RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 DGKEP52429 567 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 CDC42EP1Q00587 391 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 TLE3Q04726 772 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 NR5A1Q13285 461 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 DMC1Q14565 340 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 NBR1Q14596 966 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 SMAD1Q15797 465 aaKnown RBP7.11□□□□□ -1.27
CLDN4-205ENST00000476494 KLHL40Q2TBA0 621 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 FOXD4L6Q3SYB3 417 aaPredicted RBP7.11□□□□□ -1.27
CLDN4-205ENST00000476494 FAM171A1Q5VUB5 890 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 ADALQ6DHV7 355 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 TYW1BQ6NUM6 668 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 FAM173BQ6P4H8 233 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 FOXD4L3Q6VB84 417 aaPredicted RBP7.11□□□□□ -1.27
CLDN4-205ENST00000476494 DBX2Q6ZNG2 339 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 TRMT1LQ7Z2T5 733 aaKnown RBP7.11□□□□□ -1.27
CLDN4-205ENST00000476494 NAXDQ8IW45 347 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 LINC00301Q8NCQ3 95 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 OXER1Q8TDS5 423 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 SYAP1Q96A49 352 aaPredicted RBP7.11□□□□□ -1.27
CLDN4-205ENST00000476494 PSMG3-AS1Q96PY0 264 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 TPSD1Q9BZJ3 242 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 MINDY3Q9H8M7 445 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 UBN1Q9NPG3 1134 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 CEP72Q9P209 647 aa7.11□□□□□ -1.27
CLDN4-205ENST00000476494 MYO18AQ92614 2054 aaKnown RBP7.11□□□□□ -1.27
CLDN4-205ENST00000476494 NBASA2RRP1 2371 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 SF3B1O75533 1304 aaKnown RBP eCLIP7.1□□□□□ -1.27
CLDN4-205ENST00000476494 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 ANTXRLA6NF34 631 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 TADA2AO75478 443 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 STBD1O95210 358 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 SEC24AO95486 1093 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 ATXN1LP0C7T5 689 aaKnown RBP7.1□□□□□ -1.27
CLDN4-205ENST00000476494 GCFC2P16383 781 aaKnown RBP7.1□□□□□ -1.27
CLDN4-205ENST00000476494 CR2P20023 1033 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 FGFR3P22607 806 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 ADSSP30520 456 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 P2RY2P41231 377 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 ME1P48163 572 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 CLK2P49760 499 aaKnown RBP7.1□□□□□ -1.27
CLDN4-205ENST00000476494 TOB1P50616 345 aaPredicted RBP7.1□□□□□ -1.27
CLDN4-205ENST00000476494 USP11P51784 963 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 TEAD2Q15562 447 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 DUOXA1Q1HG43 343 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 ARHGAP29Q52LW3 1261 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 CEP55Q53EZ4 464 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 C4orf17Q53FE4 359 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 TAF1BQ53T94 588 aaPredicted RBP7.1□□□□□ -1.27
CLDN4-205ENST00000476494 SPDYCQ5MJ68 293 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 TTC38Q5R3I4 469 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 ARL6IP4Q66PJ3 421 aaKnown RBP7.1□□□□□ -1.27
CLDN4-205ENST00000476494 NAIF1Q69YI7 327 aaPredicted RBP7.1□□□□□ -1.27
CLDN4-205ENST00000476494 MIS18BP1Q6P0N0 1132 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 CD300LGQ6UXG3 332 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 PIK3AP1Q6ZUJ8 805 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 CATSPER4Q7RTX7 472 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 NEK8Q86SG6 692 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 ZNF410Q86VK4 478 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 GPIHBP1Q8IV16 184 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 KSR1Q8IVT5 923 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 ZNF579Q8NAF0 562 aaKnown RBP7.1□□□□□ -1.27
CLDN4-205ENST00000476494 MDGA1Q8NFP4 955 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 SNIP1Q8TAD8 396 aaKnown RBP7.1□□□□□ -1.27
CLDN4-205ENST00000476494 ZNF461Q8TAF7 563 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 SHKBP1Q8TBC3 707 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 MED8Q96G25 268 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 CNOT6LQ96LI5 555 aaKnown RBP7.1□□□□□ -1.27
CLDN4-205ENST00000476494 FAM83CQ9BQN1 747 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 GTPBP2Q9BX10 602 aaKnown RBP7.1□□□□□ -1.27
CLDN4-205ENST00000476494 TRIM4Q9C037 500 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 INO80BQ9C086 356 aaPredicted RBP7.1□□□□□ -1.27
CLDN4-205ENST00000476494 HPS4Q9NQG7 708 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 HES2Q9Y543 173 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 IPPQ9Y573 584 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 PCDHB9Q9Y5E1 797 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 CLIC4Q9Y696 253 aa7.1□□□□□ -1.27
CLDN4-205ENST00000476494 ATXN2Q99700 1313 aaKnown RBP7.09□□□□□ -1.27
CLDN4-205ENST00000476494 SPDYE3A6NKU9 549 aa7.09□□□□□ -1.27
CLDN4-205ENST00000476494 DDX39AO00148 427 aaKnown RBP7.09□□□□□ -1.27
CLDN4-205ENST00000476494 CUTAO60888 179 aa7.09□□□□□ -1.27
CLDN4-205ENST00000476494 LETM1O95202 739 aaPredicted RBP7.09□□□□□ -1.27
CLDN4-205ENST00000476494 KIF4AO95239 1232 aa7.09□□□□□ -1.27
CLDN4-205ENST00000476494 CHRM1P11229 460 aaPredicted RBP7.09□□□□□ -1.27
CLDN4-205ENST00000476494 ITGA4P13612 1032 aa7.09□□□□□ -1.27
CLDN4-205ENST00000476494 HNRNPLP14866 589 aaKnown RBP eCLIP7.09□□□□□ -1.27
CLDN4-205ENST00000476494 CMA1P23946 247 aa7.09□□□□□ -1.27
CLDN4-205ENST00000476494 PRPHP41219 470 aa7.09□□□□□ -1.27
CLDN4-205ENST00000476494 GALK1P51570 392 aa7.09□□□□□ -1.27
CLDN4-205ENST00000476494 RHDQ02161 417 aa7.09□□□□□ -1.27
CLDN4-205ENST00000476494 CEBPZQ03701 1054 aaKnown RBP7.09□□□□□ -1.27
CLDN4-205ENST00000476494 GFPT1Q06210 699 aaPredicted RBP7.09□□□□□ -1.27
CLDN4-205ENST00000476494 GRSF1Q12849 480 aaKnown RBP eCLIP7.09□□□□□ -1.27
CLDN4-205ENST00000476494 UBAP2LQ14157 1087 aaKnown RBP7.09□□□□□ -1.27
CLDN4-205ENST00000476494 HSP90AA2PQ14568 343 aaPredicted RBP7.09□□□□□ -1.27
CLDN4-205ENST00000476494 PTPAQ15257 358 aa7.09□□□□□ -1.27
CLDN4-205ENST00000476494 NAB2Q15742 525 aa7.09□□□□□ -1.27
CLDN4-205ENST00000476494 UBE2SQ16763 222 aa7.09□□□□□ -1.27
CLDN4-205ENST00000476494 KRTAP21-3Q3LHN1 58 aa7.09□□□□□ -1.27
CLDN4-205ENST00000476494 ITPRIPL2Q3MIP1 535 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms