RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 MARK3P27448 753 aa17.22■□□□□ 0.35
TPR-205ENST00000474852 PTPN4P29074 926 aa17.22■□□□□ 0.35
TPR-205ENST00000474852 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.22■□□□□ 0.35
TPR-205ENST00000474852 TRIM11Q96F44 468 aa17.22■□□□□ 0.35
TPR-205ENST00000474852 MFSD14AQ96MC6 490 aa17.22■□□□□ 0.35
TPR-205ENST00000474852 PSMC3IPQ9P2W1 217 aaPredicted RBP17.22■□□□□ 0.35
TPR-205ENST00000474852 IVNS1ABPQ9Y6Y0 642 aa17.22■□□□□ 0.35
TPR-205ENST00000474852 GNA15P30679 374 aa17.22■□□□□ 0.35
TPR-205ENST00000474852 BRDTQ58F21 947 aaPredicted RBP17.22■□□□□ 0.35
TPR-205ENST00000474852 WDR44Q5JSH3 913 aa17.22■□□□□ 0.35
TPR-205ENST00000474852 STRIP1Q5VSL9 837 aa17.22■□□□□ 0.35
TPR-205ENST00000474852 TMEM154Q6P9G4 183 aa17.22■□□□□ 0.35
TPR-205ENST00000474852 RFX8Q6ZV50 586 aa17.22■□□□□ 0.35
TPR-205ENST00000474852 NLRX1Q86UT6 975 aa17.22■□□□□ 0.35
TPR-205ENST00000474852 DTX3LQ8TDB6 740 aa17.22■□□□□ 0.35
TPR-205ENST00000474852 TTC25Q96NG3 672 aa17.22■□□□□ 0.35
TPR-205ENST00000474852 FBXO6Q9NRD1 293 aaPredicted RBP17.22■□□□□ 0.35
TPR-205ENST00000474852 ETAA1Q9NY74 926 aa17.22■□□□□ 0.35
TPR-205ENST00000474852 SLC17A7Q9P2U7 560 aa17.22■□□□□ 0.35
TPR-205ENST00000474852 PCDHB4Q9Y5E5 795 aa17.22■□□□□ 0.35
TPR-205ENST00000474852 CYP1A1P04798 512 aaPredicted RBP17.21■□□□□ 0.35
TPR-205ENST00000474852 ACOT2P49753 483 aa17.21■□□□□ 0.35
TPR-205ENST00000474852 RCN1Q15293 331 aa17.21■□□□□ 0.35
TPR-205ENST00000474852 TSNAXIP1Q2TAA8 658 aa17.21■□□□□ 0.35
TPR-205ENST00000474852 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.21■□□□□ 0.35
TPR-205ENST00000474852 GPD1LQ8N335 351 aa17.21■□□□□ 0.35
TPR-205ENST00000474852 OGFOD1Q8N543 542 aa17.21■□□□□ 0.35
TPR-205ENST00000474852 TMEM174Q8WUU8 243 aa17.21■□□□□ 0.35
TPR-205ENST00000474852 UCMAQ8WVF2 138 aa17.21■□□□□ 0.35
TPR-205ENST00000474852 CADM1Q9BY67 442 aaKnown RBP17.21■□□□□ 0.35
TPR-205ENST00000474852 ST6GALNAC4Q9H4F1 302 aa17.21■□□□□ 0.35
TPR-205ENST00000474852 NMRK1Q9NWW6 199 aa17.21■□□□□ 0.35
TPR-205ENST00000474852 LOXHD1Q8IVV2 1947 aa17.21■□□□□ 0.35
TPR-205ENST00000474852 F8VP50 259 aa17.21■□□□□ 0.35
TPR-205ENST00000474852 SMIM24O75264 130 aa17.21■□□□□ 0.35
TPR-205ENST00000474852 HLA-DRAP01903 254 aa17.21■□□□□ 0.35
TPR-205ENST00000474852 CETN2P41208 172 aa17.21■□□□□ 0.35
TPR-205ENST00000474852 GPX6P59796 221 aa17.21■□□□□ 0.35
TPR-205ENST00000474852 NOMO3P69849 1222 aa17.21■□□□□ 0.35
TPR-205ENST00000474852 CENPUQ71F23 418 aa17.21■□□□□ 0.35
TPR-205ENST00000474852 ANO5Q75V66 913 aa17.21■□□□□ 0.35
TPR-205ENST00000474852 TEX9Q8N6V9 391 aa17.21■□□□□ 0.35
TPR-205ENST00000474852 TMC2Q8TDI7 906 aa17.21■□□□□ 0.35
TPR-205ENST00000474852 TCP10LQ8TDR4 215 aa17.21■□□□□ 0.35
TPR-205ENST00000474852 PTPRN2Q92932 1015 aa17.21■□□□□ 0.35
TPR-205ENST00000474852 SLITRK1Q96PX8 696 aa17.21■□□□□ 0.35
TPR-205ENST00000474852 MRPL47Q9HD33 250 aaKnown RBP17.21■□□□□ 0.35
TPR-205ENST00000474852 ARL8BQ9NVJ2 186 aa17.21■□□□□ 0.35
TPR-205ENST00000474852 HEY2Q9UBP5 337 aa17.21■□□□□ 0.35
TPR-205ENST00000474852 KAT6AQ92794 2004 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 TESPA1A2RU30 521 aaPredicted RBP17.2■□□□□ 0.34
TPR-205ENST00000474852 LRRD1A4D1F6 860 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 ANKRD33BA6NCL7 494 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 SNUPNO95149 360 aaKnown RBP17.2■□□□□ 0.34
TPR-205ENST00000474852 CCNE2O96020 404 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 PTP4A2Q12974 167 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 WDR72Q3MJ13 1102 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 EAPPQ56P03 285 aaPredicted RBP17.2■□□□□ 0.34
TPR-205ENST00000474852 RGS9BPQ6ZS82 235 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 USP37Q86T82 979 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 LRRC6Q86X45 466 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 TDRPQ86YL5 185 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 ALLCQ8N6M5 410 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 ENDOVQ8N8Q3 282 aaKnown RBP17.2■□□□□ 0.34
TPR-205ENST00000474852 FNBP1Q96RU3 617 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 DLGAP2Q9P1A6 1054 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 KANSL3Q9P2N6 904 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 PTPRJQ12913 1337 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 MYH9P35579 1960 aaKnown RBP17.2■□□□□ 0.34
TPR-205ENST00000474852 C2CD2LO14523 706 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 KRT36O76013 467 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 TROVE2P10155 538 aaKnown RBP eCLIP17.2■□□□□ 0.34
TPR-205ENST00000474852 NEFHP12036 1026 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 NPR1P16066 1061 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 LMNB2Q03252 620 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 ZBTB16Q05516 673 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 KPNB1Q14974 876 aaKnown RBP17.2■□□□□ 0.34
TPR-205ENST00000474852 CTC1Q2NKJ3 1217 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 SLC45A4Q5BKX6 768 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 WASHC2DQ5SRD0 308 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 SYCP2LQ5T4T6 812 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 C4orf50Q6ZRC1 276 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 SCYL3Q8IZE3 742 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 PIDD1Q9HB75 910 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 SENP1Q9P0U3 644 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 NRXN2Q9P2S2 1712 aa17.2■□□□□ 0.34
TPR-205ENST00000474852 NVLO15381 856 aaKnown RBP17.19■□□□□ 0.34
TPR-205ENST00000474852 ZBED4O75132 1171 aa17.19■□□□□ 0.34
TPR-205ENST00000474852 GLRA2P23416 452 aa17.19■□□□□ 0.34
TPR-205ENST00000474852 RFC5P40937 340 aa17.19■□□□□ 0.34
TPR-205ENST00000474852 PSMC5P62195 406 aa17.19■□□□□ 0.34
TPR-205ENST00000474852 KLC1Q07866 573 aa17.19■□□□□ 0.34
TPR-205ENST00000474852 HIF1AQ16665 826 aa17.19■□□□□ 0.34
TPR-205ENST00000474852 MSS51Q4VC12 460 aa17.19■□□□□ 0.34
TPR-205ENST00000474852 RNASEH2BQ5TBB1 312 aaKnown RBP17.19■□□□□ 0.34
TPR-205ENST00000474852 ANKRD22Q5VYY1 191 aa17.19■□□□□ 0.34
TPR-205ENST00000474852 TDRD10Q5VZ19 366 aaKnown RBP17.19■□□□□ 0.34
TPR-205ENST00000474852 SCARA3Q6AZY7 606 aa17.19■□□□□ 0.34
TPR-205ENST00000474852 CEP170P1Q96L14 293 aa17.19■□□□□ 0.34
TPR-205ENST00000474852 MCEEQ96PE7 176 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms