RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 TGM5O43548 720 aa12.51□□□□□ -0.41
LSM2-212ENST00000477182 DDHD2O94830 711 aa12.51□□□□□ -0.41
LSM2-212ENST00000477182 NR3C1P04150 777 aa12.51□□□□□ -0.41
LSM2-212ENST00000477182 HARSP12081 509 aaKnown RBP12.51□□□□□ -0.41
LSM2-212ENST00000477182 ADSSP30520 456 aa12.51□□□□□ -0.41
LSM2-212ENST00000477182 AXLP30530 894 aa12.51□□□□□ -0.41
LSM2-212ENST00000477182 HOXA11P31270 313 aaPredicted RBP12.51□□□□□ -0.41
LSM2-212ENST00000477182 CYP2J2P51589 502 aa12.51□□□□□ -0.41
LSM2-212ENST00000477182 DSG1Q02413 1049 aa12.51□□□□□ -0.41
LSM2-212ENST00000477182 CREMQ03060 361 aa12.51□□□□□ -0.41
LSM2-212ENST00000477182 LRRC63Q05C16 580 aa12.51□□□□□ -0.41
LSM2-212ENST00000477182 NCBP1Q09161 790 aaKnown RBP12.51□□□□□ -0.41
LSM2-212ENST00000477182 TPD52L1Q16890 204 aaPredicted RBP12.51□□□□□ -0.41
LSM2-212ENST00000477182 ZNF568Q3ZCX4 644 aa12.51□□□□□ -0.41
LSM2-212ENST00000477182 AASDHQ4L235 1098 aaPredicted RBP12.51□□□□□ -0.41
LSM2-212ENST00000477182 ARMCX5Q6P1M9 558 aa12.51□□□□□ -0.41
LSM2-212ENST00000477182 GAS2L3Q86XJ1 694 aa12.51□□□□□ -0.41
LSM2-212ENST00000477182 PALB2Q86YC2 1186 aa12.51□□□□□ -0.41
LSM2-212ENST00000477182 DHX40Q8IX18 779 aaKnown RBP12.51□□□□□ -0.41
LSM2-212ENST00000477182 GPR65Q8IYL9 337 aa12.51□□□□□ -0.41
LSM2-212ENST00000477182 GOLGA5Q8TBA6 731 aa12.51□□□□□ -0.41
LSM2-212ENST00000477182 ENOX1Q8TC92 643 aaKnown RBP12.51□□□□□ -0.41
LSM2-212ENST00000477182 POMGNT1Q8WZA1 660 aa12.51□□□□□ -0.41
LSM2-212ENST00000477182 EEF2KMTQ96G04 330 aa12.51□□□□□ -0.41
LSM2-212ENST00000477182 BPIFA3Q9BQP9 254 aa12.51□□□□□ -0.41
LSM2-212ENST00000477182 CBWD1Q9BRT8 395 aa12.51□□□□□ -0.41
LSM2-212ENST00000477182 TCHPQ9BT92 498 aa12.51□□□□□ -0.41
LSM2-212ENST00000477182 HAPLN2Q9GZV7 340 aa12.51□□□□□ -0.41
LSM2-212ENST00000477182 CHRDQ9H2X0 955 aa12.51□□□□□ -0.41
LSM2-212ENST00000477182 PCIF1Q9H4Z3 704 aa12.51□□□□□ -0.41
LSM2-212ENST00000477182 PDZD7Q9H5P4 517 aa12.51□□□□□ -0.41
LSM2-212ENST00000477182 CGNQ9P2M7 1197 aaKnown RBP12.51□□□□□ -0.41
LSM2-212ENST00000477182 TRAF3IP3Q9Y228 551 aa12.51□□□□□ -0.41
LSM2-212ENST00000477182 TNFSF13BQ9Y275 285 aa12.51□□□□□ -0.41
LSM2-212ENST00000477182 A0A1B0GUA9 196 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 MEIS3P2A8K0S8 358 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 C1QTNF9BB2RNN3 333 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 MAN2B1O00754 1011 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 ABLIM1O14639 778 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 CLDN3O15551 220 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 B4GALT3O60512 393 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 TOM1L1O75674 476 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 ZMYND10O75800 440 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 CAVIN2O95810 425 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 HNRNPA1P09651 372 aaKnown RBP eCLIP12.5□□□□□ -0.41
LSM2-212ENST00000477182 C1QTNF9P0C862 333 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 GARTP22102 1010 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 PROZP22891 400 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 NR2F2P24468 414 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 SNRPFP62306 86 aaKnown RBP12.5□□□□□ -0.41
LSM2-212ENST00000477182 MYL5Q02045 173 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 FZD5Q13467 585 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 NOLC1Q14978 699 aaKnown RBP eCLIP12.5□□□□□ -0.411e-7■□□□□ 11
LSM2-212ENST00000477182 IQCB1Q15051 598 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 EDRF1Q3B7T1 1238 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 SPATA1Q5VX52 437 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 SLFN12LQ6IEE8 588 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 NOTUMQ6P988 496 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 LILRA6Q6PI73 481 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 FOXR2Q6PJQ5 311 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 MPZL3Q6UWV2 235 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 GRASPQ7Z6J2 395 aaPredicted RBP12.5□□□□□ -0.41
LSM2-212ENST00000477182 LUZP1Q86V48 1076 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 RNF168Q8IYW5 571 aaPredicted RBP12.5□□□□□ -0.41
LSM2-212ENST00000477182 CSGALNACT2Q8N6G5 542 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 C12orf50Q8NA57 414 aaPredicted RBP12.5□□□□□ -0.41
LSM2-212ENST00000477182 RNF214Q8ND24 703 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 ZSWIM2Q8NEG5 633 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 FAM200AQ8TCP9 573 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 NOC3LQ8WTT2 800 aaKnown RBP12.5□□□□□ -0.41
LSM2-212ENST00000477182 FGF13Q92913 245 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 MSTO1Q9BUK6 570 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 CDT1Q9H211 546 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 RSAD1Q9HA92 442 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 PTPRHQ9HD43 1115 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 HSPBP1Q9NZL4 362 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 FNIP2Q9P278 1114 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 STYXL1Q9Y6J8 313 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 PDCD11Q14690 1871 aaKnown RBP12.5□□□□□ -0.41
LSM2-212ENST00000477182 GREB1Q4ZG55 1949 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 DOCK6Q96HP0 2047 aa12.5□□□□□ -0.41
LSM2-212ENST00000477182 A0A0B4J269 797 aa12.49□□□□□ -0.41
LSM2-212ENST00000477182 GOLGA8IPA6NC78 632 aa12.49□□□□□ -0.41
LSM2-212ENST00000477182 GOLGA8JA6NMD2 632 aa12.49□□□□□ -0.41
LSM2-212ENST00000477182 SMTNL1A8MU46 457 aa12.49□□□□□ -0.41
LSM2-212ENST00000477182 BECN2A8MW95 431 aa12.49□□□□□ -0.41
LSM2-212ENST00000477182 IKBKBO14920 756 aa12.49□□□□□ -0.41
LSM2-212ENST00000477182 NPTXRO95502 500 aa12.49□□□□□ -0.41
LSM2-212ENST00000477182 RPL13P26373 211 aaKnown RBP12.49□□□□□ -0.41
LSM2-212ENST00000477182 FKBP3Q00688 224 aaKnown RBP12.49□□□□□ -0.41
LSM2-212ENST00000477182 MCL1Q07820 350 aa12.49□□□□□ -0.41
LSM2-212ENST00000477182 ADAM9Q13443 819 aa12.49□□□□□ -0.41
LSM2-212ENST00000477182 NCAPHQ15003 741 aa12.49□□□□□ -0.41
LSM2-212ENST00000477182 NFIL3Q16649 462 aa12.49□□□□□ -0.41
LSM2-212ENST00000477182 SLC27A1Q6PCB7 646 aa12.49□□□□□ -0.41
LSM2-212ENST00000477182 TAS1R1Q7RTX1 841 aa12.49□□□□□ -0.41
LSM2-212ENST00000477182 C12orf56Q8IXR9 622 aa12.49□□□□□ -0.41
LSM2-212ENST00000477182 ZC3H3Q8IXZ2 948 aaKnown RBP12.49□□□□□ -0.41
LSM2-212ENST00000477182 DNASE1L2Q92874 299 aa12.49□□□□□ -0.41
LSM2-212ENST00000477182 SAAL1Q96ER3 474 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms