RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 UROC1Q96N76 676 aa18.95■□□□□ 0.62
SREBF1-211ENST00000476994 PI4K2AQ9BTU6 479 aa18.95■□□□□ 0.62
SREBF1-211ENST00000476994 TRIM5Q9C035 493 aa18.95■□□□□ 0.62
SREBF1-211ENST00000476994 APOBEC3GQ9HC16 384 aaKnown RBP18.95■□□□□ 0.62
SREBF1-211ENST00000476994 AGAP1Q9UPQ3 857 aa18.95■□□□□ 0.62
SREBF1-211ENST00000476994 TMEM189-UBE2V1I3L0A0 370 aa18.94■□□□□ 0.62
SREBF1-211ENST00000476994 TULP1O00294 542 aaPredicted RBP18.94■□□□□ 0.62
SREBF1-211ENST00000476994 PODXLO00592 558 aa18.94■□□□□ 0.62
SREBF1-211ENST00000476994 EPHB6O15197 1021 aa18.94■□□□□ 0.62
SREBF1-211ENST00000476994 SPTLC1O15269 473 aa18.94■□□□□ 0.62
SREBF1-211ENST00000476994 NOL4O94818 638 aa18.94■□□□□ 0.62
SREBF1-211ENST00000476994 PBX3P40426 434 aa18.94■□□□□ 0.62
SREBF1-211ENST00000476994 AARSP49588 968 aaKnown RBP eCLIP18.94■□□□□ 0.62
SREBF1-211ENST00000476994 RBP5P82980 135 aa18.94■□□□□ 0.62
SREBF1-211ENST00000476994 PLCB2Q00722 1185 aa18.94■□□□□ 0.62
SREBF1-211ENST00000476994 CBX2Q14781 532 aaPredicted RBP18.94■□□□□ 0.62
SREBF1-211ENST00000476994 CES5AQ6NT32 575 aa18.94■□□□□ 0.62
SREBF1-211ENST00000476994 TMEM175Q9BSA9 504 aa18.94■□□□□ 0.62
SREBF1-211ENST00000476994 GANQ9H2C0 597 aa18.94■□□□□ 0.62
SREBF1-211ENST00000476994 PLCB1Q9NQ66 1216 aa18.94■□□□□ 0.62
SREBF1-211ENST00000476994 ZNF318Q5VUA4 2279 aa18.94■□□□□ 0.62
SREBF1-211ENST00000476994 TECTAO75443 2155 aa18.93■□□□□ 0.62
SREBF1-211ENST00000476994 F8W810 466 aa18.93■□□□□ 0.62
SREBF1-211ENST00000476994 ZC3H11AO75152 810 aaKnown RBP eCLIP18.93■□□□□ 0.62
SREBF1-211ENST00000476994 PHACTR2O75167 634 aa18.93■□□□□ 0.62
SREBF1-211ENST00000476994 GALTP07902 379 aa18.93■□□□□ 0.62
SREBF1-211ENST00000476994 ATICP31939 592 aa18.93■□□□□ 0.62
SREBF1-211ENST00000476994 SLC11A1P49279 550 aa18.93■□□□□ 0.62
SREBF1-211ENST00000476994 BCAR1P56945 870 aa18.93■□□□□ 0.62
SREBF1-211ENST00000476994 NOP14P78316 857 aaKnown RBP18.93■□□□□ 0.62
SREBF1-211ENST00000476994 RNASELQ05823 741 aaKnown RBP18.93■□□□□ 0.62
SREBF1-211ENST00000476994 SPOPLQ6IQ16 392 aa18.93■□□□□ 0.62
SREBF1-211ENST00000476994 TRIM67Q6ZTA4 783 aa18.93■□□□□ 0.62
SREBF1-211ENST00000476994 VSTM4Q8IW00 320 aa18.93■□□□□ 0.62
SREBF1-211ENST00000476994 SUGP1Q8IWZ8 645 aaKnown RBP18.93■□□□□ 0.62
SREBF1-211ENST00000476994 SLC39A11Q8N1S5 342 aa18.93■□□□□ 0.62
SREBF1-211ENST00000476994 SUSD6Q92537 303 aa18.93■□□□□ 0.62
SREBF1-211ENST00000476994 RABGGTAQ92696 567 aa18.93■□□□□ 0.62
SREBF1-211ENST00000476994 DDX27Q96GQ7 796 aaKnown RBP18.93■□□□□ 0.62
SREBF1-211ENST00000476994 TTYH3Q9C0H2 523 aa18.93■□□□□ 0.62
SREBF1-211ENST00000476994 MARCH5Q9NX47 278 aa18.93■□□□□ 0.62
SREBF1-211ENST00000476994 AJAP1Q9UKB5 411 aaPredicted RBP18.93■□□□□ 0.62
SREBF1-211ENST00000476994 NR2E1Q9Y466 385 aa18.93■□□□□ 0.62
SREBF1-211ENST00000476994 NUB1Q9Y5A7 615 aa18.93■□□□□ 0.62
SREBF1-211ENST00000476994 ITIH6Q6UXX5 1313 aa18.93■□□□□ 0.62
SREBF1-211ENST00000476994 PIEZO1Q92508 2521 aa18.92■□□□□ 0.62
SREBF1-211ENST00000476994 HIDE1A8MVS5 230 aa18.92■□□□□ 0.62
SREBF1-211ENST00000476994 KIF4AO95239 1232 aa18.92■□□□□ 0.62
SREBF1-211ENST00000476994 ADCY5O95622 1261 aa18.92■□□□□ 0.62
SREBF1-211ENST00000476994 EFEMP2O95967 443 aa18.92■□□□□ 0.62
SREBF1-211ENST00000476994 KRT19P08727 400 aa18.92■□□□□ 0.62
SREBF1-211ENST00000476994 RBM10P98175 930 aaKnown RBP18.92■□□□□ 0.62
SREBF1-211ENST00000476994 TRPC3Q13507 836 aa18.92■□□□□ 0.62
SREBF1-211ENST00000476994 SGSM1Q2NKQ1 1148 aa18.92■□□□□ 0.62
SREBF1-211ENST00000476994 PHLDB3Q6NSJ2 640 aa18.92■□□□□ 0.62
SREBF1-211ENST00000476994 LIMS2Q7Z4I7 341 aa18.92■□□□□ 0.62
SREBF1-211ENST00000476994 ARHGEF19Q8IW93 802 aa18.92■□□□□ 0.62
SREBF1-211ENST00000476994 MRPL43Q8N983 215 aaKnown RBP18.92■□□□□ 0.62
SREBF1-211ENST00000476994 VN1R2Q8NFZ6 395 aa18.92■□□□□ 0.62
SREBF1-211ENST00000476994 BCL7CQ8WUZ0 217 aaPredicted RBP18.92■□□□□ 0.62
SREBF1-211ENST00000476994 TAF4BQ92750 862 aa18.92■□□□□ 0.62
SREBF1-211ENST00000476994 TATDN2Q93075 761 aa18.92■□□□□ 0.62
SREBF1-211ENST00000476994 PBXIP1Q96AQ6 731 aa18.92■□□□□ 0.62
SREBF1-211ENST00000476994 HPDLQ96IR7 371 aa18.92■□□□□ 0.62
SREBF1-211ENST00000476994 NECTIN4Q96NY8 510 aa18.92■□□□□ 0.62
SREBF1-211ENST00000476994 LSM14BQ9BX40 385 aaKnown RBP18.92■□□□□ 0.62
SREBF1-211ENST00000476994 TMEM221A6NGB7 291 aa18.91■□□□□ 0.62
SREBF1-211ENST00000476994 M0R296 226 aa18.91■□□□□ 0.62
SREBF1-211ENST00000476994 NRP1O14786 923 aa18.91■□□□□ 0.62
SREBF1-211ENST00000476994 CXCL14O95715 111 aa18.91■□□□□ 0.62
SREBF1-211ENST00000476994 LILRA4P59901 499 aa18.91■□□□□ 0.62
SREBF1-211ENST00000476994 ZXDAP98168 799 aa18.91■□□□□ 0.62
SREBF1-211ENST00000476994 ITIH3Q06033 890 aa18.91■□□□□ 0.62
SREBF1-211ENST00000476994 CETN1Q12798 172 aa18.91■□□□□ 0.62
SREBF1-211ENST00000476994 ZNF699Q32M78 642 aa18.91■□□□□ 0.62
SREBF1-211ENST00000476994 KLHDC7AQ5VTJ3 777 aa18.91■□□□□ 0.62
SREBF1-211ENST00000476994 GJB7Q6PEY0 223 aa18.91■□□□□ 0.62
SREBF1-211ENST00000476994 DCLRE1AQ6PJP8 1040 aa18.91■□□□□ 0.62
SREBF1-211ENST00000476994 BMP8AQ7Z5Y6 402 aa18.91■□□□□ 0.62
SREBF1-211ENST00000476994 TMEM173Q86WV6 379 aaPredicted RBP18.91■□□□□ 0.62
SREBF1-211ENST00000476994 ZNF560Q96MR9 790 aa18.91■□□□□ 0.62
SREBF1-211ENST00000476994 FAM193BQ96PV7 902 aaPredicted RBP18.91■□□□□ 0.62
SREBF1-211ENST00000476994 PRRX2Q99811 253 aa18.91■□□□□ 0.62
SREBF1-211ENST00000476994 APOL5Q9BWW9 433 aa18.91■□□□□ 0.62
SREBF1-211ENST00000476994 NAA15Q9BXJ9 866 aaKnown RBP18.91■□□□□ 0.62
SREBF1-211ENST00000476994 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.91■□□□□ 0.629e-10■■■■■ 84.9
SREBF1-211ENST00000476994 GDAP2Q9NXN4 497 aa18.91■□□□□ 0.62
SREBF1-211ENST00000476994 STK39Q9UEW8 545 aa18.91■□□□□ 0.62
SREBF1-211ENST00000476994 PTPRDP23468 1912 aa18.9■□□□□ 0.62
SREBF1-211ENST00000476994 C2orf71A6NGG8 1288 aa18.9■□□□□ 0.62
SREBF1-211ENST00000476994 NT5C1B-RDH14C9J2C7 533 aa18.9■□□□□ 0.62
SREBF1-211ENST00000476994 TPM3P06753 285 aa18.9■□□□□ 0.62
SREBF1-211ENST00000476994 CDC25BP30305 580 aa18.9■□□□□ 0.62
SREBF1-211ENST00000476994 PNPLA4P41247 253 aa18.9■□□□□ 0.62
SREBF1-211ENST00000476994 ASPAP45381 313 aa18.9■□□□□ 0.62
SREBF1-211ENST00000476994 TAF6P49848 677 aa18.9■□□□□ 0.62
SREBF1-211ENST00000476994 KCNC3Q14003 757 aa18.9■□□□□ 0.62
SREBF1-211ENST00000476994 VPS52Q8N1B4 723 aa18.9■□□□□ 0.62
SREBF1-211ENST00000476994 UBR7Q8N806 425 aa18.9■□□□□ 0.62
SREBF1-211ENST00000476994 KAT5Q92993 513 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms