00000477983 RRP1P56182 461 aaKnown RBP5.65□□□□□ -1.5
LMBR1-216ENST00000477983 IRX6P78412 446 aaPredicted RBP5.65□□□□□ -1.5
LMBR1-216ENST00000477983 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.65□□□□□ -1.5
LMBR1-216ENST00000477983 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.65□□□□□ -1.5
LMBR1-216ENST00000477983 C1orf162Q8NEQ5 155 aaPredicted RBP5.65□□□□□ -1.5
LMBR1-216ENST00000477983 IL17RDQ8NFM7 739 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms