RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 HAPLN2Q9GZV7 340 aa11.41□□□□□ -0.58
CALD1-217ENST00000475772 EPC1Q9H2F5 836 aa11.41□□□□□ -0.58
CALD1-217ENST00000475772 CYP4F11Q9HBI6 524 aa11.41□□□□□ -0.58
CALD1-217ENST00000475772 ZNF334Q9HCZ1 680 aaPredicted RBP11.41□□□□□ -0.58
CALD1-217ENST00000475772 PCDHB6Q9Y5E3 794 aa11.41□□□□□ -0.58
CALD1-217ENST00000475772 PCDHGA2Q9Y5H1 932 aa11.41□□□□□ -0.58
CALD1-217ENST00000475772 INSL5Q9Y5Q6 135 aa11.41□□□□□ -0.58
CALD1-217ENST00000475772 KIF26AQ9ULI4 1882 aaPredicted RBP11.4□□□□□ -0.58
CALD1-217ENST00000475772 PHLPP2Q6ZVD8 1323 aa11.4□□□□□ -0.58
CALD1-217ENST00000475772 SCN1AP35498 2009 aa11.4□□□□□ -0.58
CALD1-217ENST00000475772 CNOT1A5YKK6 2376 aaKnown RBP11.4□□□□□ -0.58
CALD1-217ENST00000475772 ERVH48-1M5A8F1 160 aa11.4□□□□□ -0.58
CALD1-217ENST00000475772 ARNTLO00327 626 aa11.4□□□□□ -0.58
CALD1-217ENST00000475772 MCF2P10911 925 aa11.4□□□□□ -0.58
CALD1-217ENST00000475772 RPL9P32969 192 aaKnown RBP11.4□□□□□ -0.58
CALD1-217ENST00000475772 VIPR2P41587 438 aa11.4□□□□□ -0.58
CALD1-217ENST00000475772 YARSP54577 528 aaKnown RBP11.4□□□□□ -0.58
CALD1-217ENST00000475772 EPHA5P54756 1037 aa11.4□□□□□ -0.58
CALD1-217ENST00000475772 GAS6Q14393 721 aa11.4□□□□□ -0.58
CALD1-217ENST00000475772 SAFBQ15424 915 aaKnown RBP eCLIP11.4□□□□□ -0.58
CALD1-217ENST00000475772 TPGS2Q68CL5 300 aa11.4□□□□□ -0.58
CALD1-217ENST00000475772 BEST2Q8NFU1 509 aa11.4□□□□□ -0.58
CALD1-217ENST00000475772 SNX29Q8TEQ0 813 aa11.4□□□□□ -0.58
CALD1-217ENST00000475772 ATRIPQ8WXE1 791 aa11.4□□□□□ -0.58
CALD1-217ENST00000475772 DNASE1L2Q92874 299 aa11.4□□□□□ -0.58
CALD1-217ENST00000475772 RSPRY1Q96DX4 576 aa11.4□□□□□ -0.58
CALD1-217ENST00000475772 TBC1D32Q96NH3 1257 aa11.4□□□□□ -0.58
CALD1-217ENST00000475772 LLPHQ9BRT6 129 aaKnown RBP11.4□□□□□ -0.58
CALD1-217ENST00000475772 MRPL4Q9BYD3 311 aaKnown RBP11.4□□□□□ -0.58
CALD1-217ENST00000475772 CRISPLD1Q9H336 500 aa11.4□□□□□ -0.58
CALD1-217ENST00000475772 ZFP14Q9HCL3 533 aa11.4□□□□□ -0.58
CALD1-217ENST00000475772 PARD6AQ9NPB6 346 aa11.4□□□□□ -0.58
CALD1-217ENST00000475772 TOPORSQ9NS56 1045 aaPredicted RBP11.4□□□□□ -0.58
CALD1-217ENST00000475772 SLC38A7Q9NVC3 462 aa11.4□□□□□ -0.58
CALD1-217ENST00000475772 LIMCH1Q9UPQ0 1083 aa11.4□□□□□ -0.58
CALD1-217ENST00000475772 ACACBO00763 2458 aa11.4□□□□□ -0.59
CALD1-217ENST00000475772 PRRG1O14668 218 aa11.39□□□□□ -0.59
CALD1-217ENST00000475772 SLC16A4O15374 487 aa11.39□□□□□ -0.59
CALD1-217ENST00000475772 NCAM2O15394 837 aa11.39□□□□□ -0.59
CALD1-217ENST00000475772 CHRNB1P11230 501 aa11.39□□□□□ -0.59
CALD1-217ENST00000475772 U2AF2P26368 475 aaKnown RBP eCLIP11.39□□□□□ -0.59
CALD1-217ENST00000475772 TRAPPC10P48553 1259 aa11.39□□□□□ -0.59
CALD1-217ENST00000475772 RAB15P59190 212 aa11.39□□□□□ -0.59
CALD1-217ENST00000475772 TWF1Q12792 350 aa11.39□□□□□ -0.59
CALD1-217ENST00000475772 ZBTB6Q15916 424 aa11.39□□□□□ -0.59
CALD1-217ENST00000475772 CTXN3Q4LDR2 81 aa11.39□□□□□ -0.59
CALD1-217ENST00000475772 MPZL3Q6UWV2 235 aa11.39□□□□□ -0.59
CALD1-217ENST00000475772 LRRC3BQ96PB8 259 aa11.39□□□□□ -0.59
CALD1-217ENST00000475772 PNMA5Q96PV4 448 aa11.39□□□□□ -0.59
CALD1-217ENST00000475772 TRMT61BQ9BVS5 477 aaKnown RBP11.39□□□□□ -0.59
CALD1-217ENST00000475772 DNAJC25Q9H1X3 360 aa11.39□□□□□ -0.59
CALD1-217ENST00000475772 CHRDQ9H2X0 955 aa11.39□□□□□ -0.59
CALD1-217ENST00000475772 BRD9Q9H8M2 597 aa11.39□□□□□ -0.59
CALD1-217ENST00000475772 LMAN1LQ9HAT1 526 aa11.39□□□□□ -0.59
CALD1-217ENST00000475772 ATP13A2Q9NQ11 1180 aa11.39□□□□□ -0.59
CALD1-217ENST00000475772 TRPV5Q9NQA5 729 aa11.39□□□□□ -0.59
CALD1-217ENST00000475772 KMT5AQ9NQR1 393 aa11.39□□□□□ -0.59
CALD1-217ENST00000475772 TMPRSS4Q9NRS4 437 aa11.39□□□□□ -0.59
CALD1-217ENST00000475772 AFF4Q9UHB7 1163 aaKnown RBP11.39□□□□□ -0.59
CALD1-217ENST00000475772 NDRG2Q9UN36 371 aaKnown RBP11.39□□□□□ -0.59
CALD1-217ENST00000475772 SMG5Q9UPR3 1016 aaKnown RBP11.39□□□□□ -0.59
CALD1-217ENST00000475772 DNM3Q9UQ16 869 aa11.39□□□□□ -0.59
CALD1-217ENST00000475772 EPG5Q9HCE0 2579 aa11.39□□□□□ -0.59
CALD1-217ENST00000475772 DENND4CQ5VZ89 1909 aa11.39□□□□□ -0.59
CALD1-217ENST00000475772 SPAG17Q6Q759 2223 aa11.38□□□□□ -0.59
CALD1-217ENST00000475772 H7C4K7 107 aa11.38□□□□□ -0.59
CALD1-217ENST00000475772 M0QZQ0 153 aa11.38□□□□□ -0.59
CALD1-217ENST00000475772 MAN2B1O00754 1011 aa11.38□□□□□ -0.59
CALD1-217ENST00000475772 ZNF197O14709 1029 aa11.38□□□□□ -0.59
CALD1-217ENST00000475772 OR4Q2P0C623 313 aa11.38□□□□□ -0.59
CALD1-217ENST00000475772 PSMC3P17980 439 aa11.38□□□□□ -0.59
CALD1-217ENST00000475772 GDI1P31150 447 aa11.38□□□□□ -0.59
CALD1-217ENST00000475772 HOXC13P31276 330 aa11.38□□□□□ -0.59
CALD1-217ENST00000475772 SOX11P35716 441 aa11.38□□□□□ -0.59
CALD1-217ENST00000475772 SPAG1Q07617 926 aa11.38□□□□□ -0.59
CALD1-217ENST00000475772 TEAD2Q15562 447 aa11.38□□□□□ -0.59
CALD1-217ENST00000475772 PDZD4Q76G19 769 aaPredicted RBP11.38□□□□□ -0.59
CALD1-217ENST00000475772 TMC8Q8IU68 726 aa11.38□□□□□ -0.59
CALD1-217ENST00000475772 MFSD6LQ8IWD5 586 aa11.38□□□□□ -0.59
CALD1-217ENST00000475772 TMEM161BQ8NDZ6 487 aa11.38□□□□□ -0.59
CALD1-217ENST00000475772 FAM3CQ92520 227 aa11.38□□□□□ -0.59
CALD1-217ENST00000475772 SMARCD2Q92925 531 aa11.38□□□□□ -0.59
CALD1-217ENST00000475772 IRF7Q92985 503 aa11.38□□□□□ -0.59
CALD1-217ENST00000475772 ZNF512Q96ME7 567 aaPredicted RBP11.38□□□□□ -0.59
CALD1-217ENST00000475772 KIF2CQ99661 725 aa11.38□□□□□ -0.59
CALD1-217ENST00000475772 TCHPQ9BT92 498 aa11.38□□□□□ -0.59
CALD1-217ENST00000475772 MKNK1Q9BUB5 465 aa11.38□□□□□ -0.59
CALD1-217ENST00000475772 TRPV4Q9HBA0 871 aa11.38□□□□□ -0.59
CALD1-217ENST00000475772 PGPEP1Q9NXJ5 209 aa11.38□□□□□ -0.59
CALD1-217ENST00000475772 NCDNQ9UBB6 729 aa11.38□□□□□ -0.59
CALD1-217ENST00000475772 TUBGCP4Q9UGJ1 667 aa11.38□□□□□ -0.59
CALD1-217ENST00000475772 MRPS17Q9Y2R5 130 aaKnown RBP11.38□□□□□ -0.59
CALD1-217ENST00000475772 RBM19Q9Y4C8 960 aaKnown RBP11.38□□□□□ -0.59
CALD1-217ENST00000475772 NUB1Q9Y5A7 615 aa11.38□□□□□ -0.59
CALD1-217ENST00000475772 TIMM13Q9Y5L4 95 aaPredicted RBP11.38□□□□□ -0.59
CALD1-217ENST00000475772 TTC26A0AVF1 554 aa11.37□□□□□ -0.59
CALD1-217ENST00000475772 HEPACAM2A8MVW5 462 aa11.37□□□□□ -0.59
CALD1-217ENST00000475772 TOM1L1O75674 476 aa11.37□□□□□ -0.59
CALD1-217ENST00000475772 OAZ2O95190 189 aa11.37□□□□□ -0.59
CALD1-217ENST00000475772 HARSP12081 509 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms