RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 TTC9BQ8N6N2 239 aa11.74□□□□□ -0.53
CDRT1-205ENST00000475944 RSPRY1Q96DX4 576 aa11.74□□□□□ -0.53
CDRT1-205ENST00000475944 GCNAQ96QF7 691 aa11.74□□□□□ -0.53
CDRT1-205ENST00000475944 MKNK1Q9BUB5 465 aa11.74□□□□□ -0.53
CDRT1-205ENST00000475944 PARD6AQ9NPB6 346 aa11.74□□□□□ -0.53
CDRT1-205ENST00000475944 CPSF3Q9UKF6 684 aaKnown RBP11.74□□□□□ -0.53
CDRT1-205ENST00000475944 DSEQ9UL01 958 aa11.74□□□□□ -0.53
CDRT1-205ENST00000475944 DERAQ9Y315 318 aa11.74□□□□□ -0.53
CDRT1-205ENST00000475944 ANO9A1A5B4 782 aa11.73□□□□□ -0.53
CDRT1-205ENST00000475944 TBCAO75347 108 aaKnown RBP11.73□□□□□ -0.53
CDRT1-205ENST00000475944 SOAT2O75908 522 aa11.73□□□□□ -0.53
CDRT1-205ENST00000475944 BMP15O95972 392 aa11.73□□□□□ -0.53
CDRT1-205ENST00000475944 CYP11A1P05108 521 aa11.73□□□□□ -0.53
CDRT1-205ENST00000475944 NFICP08651 508 aa11.73□□□□□ -0.53
CDRT1-205ENST00000475944 CDC25CP30307 473 aa11.73□□□□□ -0.53
CDRT1-205ENST00000475944 SOX9P48436 509 aa11.73□□□□□ -0.53
CDRT1-205ENST00000475944 PLCB2Q00722 1185 aa11.73□□□□□ -0.53
CDRT1-205ENST00000475944 SPEM2Q0P670 501 aa11.73□□□□□ -0.53
CDRT1-205ENST00000475944 DNAH14Q0VDD8 3507 aa11.73□□□□□ -0.53
CDRT1-205ENST00000475944 SMARCB1Q12824 385 aa11.73□□□□□ -0.53
CDRT1-205ENST00000475944 DHX8Q14562 1220 aaKnown RBP11.73□□□□□ -0.53
CDRT1-205ENST00000475944 TMEM132DQ14C87 1099 aa11.73□□□□□ -0.53
CDRT1-205ENST00000475944 RABEP1Q15276 862 aa11.73□□□□□ -0.53
CDRT1-205ENST00000475944 MGAT5BQ3V5L5 792 aa11.73□□□□□ -0.53
CDRT1-205ENST00000475944 GPR179Q6PRD1 2367 aa11.73□□□□□ -0.53
CDRT1-205ENST00000475944 WDR87Q6ZQQ6 2873 aa11.73□□□□□ -0.53
CDRT1-205ENST00000475944 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.73□□□□□ -0.53
CDRT1-205ENST00000475944 LONP2Q86WA8 852 aa11.73□□□□□ -0.53
CDRT1-205ENST00000475944 METTL23Q86XA0 190 aa11.73□□□□□ -0.53
CDRT1-205ENST00000475944 OR10T2Q8NGX3 314 aa11.73□□□□□ -0.53
CDRT1-205ENST00000475944 RASSF8Q8NHQ8 419 aa11.73□□□□□ -0.53
CDRT1-205ENST00000475944 NETO1Q8TDF5 533 aa11.73□□□□□ -0.53
CDRT1-205ENST00000475944 BPIFB1Q8TDL5 484 aa11.73□□□□□ -0.53
CDRT1-205ENST00000475944 NUP210Q8TEM1 1887 aaPredicted RBP11.73□□□□□ -0.53
CDRT1-205ENST00000475944 TMEM209Q96SK2 561 aa11.73□□□□□ -0.53
CDRT1-205ENST00000475944 SEPT5Q99719 369 aaPredicted RBP11.73□□□□□ -0.53
CDRT1-205ENST00000475944 ZHX3Q9H4I2 956 aa11.73□□□□□ -0.53
CDRT1-205ENST00000475944 ASB7Q9H672 318 aa11.73□□□□□ -0.53
CDRT1-205ENST00000475944 TASP1Q9H6P5 420 aa11.73□□□□□ -0.53
CDRT1-205ENST00000475944 RBM12Q9NTZ6 932 aaKnown RBP11.73□□□□□ -0.53
CDRT1-205ENST00000475944 THG1LQ9NWX6 298 aaKnown RBP11.73□□□□□ -0.53
CDRT1-205ENST00000475944 ZMYM5Q9UJ78 669 aa11.73□□□□□ -0.53
CDRT1-205ENST00000475944 TSC2P49815 1807 aa11.72□□□□□ -0.53
CDRT1-205ENST00000475944 CHURC1-FNTBB4DL54 471 aa11.72□□□□□ -0.53
CDRT1-205ENST00000475944 K7ESF4 209 aa11.72□□□□□ -0.53
CDRT1-205ENST00000475944 PIRO00625 290 aa11.72□□□□□ -0.53
CDRT1-205ENST00000475944 PLCG1P19174 1290 aa11.72□□□□□ -0.53
CDRT1-205ENST00000475944 GJB2P29033 226 aa11.72□□□□□ -0.53
CDRT1-205ENST00000475944 WEE1P30291 646 aa11.72□□□□□ -0.53
CDRT1-205ENST00000475944 FNTBP49356 437 aa11.72□□□□□ -0.53
CDRT1-205ENST00000475944 TAF6P49848 677 aa11.72□□□□□ -0.53
CDRT1-205ENST00000475944 GTF2BQ00403 316 aa11.72□□□□□ -0.53
CDRT1-205ENST00000475944 PTPAQ15257 358 aa11.72□□□□□ -0.53
CDRT1-205ENST00000475944 TAF12Q16514 161 aa11.72□□□□□ -0.53
CDRT1-205ENST00000475944 SLC39A12Q504Y0 691 aa11.72□□□□□ -0.53
CDRT1-205ENST00000475944 SLFN12LQ6IEE8 588 aa11.72□□□□□ -0.53
CDRT1-205ENST00000475944 SLC39A4Q6P5W5 647 aa11.72□□□□□ -0.53
CDRT1-205ENST00000475944 TXNDC11Q6PKC3 985 aa11.72□□□□□ -0.53
CDRT1-205ENST00000475944 Q6ZS52 159 aa11.72□□□□□ -0.53
CDRT1-205ENST00000475944 GPIHBP1Q8IV16 184 aa11.72□□□□□ -0.53
CDRT1-205ENST00000475944 THEM5Q8N1Q8 247 aa11.72□□□□□ -0.53
CDRT1-205ENST00000475944 SYNPOQ8N3V7 929 aa11.72□□□□□ -0.53
CDRT1-205ENST00000475944 SPPL2BQ8TCT7 592 aa11.72□□□□□ -0.53
CDRT1-205ENST00000475944 C2orf15Q8WU43 125 aaKnown RBP11.72□□□□□ -0.53
CDRT1-205ENST00000475944 TMX3Q96JJ7 454 aa11.72□□□□□ -0.53
CDRT1-205ENST00000475944 ZFYVE19Q96K21 471 aa11.72□□□□□ -0.53
CDRT1-205ENST00000475944 LPIN3Q9BQK8 851 aa11.72□□□□□ -0.53
CDRT1-205ENST00000475944 ZCWPW1Q9H0M4 648 aa11.72□□□□□ -0.53
CDRT1-205ENST00000475944 BLOC1S4Q9NUP1 217 aa11.72□□□□□ -0.53
CDRT1-205ENST00000475944 GTSE1Q9NYZ3 720 aa11.72□□□□□ -0.53
CDRT1-205ENST00000475944 C2CD2Q9Y426 696 aa11.72□□□□□ -0.53
CDRT1-205ENST00000475944 CEP250Q9BV73 2442 aa11.71□□□□□ -0.53
CDRT1-205ENST00000475944 F5P12259 2224 aa11.71□□□□□ -0.53
CDRT1-205ENST00000475944 DCDC2BA2VCK2 349 aa11.71□□□□□ -0.53
CDRT1-205ENST00000475944 CYB561D2O14569 222 aa11.71□□□□□ -0.53
CDRT1-205ENST00000475944 HRO43593 1189 aa11.71□□□□□ -0.53
CDRT1-205ENST00000475944 FOXD2O60548 495 aaPredicted RBP11.71□□□□□ -0.53
CDRT1-205ENST00000475944 PRAMEF12O95522 483 aa11.71□□□□□ -0.53
CDRT1-205ENST00000475944 ATF6P18850 670 aa11.71□□□□□ -0.53
CDRT1-205ENST00000475944 HOXA6P31267 233 aa11.71□□□□□ -0.53
CDRT1-205ENST00000475944 LONP1P36776 959 aaKnown RBP11.71□□□□□ -0.53
CDRT1-205ENST00000475944 MCM2P49736 904 aa11.71□□□□□ -0.53
CDRT1-205ENST00000475944 ACOT2P49753 483 aa11.71□□□□□ -0.53
CDRT1-205ENST00000475944 CYP4F8P98187 520 aa11.71□□□□□ -0.53
CDRT1-205ENST00000475944 POU5F1Q01860 360 aaKnown RBP11.71□□□□□ -0.53
CDRT1-205ENST00000475944 CCINQ13939 588 aa11.71□□□□□ -0.53
CDRT1-205ENST00000475944 MCM6Q14566 821 aa11.71□□□□□ -0.53
CDRT1-205ENST00000475944 PON2Q15165 354 aa11.71□□□□□ -0.53
CDRT1-205ENST00000475944 HEATR6Q6AI08 1181 aaKnown RBP11.71□□□□□ -0.53
CDRT1-205ENST00000475944 ADALQ6DHV7 355 aa11.71□□□□□ -0.53
CDRT1-205ENST00000475944 CEP68Q76N32 757 aa11.71□□□□□ -0.53
CDRT1-205ENST00000475944 TTC8Q8TAM2 541 aa11.71□□□□□ -0.53
CDRT1-205ENST00000475944 LRRC15Q8TF66 581 aa11.71□□□□□ -0.53
CDRT1-205ENST00000475944 LARP4BQ92615 738 aaKnown RBP11.71□□□□□ -0.53
CDRT1-205ENST00000475944 RAD54LQ92698 747 aa11.71□□□□□ -0.53
CDRT1-205ENST00000475944 LRRC3BQ96PB8 259 aa11.71□□□□□ -0.53
CDRT1-205ENST00000475944 PYM1Q9BRP8 204 aaKnown RBP11.71□□□□□ -0.53
CDRT1-205ENST00000475944 CCSER1Q9C0I3 900 aa11.71□□□□□ -0.53
CDRT1-205ENST00000475944 SEMA4GQ9NTN9 838 aa11.71□□□□□ -0.53
CDRT1-205ENST00000475944 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms