RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 RNF25Q96BH1 459 aaPredicted RBP12.2□□□□□ -0.46
NUP188-205ENST00000477069 WHRNQ9P202 907 aa12.2□□□□□ -0.46
NUP188-205ENST00000477069 PPFIA4O75335 1185 aa12.19□□□□□ -0.46
NUP188-205ENST00000477069 CSDE1O75534 798 aaKnown RBP12.19□□□□□ -0.46
NUP188-205ENST00000477069 TCF4P15884 667 aa12.19□□□□□ -0.46
NUP188-205ENST00000477069 ARF4P18085 180 aaPredicted RBP12.19□□□□□ -0.46
NUP188-205ENST00000477069 RAP1GAPP47736 663 aa12.19□□□□□ -0.46
NUP188-205ENST00000477069 EIF3BP55884 814 aaKnown RBP12.19□□□□□ -0.46
NUP188-205ENST00000477069 GSCP56915 257 aaPredicted RBP12.19□□□□□ -0.46
NUP188-205ENST00000477069 TNFAIP2Q03169 654 aa12.19□□□□□ -0.46
NUP188-205ENST00000477069 UBAP2Q5T6F2 1119 aaKnown RBP12.19□□□□□ -0.46
NUP188-205ENST00000477069 SYDE1Q6ZW31 735 aaPredicted RBP12.19□□□□□ -0.46
NUP188-205ENST00000477069 NIPA2Q8N8Q9 360 aa12.19□□□□□ -0.46
NUP188-205ENST00000477069 LHX5Q9H2C1 402 aa12.19□□□□□ -0.46
NUP188-205ENST00000477069 LCMT1Q9UIC8 334 aa12.19□□□□□ -0.46
NUP188-205ENST00000477069 GOLGA6L10A6NI86 522 aa12.19□□□□□ -0.46
NUP188-205ENST00000477069 ERLIN2O94905 339 aa12.19□□□□□ -0.46
NUP188-205ENST00000477069 VTNP04004 478 aa12.19□□□□□ -0.46
NUP188-205ENST00000477069 SHBGP04278 402 aa12.19□□□□□ -0.46
NUP188-205ENST00000477069 SMPD1P17405 629 aa12.19□□□□□ -0.46
NUP188-205ENST00000477069 ATP1A2P50993 1020 aa12.19□□□□□ -0.46
NUP188-205ENST00000477069 RAD23BP54727 409 aa12.19□□□□□ -0.46
NUP188-205ENST00000477069 YWHAEP62258 255 aaKnown RBP12.19□□□□□ -0.46
NUP188-205ENST00000477069 SLC10A6Q3KNW5 377 aa12.19□□□□□ -0.46
NUP188-205ENST00000477069 DENND1BQ6P3S1 775 aa12.19□□□□□ -0.46
NUP188-205ENST00000477069 GPR142Q7Z601 462 aa12.19□□□□□ -0.46
NUP188-205ENST00000477069 CPB2Q96IY4 423 aa12.19□□□□□ -0.46
NUP188-205ENST00000477069 MAML3Q96JK9 1138 aa12.19□□□□□ -0.46
NUP188-205ENST00000477069 ASB7Q9H672 318 aa12.19□□□□□ -0.46
NUP188-205ENST00000477069 CYTH4Q9UIA0 394 aa12.19□□□□□ -0.46
NUP188-205ENST00000477069 ADCY6O43306 1168 aa12.18□□□□□ -0.46
NUP188-205ENST00000477069 TSPAN1O60635 241 aa12.18□□□□□ -0.46
NUP188-205ENST00000477069 PAEPP09466 180 aa12.18□□□□□ -0.46
NUP188-205ENST00000477069 PDCLQ13371 301 aa12.18□□□□□ -0.46
NUP188-205ENST00000477069 DUSP28Q4G0W2 176 aa12.18□□□□□ -0.46
NUP188-205ENST00000477069 LRRC38Q5VT99 294 aa12.18□□□□□ -0.46
NUP188-205ENST00000477069 C3orf20Q8ND61 904 aa12.18□□□□□ -0.46
NUP188-205ENST00000477069 TLCD1Q96CP7 247 aa12.18□□□□□ -0.46
NUP188-205ENST00000477069 MCEEQ96PE7 176 aa12.18□□□□□ -0.46
NUP188-205ENST00000477069 OSBPL8Q9BZF1 889 aa12.18□□□□□ -0.46
NUP188-205ENST00000477069 AAASQ9NRG9 546 aa12.18□□□□□ -0.46
NUP188-205ENST00000477069 SLC12A6Q9UHW9 1150 aa12.18□□□□□ -0.46
NUP188-205ENST00000477069 H3BRB1 525 aa12.18□□□□□ -0.46
NUP188-205ENST00000477069 ZEB2O60315 1214 aa12.18□□□□□ -0.46
NUP188-205ENST00000477069 ITGB3P05106 788 aa12.18□□□□□ -0.46
NUP188-205ENST00000477069 MMP3P08254 477 aa12.18□□□□□ -0.46
NUP188-205ENST00000477069 TAP1Q03518 808 aa12.18□□□□□ -0.46
NUP188-205ENST00000477069 SNX1Q13596 522 aa12.18□□□□□ -0.46
NUP188-205ENST00000477069 CCNG2Q16589 344 aa12.18□□□□□ -0.46
NUP188-205ENST00000477069 TMEM132AQ24JP5 1023 aa12.18□□□□□ -0.46
NUP188-205ENST00000477069 PTPN20Q4JDL3 420 aa12.18□□□□□ -0.46
NUP188-205ENST00000477069 MAP1SQ66K74 1059 aaPredicted RBP12.18□□□□□ -0.46
NUP188-205ENST00000477069 TTC19Q6DKK2 380 aaPredicted RBP12.18□□□□□ -0.46
NUP188-205ENST00000477069 DNAJC24Q6P3W2 148 aa12.18□□□□□ -0.46
NUP188-205ENST00000477069 SLC4A11Q8NBS3 891 aa12.18□□□□□ -0.46
NUP188-205ENST00000477069 TWNKQ96RR1 684 aa12.18□□□□□ -0.46
NUP188-205ENST00000477069 PPP1R16BQ96T49 567 aa12.18□□□□□ -0.46
NUP188-205ENST00000477069 TUT1Q9H6E5 874 aaKnown RBP12.18□□□□□ -0.46
NUP188-205ENST00000477069 MTRF1LQ9UGC7 380 aaKnown RBP12.18□□□□□ -0.46
NUP188-205ENST00000477069 AKT3Q9Y243 479 aa12.18□□□□□ -0.46
NUP188-205ENST00000477069 RARGP13631 454 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 ATICP31939 592 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 PTPN7P35236 360 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 PPP1R7Q15435 360 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 ZNF667Q5HYK9 610 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 SLITRK1Q96PX8 696 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 SEMA4AQ9H3S1 761 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 SMYD3Q9H7B4 428 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 HOMER3Q9NSC5 361 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 NXF1Q9UBU9 619 aaKnown RBP12.17□□□□□ -0.46
NUP188-205ENST00000477069 HMGXB4Q9UGU5 601 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 USTQ9Y2C2 406 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 TRIP11Q15643 1979 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 DCDC2CA8MYV0 355 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 CILPO75339 1184 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 MDH1P40925 334 aaKnown RBP12.17□□□□□ -0.46
NUP188-205ENST00000477069 CDH8P55286 799 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 GUCY1A3Q02108 690 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 ADCY2Q08462 1091 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 MKRN3Q13064 507 aaKnown RBP12.17□□□□□ -0.46
NUP188-205ENST00000477069 GRIK4Q16099 956 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 KYAT1Q16773 422 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 ERICH1Q86X53 443 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 KIAA0319LQ8IZA0 1049 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 GRK7Q8WTQ7 553 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 PTPN18Q99952 460 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 TMEM109Q9BVC6 243 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 HEMGNQ9BXL5 484 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 ELOVL4Q9GZR5 314 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 ZNF408Q9H9D4 720 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 CWC15Q9P013 229 aaKnown RBP12.17□□□□□ -0.46
NUP188-205ENST00000477069 KAT6AQ92794 2004 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 A0A1B0GUA9 196 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 F8VP50 259 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 RIPK2O43353 540 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 STAU1O95793 577 aaKnown RBP12.17□□□□□ -0.46
NUP188-205ENST00000477069 KRT19P08727 400 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 ITIH2P19823 946 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 TMOD1P28289 359 aa12.17□□□□□ -0.46
NUP188-205ENST00000477069 FKBP1BP68106 108 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms