RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912		Q6YL49	198 aa		6.22	□□□□□ -1.41
PRKD3-208	ENST00000475912	MAPKAPK5	Q8IW41	473 aa		6.22	□□□□□ -1.41
PRKD3-208	ENST00000475912	GPR150	Q8NGU9	434 aa		6.22	□□□□□ -1.41
PRKD3-208	ENST00000475912	REXO4	Q9GZR2	422 aa	Known RBP	6.22	□□□□□ -1.41
PRKD3-208	ENST00000475912	CYP4F11	Q9HBI6	524 aa		6.22	□□□□□ -1.41
PRKD3-208	ENST00000475912	PCDHGA9	Q9Y5G4	932 aa	Known RBP	6.22	□□□□□ -1.41
PRKD3-208	ENST00000475912	PCDHGA8	Q9Y5G5	932 aa		6.22	□□□□□ -1.41
PRKD3-208	ENST00000475912	PCDHGA7	Q9Y5G6	932 aa		6.22	□□□□□ -1.41
PRKD3-208	ENST00000475912	PCDHGA6	Q9Y5G7	932 aa		6.22	□□□□□ -1.41
PRKD3-208	ENST00000475912	PCDHGA3	Q9Y5H0	932 aa		6.22	□□□□□ -1.41
PRKD3-208	ENST00000475912	KIF1A	Q12756	1690 aa		6.22	□□□□□ -1.41
PRKD3-208	ENST00000475912	SBNO1	A3KN83	1393 aa		6.21	□□□□□ -1.41
PRKD3-208	ENST00000475912	NUP155	O75694	1391 aa		6.21	□□□□□ -1.41
PRKD3-208	ENST00000475912	AATK	Q6ZMQ8	1374 aa		6.21	□□□□□ -1.41
PRKD3-208	ENST00000475912		A0A1B0GTW7	788 aa		6.21	□□□□□ -1.42
PRKD3-208	ENST00000475912	TCRBV7S2A1N4T	A0A589	114 aa		6.21	□□□□□ -1.42
PRKD3-208	ENST00000475912	CCDC78	A2IDD5	438 aa		6.21	□□□□□ -1.42
PRKD3-208	ENST00000475912	FZD9	O00144	591 aa		6.21	□□□□□ -1.42
PRKD3-208	ENST00000475912	GCSH	P23434	173 aa		6.21	□□□□□ -1.42
PRKD3-208	ENST00000475912	OCA2	Q04671	838 aa		6.21	□□□□□ -1.42
PRKD3-208	ENST00000475912	CMTR2	Q8IYT2	770 aa	Known RBP	6.21	□□□□□ -1.42
PRKD3-208	ENST00000475912	LCORL	Q8N3X6	602 aa		6.21	□□□□□ -1.42
PRKD3-208	ENST00000475912	ASB10	Q8WXI3	467 aa		6.21	□□□□□ -1.42
PRKD3-208	ENST00000475912	FAM30A	Q9NZY2	134 aa		6.21	□□□□□ -1.42
PRKD3-208	ENST00000475912	SAP30BP	Q9UHR5	308 aa	Known RBP	6.21	□□□□□ -1.42
PRKD3-208	ENST00000475912	PACSIN3	Q9UKS6	424 aa		6.21	□□□□□ -1.42
PRKD3-208	ENST00000475912	ARHGEF10	O15013	1369 aa		6.2	□□□□□ -1.42
PRKD3-208	ENST00000475912	FMN2	Q9NZ56	1722 aa		6.2	□□□□□ -1.42
PRKD3-208	ENST00000475912	TECPR2	O15040	1411 aa		6.2	□□□□□ -1.42
PRKD3-208	ENST00000475912	KLHL33	A6NCF5	533 aa		6.2	□□□□□ -1.42
PRKD3-208	ENST00000475912	GABRD	O14764	452 aa		6.2	□□□□□ -1.42
PRKD3-208	ENST00000475912	KIAA0391	O15091	583 aa	Known RBP	6.2	□□□□□ -1.42
PRKD3-208	ENST00000475912	CDKL5	O76039	1030 aa		6.2	□□□□□ -1.42
PRKD3-208	ENST00000475912	FGFR4	P22455	802 aa		6.2	□□□□□ -1.42
PRKD3-208	ENST00000475912	WAS	P42768	502 aa		6.2	□□□□□ -1.42
PRKD3-208	ENST00000475912	MXRA7	P84157	204 aa		6.2	□□□□□ -1.42
PRKD3-208	ENST00000475912	TARDBP	Q13148	414 aa	Known RBP eCLIP	6.2	□□□□□ -1.42
PRKD3-208	ENST00000475912	PCBP2	Q15366	365 aa	Known RBP eCLIP	6.2	□□□□□ -1.42
PRKD3-208	ENST00000475912	B3GNTL1	Q67FW5	361 aa	Predicted RBP	6.2	□□□□□ -1.42
PRKD3-208	ENST00000475912	MIGA2	Q7L4E1	593 aa		6.2	□□□□□ -1.42
PRKD3-208	ENST00000475912	TMEM132C	Q8N3T6	1108 aa		6.2	□□□□□ -1.42
PRKD3-208	ENST00000475912	SYT17	Q9BSW7	474 aa		6.2	□□□□□ -1.42
PRKD3-208	ENST00000475912	RNPEP	Q9H4A4	650 aa		6.2	□□□□□ -1.42
PRKD3-208	ENST00000475912	USP25	Q9UHP3	1055 aa		6.2	□□□□□ -1.42
PRKD3-208	ENST00000475912	PCDHA13	Q9Y5I0	950 aa		6.2	□□□□□ -1.42
PRKD3-208	ENST00000475912	COL14A1	Q05707	1796 aa	Known RBP	6.2	□□□□□ -1.42
PRKD3-208	ENST00000475912	NRXN1	Q9ULB1	1477 aa		6.2	□□□□□ -1.42
PRKD3-208	ENST00000475912	SPATA31A1	Q5TZJ5	1347 aa		6.2	□□□□□ -1.42
PRKD3-208	ENST00000475912	RRBP1	Q9P2E9	1410 aa	Known RBP	6.19	□□□□□ -1.42
PRKD3-208	ENST00000475912	SHTN1	A0MZ66	631 aa		6.19	□□□□□ -1.42
PRKD3-208	ENST00000475912	PIPSL	A2A3N6	862 aa		6.19	□□□□□ -1.42
PRKD3-208	ENST00000475912	RHOBTB3	O94955	611 aa		6.19	□□□□□ -1.42
PRKD3-208	ENST00000475912	ALAS1	P13196	640 aa		6.19	□□□□□ -1.42
PRKD3-208	ENST00000475912	SLC16A1	P53985	500 aa		6.19	□□□□□ -1.42
PRKD3-208	ENST00000475912	USP14	P54578	494 aa		6.19	□□□□□ -1.42
PRKD3-208	ENST00000475912	HSD11B2	P80365	405 aa		6.19	□□□□□ -1.42
PRKD3-208	ENST00000475912	DCBLD1	Q8N8Z6	715 aa		6.19	□□□□□ -1.42
PRKD3-208	ENST00000475912	SUPT20H	Q8NEM7	779 aa		6.19	□□□□□ -1.42
PRKD3-208	ENST00000475912	ZG16B	Q96DA0	208 aa		6.19	□□□□□ -1.42
PRKD3-208	ENST00000475912	RNF31	Q96EP0	1072 aa		6.19	□□□□□ -1.42
PRKD3-208	ENST00000475912	TMX3	Q96JJ7	454 aa		6.19	□□□□□ -1.42
PRKD3-208	ENST00000475912	TEKT5	Q96M29	485 aa		6.19	□□□□□ -1.42
PRKD3-208	ENST00000475912	ALOXE3	Q9BYJ1	711 aa		6.19	□□□□□ -1.42
PRKD3-208	ENST00000475912	C11orf54	Q9H0W9	315 aa	Predicted RBP	6.19	□□□□□ -1.42
PRKD3-208	ENST00000475912	GSTO2	Q9H4Y5	243 aa		6.19	□□□□□ -1.42
PRKD3-208	ENST00000475912	TDP1	Q9NUW8	608 aa		6.19	□□□□□ -1.42
PRKD3-208	ENST00000475912	SYBU	Q9NX95	663 aa		6.19	□□□□□ -1.42
PRKD3-208	ENST00000475912	RNF181	Q9P0P0	153 aa		6.19	□□□□□ -1.42
PRKD3-208	ENST00000475912	NOX1	Q9Y5S8	564 aa		6.19	□□□□□ -1.42
PRKD3-208	ENST00000475912	CDHR4	A6H8M9	788 aa		6.18	□□□□□ -1.42
PRKD3-208	ENST00000475912	HTRA2	O43464	458 aa	Predicted RBP	6.18	□□□□□ -1.42
PRKD3-208	ENST00000475912	FOS	P01100	380 aa	Predicted RBP	6.18	□□□□□ -1.42
PRKD3-208	ENST00000475912	ITGAM	P11215	1152 aa		6.18	□□□□□ -1.42
PRKD3-208	ENST00000475912	CKB	P12277	381 aa		6.18	□□□□□ -1.42
PRKD3-208	ENST00000475912	CTXN1	P60606	82 aa		6.18	□□□□□ -1.42
PRKD3-208	ENST00000475912	KIF23	Q02241	960 aa	Predicted RBP	6.18	□□□□□ -1.42
PRKD3-208	ENST00000475912	CREM	Q03060	361 aa		6.18	□□□□□ -1.42
PRKD3-208	ENST00000475912	TAP1	Q03518	808 aa		6.18	□□□□□ -1.42
PRKD3-208	ENST00000475912	IL10RA	Q13651	578 aa		6.18	□□□□□ -1.42
PRKD3-208	ENST00000475912	C3orf36	Q3SXR2	165 aa		6.18	□□□□□ -1.42
PRKD3-208	ENST00000475912	SPDYE7P	Q495Y7	208 aa		6.18	□□□□□ -1.42
PRKD3-208	ENST00000475912	RSPH3	Q86UC2	560 aa		6.18	□□□□□ -1.42
PRKD3-208	ENST00000475912	FITM2	Q8N6M3	262 aa		6.18	□□□□□ -1.42
PRKD3-208	ENST00000475912	HDAC10	Q969S8	669 aa		6.18	□□□□□ -1.42
PRKD3-208	ENST00000475912	TOR3A	Q9H497	397 aa		6.18	□□□□□ -1.42
PRKD3-208	ENST00000475912	LIMCH1	Q9UPQ0	1083 aa		6.18	□□□□□ -1.42
PRKD3-208	ENST00000475912	IPP	Q9Y573	584 aa		6.18	□□□□□ -1.42
PRKD3-208	ENST00000475912	MRFAP1	Q9Y605	127 aa		6.18	□□□□□ -1.42
PRKD3-208	ENST00000475912	SHANK3	Q9BYB0	1731 aa		6.18	□□□□□ -1.42
PRKD3-208	ENST00000475912	ALG1L2	C9J202	215 aa		6.17	□□□□□ -1.42
PRKD3-208	ENST00000475912	GPANK1	O95872	356 aa		6.17	□□□□□ -1.42
PRKD3-208	ENST00000475912	BMP5	P22003	454 aa		6.17	□□□□□ -1.42
PRKD3-208	ENST00000475912	NANOS3	P60323	173 aa	Known RBP	6.17	□□□□□ -1.42
PRKD3-208	ENST00000475912	NOMO3	P69849	1222 aa		6.17	□□□□□ -1.42
PRKD3-208	ENST00000475912	CXADR	P78310	365 aa		6.17	□□□□□ -1.42
PRKD3-208	ENST00000475912	CDC42EP1	Q00587	391 aa		6.17	□□□□□ -1.42
PRKD3-208	ENST00000475912	SCAP	Q12770	1279 aa		6.17	□□□□□ -1.42
PRKD3-208	ENST00000475912	NOMO2	Q5JPE7	1267 aa		6.17	□□□□□ -1.42
PRKD3-208	ENST00000475912	ABHD17B	Q5VST6	288 aa		6.17	□□□□□ -1.42
PRKD3-208	ENST00000475912	ARMC6	Q6NXE6	501 aa		6.17	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms