RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 EDN1P05305 212 aa17.44■□□□□ 0.38
TMEM53-208ENST00000476724 CALB1P05937 261 aa17.44■□□□□ 0.38
TMEM53-208ENST00000476724 MMP8P22894 467 aa17.44■□□□□ 0.38
TMEM53-208ENST00000476724 TTC31Q49AM3 519 aaPredicted RBP17.44■□□□□ 0.38
TMEM53-208ENST00000476724 CDCA2Q69YH5 1023 aaPredicted RBP17.44■□□□□ 0.38
TMEM53-208ENST00000476724 C6orf89Q6UWU4 347 aa17.44■□□□□ 0.38
TMEM53-208ENST00000476724 MMS22LQ6ZRQ5 1243 aa17.44■□□□□ 0.38
TMEM53-208ENST00000476724 PLPPR4Q7Z2D5 763 aa17.44■□□□□ 0.38
TMEM53-208ENST00000476724 ZBTB8OSQ8IWT0 167 aa17.44■□□□□ 0.38
TMEM53-208ENST00000476724 CCDC89Q8N998 374 aa17.44■□□□□ 0.38
TMEM53-208ENST00000476724 JPH2Q9BR39 696 aaPredicted RBP17.44■□□□□ 0.38
TMEM53-208ENST00000476724 TCHPQ9BT92 498 aa17.44■□□□□ 0.38
TMEM53-208ENST00000476724 OSBPL8Q9BZF1 889 aa17.44■□□□□ 0.38
TMEM53-208ENST00000476724 CCDC113Q9H0I3 377 aa17.44■□□□□ 0.38
TMEM53-208ENST00000476724 OGTO15294 1046 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 TP73O15350 636 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 CFHP08603 1231 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 RALAP11233 206 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 ATF2P15336 505 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 ATP5DP30049 168 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 MAPK6Q16659 721 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 DUOXA2Q1HG44 320 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 CEP128Q6ZU80 1094 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 PHLDB2Q86SQ0 1253 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 IFNL1Q8IU54 200 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 PASD1Q8IV76 773 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 RCOR2Q8IZ40 523 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 MICALL1Q8N3F8 863 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 TRAPPC12Q8WVT3 735 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 SERPINB12Q96P63 405 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 ZIC5Q96T25 663 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 ACO2Q99798 780 aaKnown RBP17.43■□□□□ 0.38
TMEM53-208ENST00000476724 TINF2Q9BSI4 451 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 CDC42EP4Q9H3Q1 356 aaKnown RBP17.43■□□□□ 0.38
TMEM53-208ENST00000476724 FAM189A1O60320 539 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 TAP1Q03518 808 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 AUHQ13825 339 aaKnown RBP17.43■□□□□ 0.38
TMEM53-208ENST00000476724 C2CD6Q53TS8 623 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 LRRC38Q5VT99 294 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 CCDC25Q86WR0 208 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 ZBTB10Q96DT7 871 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 CHMP6Q96FZ7 201 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 CCDC114Q96M63 670 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 FOXP3Q9BZS1 431 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 DDX20Q9UHI6 824 aaKnown RBP17.43■□□□□ 0.38
TMEM53-208ENST00000476724 ANAPC5Q9UJX4 755 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 TLL2Q9Y6L7 1015 aa17.43■□□□□ 0.38
TMEM53-208ENST00000476724 SLC15A5A6NIM6 579 aa17.42■□□□□ 0.38
TMEM53-208ENST00000476724 ADCY6O43306 1168 aa17.42■□□□□ 0.38
TMEM53-208ENST00000476724 CST3P01034 146 aaPredicted RBP17.42■□□□□ 0.38
TMEM53-208ENST00000476724 GH1P01241 217 aa17.42■□□□□ 0.38
TMEM53-208ENST00000476724 CHN1P15882 459 aa17.42■□□□□ 0.38
TMEM53-208ENST00000476724 ADCY8P40145 1251 aa17.42■□□□□ 0.38
TMEM53-208ENST00000476724 TAS2R40P59535 323 aa17.42■□□□□ 0.38
TMEM53-208ENST00000476724 MCL1Q07820 350 aa17.42■□□□□ 0.38
TMEM53-208ENST00000476724 MKRN4PQ13434 485 aaPredicted RBP17.42■□□□□ 0.38
TMEM53-208ENST00000476724 LLGL1Q15334 1064 aa17.42■□□□□ 0.38
TMEM53-208ENST00000476724 GKAP1Q5VSY0 366 aaPredicted RBP17.42■□□□□ 0.38
TMEM53-208ENST00000476724 LLGL2Q6P1M3 1020 aa17.42■□□□□ 0.38
TMEM53-208ENST00000476724 ZNF365Q70YC5 407 aa17.42■□□□□ 0.38
TMEM53-208ENST00000476724 CPLX4Q7Z7G2 160 aa17.42■□□□□ 0.38
TMEM53-208ENST00000476724 TMEM35BQ8NCS4 154 aa17.42■□□□□ 0.38
TMEM53-208ENST00000476724 CCHCR1Q8TD31 782 aa17.42■□□□□ 0.38
TMEM53-208ENST00000476724 ATG4AQ8WYN0 398 aa17.42■□□□□ 0.38
TMEM53-208ENST00000476724 RBM41Q96IZ5 413 aaKnown RBP17.42■□□□□ 0.38
TMEM53-208ENST00000476724 AAASQ9NRG9 546 aa17.42■□□□□ 0.38
TMEM53-208ENST00000476724 NEU2Q9Y3R4 380 aa17.42■□□□□ 0.38
TMEM53-208ENST00000476724 EVPLQ92817 2033 aa17.42■□□□□ 0.38
TMEM53-208ENST00000476724 IGKV6-21A0A0C4DH24 114 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 TMEM191CA6NGB0 347 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 FSBPO95073 299 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 TTC4O95801 387 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 TMEM191BP0C7N4 346 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 HARSP12081 509 aaKnown RBP17.41■□□□□ 0.38
TMEM53-208ENST00000476724 SMPD1P17405 629 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 LIG3P49916 1009 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 ITGA8P53708 1063 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 COPS2P61201 443 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 LAMTOR4Q0VGL1 99 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 MORN1Q5T089 497 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 C17orf99Q6UX52 265 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 CACNA2D3Q8IZS8 1091 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 LRRC71Q8N4P6 559 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 EPS8L3Q8TE67 593 aaKnown RBP17.41■□□□□ 0.38
TMEM53-208ENST00000476724 AFG1LQ8WV93 481 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 SELENOSQ9BQE4 189 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 HERPUD2Q9BSE4 406 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 NIF3L1Q9GZT8 377 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 ADAM7Q9H2U9 754 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 RNPEPQ9H4A4 650 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 SMARCAD1Q9H4L7 1026 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 CCDC134Q9H6E4 229 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 FLRT1Q9NZU1 646 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 CPSF3Q9UKF6 684 aaKnown RBP17.41■□□□□ 0.38
TMEM53-208ENST00000476724 PCNTO95613 3336 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 LGALS2P05162 132 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 PRKCBP05771 671 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 EIF4BP23588 611 aaKnown RBP17.41■□□□□ 0.38
TMEM53-208ENST00000476724 TNFSF9P41273 254 aa17.41■□□□□ 0.38
TMEM53-208ENST00000476724 YWHAEP62258 255 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms