RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 TMEM209Q96SK2 561 aa22.22■■□□□ 1.15
VPS36-203ENST00000475375 SEPT5Q99719 369 aaPredicted RBP22.22■■□□□ 1.15
VPS36-203ENST00000475375 LLPHQ9BRT6 129 aaKnown RBP22.22■■□□□ 1.15
VPS36-203ENST00000475375 OBP2AQ9NY56 170 aa22.22■■□□□ 1.15
VPS36-203ENST00000475375 CNOT1A5YKK6 2376 aaKnown RBP22.22■■□□□ 1.15
VPS36-203ENST00000475375 USP24Q9UPU5 2620 aa22.22■■□□□ 1.15
VPS36-203ENST00000475375 SDK1Q7Z5N4 2213 aa22.22■■□□□ 1.15
VPS36-203ENST00000475375 LACTBL1A8MY62 500 aa22.21■■□□□ 1.15
VPS36-203ENST00000475375 RPP40O75818 363 aaKnown RBP22.21■■□□□ 1.15
VPS36-203ENST00000475375 PRAMEF12O95522 483 aa22.21■■□□□ 1.15
VPS36-203ENST00000475375 CCDC192P0DO97 292 aa22.21■■□□□ 1.15
VPS36-203ENST00000475375 ODC1P11926 461 aa22.21■■□□□ 1.15
VPS36-203ENST00000475375 TYMPP19971 482 aa22.21■■□□□ 1.15
VPS36-203ENST00000475375 CYP3A5P20815 502 aa22.21■■□□□ 1.15
VPS36-203ENST00000475375 TAF12Q16514 161 aa22.21■■□□□ 1.15
VPS36-203ENST00000475375 PLIN2Q99541 437 aa22.21■■□□□ 1.15
VPS36-203ENST00000475375 LPIN3Q9BQK8 851 aa22.21■■□□□ 1.15
VPS36-203ENST00000475375 HAPLN2Q9GZV7 340 aa22.21■■□□□ 1.15
VPS36-203ENST00000475375 SMG9Q9H0W8 520 aaKnown RBP22.21■■□□□ 1.15
VPS36-203ENST00000475375 LAD1O00515 517 aa22.2■■□□□ 1.14
VPS36-203ENST00000475375 LIG4P49917 911 aa22.2■■□□□ 1.14
VPS36-203ENST00000475375 TOB1P50616 345 aaPredicted RBP22.2■■□□□ 1.14
VPS36-203ENST00000475375 HMGN5P82970 282 aaKnown RBP22.2■■□□□ 1.14
VPS36-203ENST00000475375 PTPAQ15257 358 aa22.2■■□□□ 1.14
VPS36-203ENST00000475375 ZBTB6Q15916 424 aa22.2■■□□□ 1.14
VPS36-203ENST00000475375 MGAT5BQ3V5L5 792 aa22.2■■□□□ 1.14
VPS36-203ENST00000475375 CACNA2D4Q7Z3S7 1137 aa22.2■■□□□ 1.14
VPS36-203ENST00000475375 GAB3Q8WWW8 586 aa22.2■■□□□ 1.14
VPS36-203ENST00000475375 SENP8Q96LD8 212 aa22.2■■□□□ 1.14
VPS36-203ENST00000475375 MMTAG2Q9BU76 263 aaKnown RBP22.2■■□□□ 1.14
VPS36-203ENST00000475375 TASP1Q9H6P5 420 aa22.2■■□□□ 1.14
VPS36-203ENST00000475375 RPF1Q9H9Y2 349 aaKnown RBP22.2■■□□□ 1.14
VPS36-203ENST00000475375 SLC8A2Q9UPR5 921 aa22.2■■□□□ 1.14
VPS36-203ENST00000475375 PPEF2O14830 753 aa22.19■■□□□ 1.14
VPS36-203ENST00000475375 CDC25CP30307 473 aa22.19■■□□□ 1.14
VPS36-203ENST00000475375 MCM2P49736 904 aa22.19■■□□□ 1.14
VPS36-203ENST00000475375 LIMK1P53667 647 aa22.19■■□□□ 1.14
VPS36-203ENST00000475375 CACNB1Q02641 598 aaPredicted RBP22.19■■□□□ 1.14
VPS36-203ENST00000475375 IL17AQ16552 155 aa22.19■■□□□ 1.14
VPS36-203ENST00000475375 KYAT1Q16773 422 aa22.19■■□□□ 1.14
VPS36-203ENST00000475375 SLC39A12Q504Y0 691 aa22.19■■□□□ 1.14
VPS36-203ENST00000475375 N4BP2L1Q5TBK1 243 aaPredicted RBP22.19■■□□□ 1.14
VPS36-203ENST00000475375 CDK5RAP3Q96JB5 506 aa22.19■■□□□ 1.14
VPS36-203ENST00000475375 H0YCG3 227 aa22.18■■□□□ 1.14
VPS36-203ENST00000475375 HNRNPDLO14979 420 aaKnown RBP22.18■■□□□ 1.14
VPS36-203ENST00000475375 ZNF806P0C7X5 589 aa22.18■■□□□ 1.14
VPS36-203ENST00000475375 PRPHP41219 470 aa22.18■■□□□ 1.14
VPS36-203ENST00000475375 TUFMP49411 452 aaKnown RBP22.18■■□□□ 1.14
VPS36-203ENST00000475375 LILRA4P59901 499 aa22.18■■□□□ 1.14
VPS36-203ENST00000475375 GRSF1Q12849 480 aaKnown RBP eCLIP22.18■■□□□ 1.14
VPS36-203ENST00000475375 ENOX2Q16206 610 aaKnown RBP22.18■■□□□ 1.14
VPS36-203ENST00000475375 PKN3Q6P5Z2 889 aa22.18■■□□□ 1.14
VPS36-203ENST00000475375 KBTBD6Q86V97 674 aa22.18■■□□□ 1.14
VPS36-203ENST00000475375 LOXL4Q96JB6 756 aa22.18■■□□□ 1.14
VPS36-203ENST00000475375 GKN1Q9NS71 199 aa22.18■■□□□ 1.14
VPS36-203ENST00000475375 LARSQ9P2J5 1176 aaKnown RBP22.18■■□□□ 1.14
VPS36-203ENST00000475375 NPHP3-ACAD11A0A0J9YXS1 232 aa22.17■■□□□ 1.14
VPS36-203ENST00000475375 ATG13O75143 517 aa22.17■■□□□ 1.14
VPS36-203ENST00000475375 EPN2O95208 641 aa22.17■■□□□ 1.14
VPS36-203ENST00000475375 U2AF2P26368 475 aaKnown RBP eCLIP22.17■■□□□ 1.14
VPS36-203ENST00000475375 STPG1Q5TH74 334 aa22.17■■□□□ 1.14
VPS36-203ENST00000475375 SPATA1Q5VX52 437 aa22.17■■□□□ 1.14
VPS36-203ENST00000475375 JADE1Q6IE81 842 aa22.17■■□□□ 1.14
VPS36-203ENST00000475375 SYT2Q8N9I0 419 aaPredicted RBP22.17■■□□□ 1.14
VPS36-203ENST00000475375 OR10T2Q8NGX3 314 aa22.17■■□□□ 1.14
VPS36-203ENST00000475375 GIPC2Q8TF65 315 aa22.17■■□□□ 1.14
VPS36-203ENST00000475375 RXFP3Q9NSD7 469 aa22.17■■□□□ 1.14
VPS36-203ENST00000475375 HSFX1Q9UBD0 423 aa22.17■■□□□ 1.14
VPS36-203ENST00000475375 CHD6Q8TD26 2715 aa22.16■■□□□ 1.14
VPS36-203ENST00000475375 NUP210Q8TEM1 1887 aaPredicted RBP22.16■■□□□ 1.14
VPS36-203ENST00000475375 OGTO15294 1046 aa22.16■■□□□ 1.14
VPS36-203ENST00000475375 WEE1P30291 646 aa22.16■■□□□ 1.14
VPS36-203ENST00000475375 METTL23Q86XA0 190 aa22.16■■□□□ 1.14
VPS36-203ENST00000475375 SLC46A2Q9BY10 475 aa22.16■■□□□ 1.14
VPS36-203ENST00000475375 SMOC1Q9H4F8 434 aa22.16■■□□□ 1.14
VPS36-203ENST00000475375 PLA2G4BP0C869 781 aa22.15■■□□□ 1.14
VPS36-203ENST00000475375 ATF6P18850 670 aa22.15■■□□□ 1.14
VPS36-203ENST00000475375 PMLP29590 882 aa22.15■■□□□ 1.14
VPS36-203ENST00000475375 AVPR1AP37288 418 aa22.15■■□□□ 1.14
VPS36-203ENST00000475375 RAP1GAPP47736 663 aa22.15■■□□□ 1.14
VPS36-203ENST00000475375 SLC12A3P55017 1021 aa22.15■■□□□ 1.14
VPS36-203ENST00000475375 NCKAP1LP55160 1127 aa22.15■■□□□ 1.14
VPS36-203ENST00000475375 BFSP1Q12934 665 aa22.15■■□□□ 1.14
VPS36-203ENST00000475375 FSTL4Q6MZW2 842 aa22.15■■□□□ 1.14
VPS36-203ENST00000475375 CMTM8Q8IZV2 173 aa22.15■■□□□ 1.14
VPS36-203ENST00000475375 PNMA5Q96PV4 448 aa22.15■■□□□ 1.14
VPS36-203ENST00000475375 TSPAN18Q96SJ8 248 aa22.15■■□□□ 1.14
VPS36-203ENST00000475375 MSTO1Q9BUK6 570 aa22.15■■□□□ 1.14
VPS36-203ENST00000475375 EBF3Q9H4W6 596 aa22.15■■□□□ 1.14
VPS36-203ENST00000475375 IL21Q9HBE4 155 aa22.15■■□□□ 1.14
VPS36-203ENST00000475375 KCND2Q9NZV8 630 aa22.15■■□□□ 1.14
VPS36-203ENST00000475375 DSEQ9UL01 958 aa22.15■■□□□ 1.14
VPS36-203ENST00000475375 CACNA1GO43497 2377 aa22.14■■□□□ 1.14
VPS36-203ENST00000475375 MYH11P35749 1972 aa22.14■■□□□ 1.14
VPS36-203ENST00000475375 CCDC163A0A0D9SF12 145 aa22.14■■□□□ 1.13
VPS36-203ENST00000475375 K7ENM7 598 aa22.14■■□□□ 1.13
VPS36-203ENST00000475375 PAX3P23760 479 aa22.14■■□□□ 1.13
VPS36-203ENST00000475375 RUNX3Q13761 415 aa22.14■■□□□ 1.13
VPS36-203ENST00000475375 TMEM132DQ14C87 1099 aa22.14■■□□□ 1.13
VPS36-203ENST00000475375 TMEM196Q5HYL7 178 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms