RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 TRDMT1O14717 391 aaKnown RBP22.04■■□□□ 1.12
PDLIM1-202ENST00000477757 SOAT2O75908 522 aa22.04■■□□□ 1.12
PDLIM1-202ENST00000477757 CCT6AP40227 531 aaKnown RBP22.04■■□□□ 1.12
PDLIM1-202ENST00000477757 CYP4F8P98187 520 aa22.04■■□□□ 1.12
PDLIM1-202ENST00000477757 TRIM29Q14134 588 aa22.04■■□□□ 1.12
PDLIM1-202ENST00000477757 KARSQ15046 597 aaKnown RBP22.04■■□□□ 1.12
PDLIM1-202ENST00000477757 TMEM130Q8N3G9 435 aa22.04■■□□□ 1.12
PDLIM1-202ENST00000477757 HHIPQ96QV1 700 aa22.04■■□□□ 1.12
PDLIM1-202ENST00000477757 FAM83CQ9BQN1 747 aa22.04■■□□□ 1.12
PDLIM1-202ENST00000477757 HPS4Q9NQG7 708 aa22.04■■□□□ 1.12
PDLIM1-202ENST00000477757 ANKFY1Q9P2R3 1169 aa22.04■■□□□ 1.12
PDLIM1-202ENST00000477757 RBM19Q9Y4C8 960 aaKnown RBP22.04■■□□□ 1.12
PDLIM1-202ENST00000477757 ITPR1Q14643 2758 aa22.04■■□□□ 1.12
PDLIM1-202ENST00000477757 TSC2P49815 1807 aa22.03■■□□□ 1.12
PDLIM1-202ENST00000477757 NBEAQ8NFP9 2946 aa22.03■■□□□ 1.12
PDLIM1-202ENST00000477757 DMXL2Q8TDJ6 3036 aa22.03■■□□□ 1.12
PDLIM1-202ENST00000477757 LNP1A1A4G5 178 aa22.03■■□□□ 1.12
PDLIM1-202ENST00000477757 C4orf47A7E2U8 309 aa22.03■■□□□ 1.12
PDLIM1-202ENST00000477757 RNF40O75150 1001 aa22.03■■□□□ 1.12
PDLIM1-202ENST00000477757 TOM1L1O75674 476 aa22.03■■□□□ 1.12
PDLIM1-202ENST00000477757 LARGE1O95461 756 aa22.03■■□□□ 1.12
PDLIM1-202ENST00000477757 CDC25CP30307 473 aa22.03■■□□□ 1.12
PDLIM1-202ENST00000477757 FOSBP53539 338 aa22.03■■□□□ 1.12
PDLIM1-202ENST00000477757 SEZ6Q53EL9 994 aa22.03■■□□□ 1.12
PDLIM1-202ENST00000477757 DAB2IPQ5VWQ8 1189 aa22.03■■□□□ 1.12
PDLIM1-202ENST00000477757 OVOS1Q6IE37 1185 aa22.03■■□□□ 1.12
PDLIM1-202ENST00000477757 NSUN7Q8NE18 718 aaKnown RBP22.03■■□□□ 1.12
PDLIM1-202ENST00000477757 GTF3C6Q969F1 213 aa22.03■■□□□ 1.12
PDLIM1-202ENST00000477757 ZBTB45Q96K62 511 aaPredicted RBP22.03■■□□□ 1.12
PDLIM1-202ENST00000477757 DRC1Q96MC2 740 aa22.03■■□□□ 1.12
PDLIM1-202ENST00000477757 SMG9Q9H0W8 520 aaKnown RBP22.03■■□□□ 1.12
PDLIM1-202ENST00000477757 IL21Q9HBE4 155 aa22.03■■□□□ 1.12
PDLIM1-202ENST00000477757 BCLAF3A2AJT9 711 aaKnown RBP22.02■■□□□ 1.12
PDLIM1-202ENST00000477757 HIP1RO75146 1068 aa22.02■■□□□ 1.12
PDLIM1-202ENST00000477757 RHOBTB1O94844 696 aa22.02■■□□□ 1.12
PDLIM1-202ENST00000477757 CAVIN2O95810 425 aa22.02■■□□□ 1.12
PDLIM1-202ENST00000477757 CXCL8P10145 99 aa22.02■■□□□ 1.12
PDLIM1-202ENST00000477757 TYMPP19971 482 aa22.02■■□□□ 1.12
PDLIM1-202ENST00000477757 CREB5Q02930 508 aa22.02■■□□□ 1.12
PDLIM1-202ENST00000477757 MAPK7Q13164 816 aa22.02■■□□□ 1.12
PDLIM1-202ENST00000477757 RUNX3Q13761 415 aa22.02■■□□□ 1.12
PDLIM1-202ENST00000477757 SH3PXD2AQ5TCZ1 1133 aa22.02■■□□□ 1.12
PDLIM1-202ENST00000477757 NECAB1Q8N987 351 aa22.02■■□□□ 1.12
PDLIM1-202ENST00000477757 GATA6Q92908 595 aa22.02■■□□□ 1.12
PDLIM1-202ENST00000477757 GCNAQ96QF7 691 aa22.02■■□□□ 1.12
PDLIM1-202ENST00000477757 PLEKHA5Q9HAU0 1116 aa22.02■■□□□ 1.12
PDLIM1-202ENST00000477757 GKN1Q9NS71 199 aa22.02■■□□□ 1.12
PDLIM1-202ENST00000477757 DDX19AQ9NUU7 478 aaKnown RBP22.02■■□□□ 1.12
PDLIM1-202ENST00000477757 POLR3BQ9NW08 1133 aaPredicted RBP22.02■■□□□ 1.12
PDLIM1-202ENST00000477757 KIAA1024Q9UPX6 916 aa22.02■■□□□ 1.12
PDLIM1-202ENST00000477757 OTOL1A6NHN0 477 aaPredicted RBP22.01■■□□□ 1.11
PDLIM1-202ENST00000477757 EGFP01133 1207 aa22.01■■□□□ 1.11
PDLIM1-202ENST00000477757 SPINK2P20155 84 aa22.01■■□□□ 1.11
PDLIM1-202ENST00000477757 ANKRD1Q15327 319 aa22.01■■□□□ 1.11
PDLIM1-202ENST00000477757 LPIN3Q9BQK8 851 aa22.01■■□□□ 1.11
PDLIM1-202ENST00000477757 C17orf75Q9HAS0 396 aa22.01■■□□□ 1.11
PDLIM1-202ENST00000477757 ZMYM5Q9UJ78 669 aa22.01■■□□□ 1.11
PDLIM1-202ENST00000477757 UBQLN1Q9UMX0 589 aaKnown RBP22.01■■□□□ 1.11
PDLIM1-202ENST00000477757 TTC26A0AVF1 554 aa22■■□□□ 1.11
PDLIM1-202ENST00000477757 SLC16A4O15374 487 aa22■■□□□ 1.11
PDLIM1-202ENST00000477757 ATF6P18850 670 aa22■■□□□ 1.11
PDLIM1-202ENST00000477757 CYP3A5P20815 502 aa22■■□□□ 1.11
PDLIM1-202ENST00000477757 CSRP1P21291 193 aaKnown RBP22■■□□□ 1.11
PDLIM1-202ENST00000477757 FXR2P51116 673 aaKnown RBP eCLIP22■■□□□ 1.11
PDLIM1-202ENST00000477757 SPAG1Q07617 926 aa22■■□□□ 1.11
PDLIM1-202ENST00000477757 MCL1Q07820 350 aa22■■□□□ 1.11
PDLIM1-202ENST00000477757 STRN3Q13033 797 aa22■■□□□ 1.11
PDLIM1-202ENST00000477757 VEPH1Q14D04 833 aa22■■□□□ 1.11
PDLIM1-202ENST00000477757 ZBTB6Q15916 424 aa22■■□□□ 1.11
PDLIM1-202ENST00000477757 DSTYKQ6XUX3 929 aa22■■□□□ 1.11
PDLIM1-202ENST00000477757 CMTM8Q8IZV2 173 aa22■■□□□ 1.11
PDLIM1-202ENST00000477757 KIF12Q96FN5 646 aa22■■□□□ 1.11
PDLIM1-202ENST00000477757 RUSC1Q9BVN2 902 aa22■■□□□ 1.11
PDLIM1-202ENST00000477757 SLC46A2Q9BY10 475 aa22■■□□□ 1.11
PDLIM1-202ENST00000477757 EBF3Q9H4W6 596 aa22■■□□□ 1.11
PDLIM1-202ENST00000477757 EBF1Q9UH73 591 aa22■■□□□ 1.11
PDLIM1-202ENST00000477757 SRRM3A6NNA2 597 aaPredicted RBP21.99■■□□□ 1.11
PDLIM1-202ENST00000477757 DCLK1O15075 740 aa21.99■■□□□ 1.11
PDLIM1-202ENST00000477757 JAK2O60674 1132 aa21.99■■□□□ 1.11
PDLIM1-202ENST00000477757 APBB3O95704 486 aa21.99■■□□□ 1.11
PDLIM1-202ENST00000477757 CEACAM1P13688 526 aa21.99■■□□□ 1.11
PDLIM1-202ENST00000477757 DRD1P21728 446 aa21.99■■□□□ 1.11
PDLIM1-202ENST00000477757 AMPD2Q01433 879 aa21.99■■□□□ 1.11
PDLIM1-202ENST00000477757 ZNF174Q15697 407 aa21.99■■□□□ 1.11
PDLIM1-202ENST00000477757 ME3Q16798 604 aa21.99■■□□□ 1.11
PDLIM1-202ENST00000477757 FBXO43Q4G163 708 aa21.99■■□□□ 1.11
PDLIM1-202ENST00000477757 TRIM68Q6AZZ1 485 aa21.99■■□□□ 1.11
PDLIM1-202ENST00000477757 ARMCX5Q6P1M9 558 aa21.99■■□□□ 1.11
PDLIM1-202ENST00000477757 ZPBP2Q6X784 338 aa21.99■■□□□ 1.11
PDLIM1-202ENST00000477757 SYT13Q7L8C5 426 aa21.99■■□□□ 1.11
PDLIM1-202ENST00000477757 OR10T2Q8NGX3 314 aa21.99■■□□□ 1.11
PDLIM1-202ENST00000477757 SEPT5Q99719 369 aaPredicted RBP21.99■■□□□ 1.11
PDLIM1-202ENST00000477757 LRWD1Q9UFC0 647 aa21.99■■□□□ 1.11
PDLIM1-202ENST00000477757 KIAA1549LQ6ZVL6 1849 aa21.99■■□□□ 1.11
PDLIM1-202ENST00000477757 TOP3BO95985 862 aaKnown RBP21.98■■□□□ 1.11
PDLIM1-202ENST00000477757 CLTAP09496 248 aa21.98■■□□□ 1.11
PDLIM1-202ENST00000477757 ODC1P11926 461 aa21.98■■□□□ 1.11
PDLIM1-202ENST00000477757 TUFMP49411 452 aaKnown RBP21.98■■□□□ 1.11
PDLIM1-202ENST00000477757 NTPCRQ9BSD7 190 aaKnown RBP21.98■■□□□ 1.11
PDLIM1-202ENST00000477757 KIF9Q9HAQ2 790 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms