RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 UBXN7O94888 489 aa8.11□□□□□ -1.11
SMC5-203ENST00000475540 GATA3P23771 443 aa8.11□□□□□ -1.11
SMC5-203ENST00000475540 ERCC6LQ2NKX8 1250 aa8.11□□□□□ -1.11
SMC5-203ENST00000475540 MINDY4Q4G0A6 757 aa8.11□□□□□ -1.11
SMC5-203ENST00000475540 DAAM2Q86T65 1068 aa8.11□□□□□ -1.11
SMC5-203ENST00000475540 ADGRG5Q8IZF4 528 aa8.11□□□□□ -1.11
SMC5-203ENST00000475540 SSH3Q8TE77 659 aa8.11□□□□□ -1.11
SMC5-203ENST00000475540 TAAR9Q96RI9 348 aa8.11□□□□□ -1.11
SMC5-203ENST00000475540 ANLNQ9NQW6 1124 aa8.11□□□□□ -1.11
SMC5-203ENST00000475540 KCTD5Q9NXV2 234 aa8.11□□□□□ -1.11
SMC5-203ENST00000475540 C11orf21Q9P2W6 132 aa8.11□□□□□ -1.11
SMC5-203ENST00000475540 AGAP1Q9UPQ3 857 aa8.11□□□□□ -1.11
SMC5-203ENST00000475540 A0A088AWK7 358 aa8.1□□□□□ -1.11
SMC5-203ENST00000475540 PPM1GO15355 546 aaPredicted RBP8.1□□□□□ -1.11
SMC5-203ENST00000475540 PEX1O43933 1283 aa8.1□□□□□ -1.11
SMC5-203ENST00000475540 SOAT2O75908 522 aa8.1□□□□□ -1.11
SMC5-203ENST00000475540 KIF20AO95235 890 aa8.1□□□□□ -1.11
SMC5-203ENST00000475540 SCGB1D2O95969 90 aa8.1□□□□□ -1.11
SMC5-203ENST00000475540 SRGNP10124 158 aa8.1□□□□□ -1.11
SMC5-203ENST00000475540 HTR1BP28222 390 aa8.1□□□□□ -1.11
SMC5-203ENST00000475540 KCNJ5P48544 419 aa8.1□□□□□ -1.11
SMC5-203ENST00000475540 EXOSC9Q06265 439 aaKnown RBP8.1□□□□□ -1.11
SMC5-203ENST00000475540 LRRC41Q15345 812 aa8.1□□□□□ -1.11
SMC5-203ENST00000475540 SF3B3Q15393 1217 aaKnown RBP8.1□□□□□ -1.11
SMC5-203ENST00000475540 TINAGL1Q9GZM7 467 aaPredicted RBP8.1□□□□□ -1.11
SMC5-203ENST00000475540 LRIT1Q9P2V4 623 aa8.1□□□□□ -1.11
SMC5-203ENST00000475540 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.1□□□□□ -1.11
SMC5-203ENST00000475540 SPATA31A3Q5VYP0 1347 aa8.09□□□□□ -1.11
SMC5-203ENST00000475540 F5H697 171 aa8.09□□□□□ -1.11
SMC5-203ENST00000475540 VPS4BO75351 444 aa8.09□□□□□ -1.11
SMC5-203ENST00000475540 HDCP19113 662 aa8.09□□□□□ -1.11
SMC5-203ENST00000475540 ADRA1BP35368 520 aa8.09□□□□□ -1.11
SMC5-203ENST00000475540 NPTX2P47972 431 aa8.09□□□□□ -1.11
SMC5-203ENST00000475540 SOX8P57073 446 aa8.09□□□□□ -1.11
SMC5-203ENST00000475540 MC2RQ01718 297 aa8.09□□□□□ -1.11
SMC5-203ENST00000475540 EMC10Q5UCC4 262 aa8.09□□□□□ -1.11
SMC5-203ENST00000475540 OLFML1Q6UWY5 402 aa8.09□□□□□ -1.11
SMC5-203ENST00000475540 TMPRSS9Q7Z410 1059 aa8.09□□□□□ -1.11
SMC5-203ENST00000475540 TCEAL8Q8IYN2 117 aa8.09□□□□□ -1.11
SMC5-203ENST00000475540 PLBD2Q8NHP8 589 aa8.09□□□□□ -1.11
SMC5-203ENST00000475540 SLC30A5Q8TAD4 765 aa8.09□□□□□ -1.11
SMC5-203ENST00000475540 PPP1R35Q8TAP8 253 aa8.09□□□□□ -1.11
SMC5-203ENST00000475540 ETAA1Q9NY74 926 aa8.09□□□□□ -1.11
SMC5-203ENST00000475540 GABBR1Q9UBS5 961 aa8.09□□□□□ -1.11
SMC5-203ENST00000475540 CPA4Q9UI42 421 aa8.09□□□□□ -1.11
SMC5-203ENST00000475540 M0QYG6 137 aa8.08□□□□□ -1.12
SMC5-203ENST00000475540 TRIAP1O43715 76 aa8.08□□□□□ -1.12
SMC5-203ENST00000475540 LMNAP02545 664 aaKnown RBP8.08□□□□□ -1.12
SMC5-203ENST00000475540 CXCR5P32302 372 aa8.08□□□□□ -1.12
SMC5-203ENST00000475540 FOLR3P41439 243 aa8.08□□□□□ -1.12
SMC5-203ENST00000475540 INHBEP58166 350 aa8.08□□□□□ -1.12
SMC5-203ENST00000475540 RAB1AP62820 205 aa8.08□□□□□ -1.12
SMC5-203ENST00000475540 AMOTQ4VCS5 1084 aa8.08□□□□□ -1.12
SMC5-203ENST00000475540 FAM160B1Q5W0V3 765 aa8.08□□□□□ -1.12
SMC5-203ENST00000475540 NXNQ6DKJ4 435 aa8.08□□□□□ -1.12
SMC5-203ENST00000475540 VWA1Q6PCB0 445 aa8.08□□□□□ -1.12
SMC5-203ENST00000475540 PCSK9Q8NBP7 692 aaKnown RBP8.08□□□□□ -1.12
SMC5-203ENST00000475540 ZBTB34Q8NCN2 500 aa8.08□□□□□ -1.12
SMC5-203ENST00000475540 PSD4Q8NDX1 1056 aa8.08□□□□□ -1.12
SMC5-203ENST00000475540 RAD54BQ9Y620 910 aa8.08□□□□□ -1.12
SMC5-203ENST00000475540 A0A0B4J269 797 aa8.07□□□□□ -1.12
SMC5-203ENST00000475540 YY2O15391 372 aa8.07□□□□□ -1.12
SMC5-203ENST00000475540 MRPS35P82673 323 aaKnown RBP8.07□□□□□ -1.12
SMC5-203ENST00000475540 COL10A1Q03692 680 aa8.07□□□□□ -1.12
SMC5-203ENST00000475540 TCF15Q12870 199 aa8.07□□□□□ -1.12
SMC5-203ENST00000475540 TUBB3Q13509 450 aa8.07□□□□□ -1.12
SMC5-203ENST00000475540 SMN1Q16637 294 aaKnown RBP8.07□□□□□ -1.12
SMC5-203ENST00000475540 TAF2Q6P1X5 1199 aa8.07□□□□□ -1.12
SMC5-203ENST00000475540 FAM9AQ8IZU1 332 aaPredicted RBP8.07□□□□□ -1.12
SMC5-203ENST00000475540 FAM46DQ8NEK8 389 aa8.07□□□□□ -1.12
SMC5-203ENST00000475540 ZG16BQ96DA0 208 aa8.07□□□□□ -1.12
SMC5-203ENST00000475540 LRFN3Q9BTN0 628 aa8.07□□□□□ -1.12
SMC5-203ENST00000475540 MRPS18AQ9NVS2 196 aaKnown RBP8.07□□□□□ -1.12
SMC5-203ENST00000475540 PIH1D1Q9NWS0 290 aaKnown RBP8.07□□□□□ -1.12
SMC5-203ENST00000475540 STAP2Q9UGK3 403 aa8.07□□□□□ -1.12
SMC5-203ENST00000475540 ZNHIT2Q9UHR6 403 aa8.07□□□□□ -1.12
SMC5-203ENST00000475540 PRPF3O43395 683 aaKnown RBP8.06□□□□□ -1.12
SMC5-203ENST00000475540 SUV39H1O43463 412 aa8.06□□□□□ -1.12
SMC5-203ENST00000475540 ITGALP20701 1170 aa8.06□□□□□ -1.12
SMC5-203ENST00000475540 BMP5P22003 454 aa8.06□□□□□ -1.12
SMC5-203ENST00000475540 PLA2G5P39877 138 aa8.06□□□□□ -1.12
SMC5-203ENST00000475540 NDUFV1P49821 464 aa8.06□□□□□ -1.12
SMC5-203ENST00000475540 GPSM2P81274 684 aa8.06□□□□□ -1.12
SMC5-203ENST00000475540 MLC1Q15049 377 aa8.06□□□□□ -1.12
SMC5-203ENST00000475540 ANO6Q4KMQ2 910 aa8.06□□□□□ -1.12
SMC5-203ENST00000475540 PPP1R32Q7Z5V6 425 aa8.06□□□□□ -1.12
SMC5-203ENST00000475540 MAGEB6Q8N7X4 407 aa8.06□□□□□ -1.12
SMC5-203ENST00000475540 B3GALNT2Q8NCR0 500 aa8.06□□□□□ -1.12
SMC5-203ENST00000475540 TOR1AIP2Q8NFQ8 470 aa8.06□□□□□ -1.12
SMC5-203ENST00000475540 FBXO41Q8TF61 875 aa8.06□□□□□ -1.12
SMC5-203ENST00000475540 FBXL20Q96IG2 436 aa8.06□□□□□ -1.12
SMC5-203ENST00000475540 PGBD1Q96JS3 809 aa8.06□□□□□ -1.12
SMC5-203ENST00000475540 HEPHQ9BQS7 1158 aa8.06□□□□□ -1.12
SMC5-203ENST00000475540 SMOC2Q9H3U7 446 aa8.06□□□□□ -1.12
SMC5-203ENST00000475540 SALL3Q9BXA9 1300 aa8.05□□□□□ -1.12
SMC5-203ENST00000475540 GOLGA6CA6NDK9 693 aa8.05□□□□□ -1.12
SMC5-203ENST00000475540 GOLGA6BA6NDN3 693 aa8.05□□□□□ -1.12
SMC5-203ENST00000475540 TSPAN6O43657 245 aa8.05□□□□□ -1.12
SMC5-203ENST00000475540 TUSC2O75896 110 aa8.05□□□□□ -1.12
SMC5-203ENST00000475540 GOLGA6DP0CG33 693 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms