RNA–Protein interactions for RNA: ENST00000474288.1

HUWE1-209, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene HUWE1, Length 1,254 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-209ENST00000474288 CDR2Q01850 454 aa11.32□□□□□ -0.6
HUWE1-209ENST00000474288 MTF1Q14872 753 aa11.32□□□□□ -0.6
HUWE1-209ENST00000474288 SLC18A3Q16572 532 aa11.32□□□□□ -0.6
HUWE1-209ENST00000474288 TDRD12Q587J7 1177 aaKnown RBP11.32□□□□□ -0.6
HUWE1-209ENST00000474288 SCARA5Q6ZMJ2 495 aa11.32□□□□□ -0.6
HUWE1-209ENST00000474288 OTOP2Q7RTS6 562 aa11.32□□□□□ -0.6
HUWE1-209ENST00000474288 NOP9Q86U38 636 aaKnown RBP11.32□□□□□ -0.6
HUWE1-209ENST00000474288 SLC47A2Q86VL8 602 aa11.32□□□□□ -0.6
HUWE1-209ENST00000474288 ADGRF2Q8IZF7 708 aa11.32□□□□□ -0.6
HUWE1-209ENST00000474288 APPL2Q8NEU8 664 aa11.32□□□□□ -0.6
HUWE1-209ENST00000474288 LNX1Q8TBB1 728 aaPredicted RBP11.32□□□□□ -0.6
HUWE1-209ENST00000474288 ELOVL4Q9GZR5 314 aa11.32□□□□□ -0.6
HUWE1-209ENST00000474288 CACNG4Q9UBN1 327 aa11.32□□□□□ -0.6
HUWE1-209ENST00000474288 DNAJB4Q9UDY4 337 aa11.32□□□□□ -0.6
HUWE1-209ENST00000474288 HMGXB4Q9UGU5 601 aa11.32□□□□□ -0.6
HUWE1-209ENST00000474288 DSEQ9UL01 958 aa11.32□□□□□ -0.6
HUWE1-209ENST00000474288 PCDHB8Q9UN66 801 aa11.32□□□□□ -0.6
HUWE1-209ENST00000474288 PCDHGC3Q9UN70 934 aa11.32□□□□□ -0.6
HUWE1-209ENST00000474288 STXBP5LQ9Y2K9 1186 aa11.32□□□□□ -0.6
HUWE1-209ENST00000474288 REXO2Q9Y3B8 237 aaKnown RBP11.32□□□□□ -0.6
HUWE1-209ENST00000474288 ADGRG1Q9Y653 693 aa11.32□□□□□ -0.6
HUWE1-209ENST00000474288 RANBP2P49792 3224 aaKnown RBP11.32□□□□□ -0.6
HUWE1-209ENST00000474288 TNRC18O15417 2968 aaPredicted RBP11.31□□□□□ -0.6
HUWE1-209ENST00000474288 A0A087X0T9 212 aa11.31□□□□□ -0.6
HUWE1-209ENST00000474288 CYB561D2O14569 222 aa11.31□□□□□ -0.6
HUWE1-209ENST00000474288 NRP1O14786 923 aa11.31□□□□□ -0.6
HUWE1-209ENST00000474288 FAM228BP0C875 321 aa11.31□□□□□ -0.6
HUWE1-209ENST00000474288 ODC1P11926 461 aa11.31□□□□□ -0.6
HUWE1-209ENST00000474288 GZMAP12544 262 aa11.31□□□□□ -0.6
HUWE1-209ENST00000474288 KRT5P13647 590 aa11.31□□□□□ -0.6
HUWE1-209ENST00000474288 CDH5P33151 784 aaPredicted RBP11.31□□□□□ -0.6
HUWE1-209ENST00000474288 SLC11A1P49279 550 aa11.31□□□□□ -0.6
HUWE1-209ENST00000474288 PDE6CP51160 858 aa11.31□□□□□ -0.6
HUWE1-209ENST00000474288 NDST1P52848 882 aa11.31□□□□□ -0.6
HUWE1-209ENST00000474288 RNASELQ05823 741 aaKnown RBP11.31□□□□□ -0.6
HUWE1-209ENST00000474288 C10orf76Q5T2E6 689 aa11.31□□□□□ -0.6
HUWE1-209ENST00000474288 ARHGAP17Q68EM7 881 aa11.31□□□□□ -0.6
HUWE1-209ENST00000474288 TRIM72Q6ZMU5 477 aa11.31□□□□□ -0.6
HUWE1-209ENST00000474288 VPS36Q86VN1 386 aa11.31□□□□□ -0.6
HUWE1-209ENST00000474288 ZSCAN30Q86W11 494 aa11.31□□□□□ -0.6
HUWE1-209ENST00000474288 OSTM1Q86WC4 334 aa11.31□□□□□ -0.6
HUWE1-209ENST00000474288 SLC20A1Q8WUM9 679 aa11.31□□□□□ -0.6
HUWE1-209ENST00000474288 CLP1Q92989 425 aaKnown RBP11.31□□□□□ -0.6
HUWE1-209ENST00000474288 TMEM176AQ96HP8 235 aa11.31□□□□□ -0.6
HUWE1-209ENST00000474288 CCDC42Q96M95 316 aa11.31□□□□□ -0.6
HUWE1-209ENST00000474288 AGPAT1Q99943 283 aa11.31□□□□□ -0.6
HUWE1-209ENST00000474288 ZSWIM1Q9BR11 485 aa11.31□□□□□ -0.6
HUWE1-209ENST00000474288 NT5C1AQ9BXI3 368 aa11.31□□□□□ -0.6
HUWE1-209ENST00000474288 CXXC1Q9P0U4 656 aaPredicted RBP11.31□□□□□ -0.6
HUWE1-209ENST00000474288 NAGPAQ9UK23 515 aa11.31□□□□□ -0.6
HUWE1-209ENST00000474288 ADAM28Q9UKQ2 775 aa11.31□□□□□ -0.6
HUWE1-209ENST00000474288 ZMYND8Q9ULU4 1186 aaPredicted RBP11.31□□□□□ -0.6
HUWE1-209ENST00000474288 NR2E3Q9Y5X4 410 aa11.31□□□□□ -0.6
HUWE1-209ENST00000474288 CCDC85CA6NKD9 419 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 F8W810 466 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 TULP1O00294 542 aaPredicted RBP11.3□□□□□ -0.6
HUWE1-209ENST00000474288 PJA2O43164 708 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 OAZ2O95190 189 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 CYP1A1P04798 512 aaPredicted RBP11.3□□□□□ -0.6
HUWE1-209ENST00000474288 ALDH2P05091 517 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 VDRP11473 427 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 SYN1P17600 705 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 CD58P19256 250 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 FGFR3P22607 806 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 GNA15P30679 374 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 LHX1P48742 406 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 BCAR1P56945 870 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 ARID5AQ03989 594 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 ELAVL2Q12926 359 aaKnown RBP11.3□□□□□ -0.6
HUWE1-209ENST00000474288 MRPL58Q14197 206 aaKnown RBP11.3□□□□□ -0.6
HUWE1-209ENST00000474288 STILQ15468 1287 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 WSCD1Q658N2 575 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 TOGARAM2Q6ZUX3 1019 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 PALB2Q86YC2 1186 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 HERC6Q8IVU3 1022 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 GPR65Q8IYL9 337 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 TNS4Q8IZW8 715 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 ZNF606Q8WXB4 792 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 FAM193BQ96PV7 902 aaPredicted RBP11.3□□□□□ -0.6
HUWE1-209ENST00000474288 MMS19Q96T76 1030 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 PCDHB18PQ96TA0 734 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 PKMYT1Q99640 499 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 LBHD1Q9BQE6 289 aaPredicted RBP11.3□□□□□ -0.6
HUWE1-209ENST00000474288 RTP3Q9BQQ7 232 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 COLEC11Q9BWP8 271 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 ISCUQ9H1K1 167 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 MTIF3Q9H2K0 278 aaKnown RBP11.3□□□□□ -0.6
HUWE1-209ENST00000474288 ACP6Q9NPH0 428 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 HCSTQ9UBK5 93 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 ADAMTS1Q9UHI8 967 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 FAN1Q9Y2M0 1017 aa11.3□□□□□ -0.6
HUWE1-209ENST00000474288 SF3B1O75533 1304 aaKnown RBP eCLIP11.3□□□□□ -0.6
HUWE1-209ENST00000474288 PTPRDP23468 1912 aa11.29□□□□□ -0.6
HUWE1-209ENST00000474288 O00370 1275 aa11.29□□□□□ -0.6
HUWE1-209ENST00000474288 TRAPPC3O43617 180 aa11.29□□□□□ -0.6
HUWE1-209ENST00000474288 AKR1B10O60218 316 aa11.29□□□□□ -0.6
HUWE1-209ENST00000474288 TBC1D4O60343 1298 aa11.29□□□□□ -0.6
HUWE1-209ENST00000474288 UPP2O95045 317 aa11.29□□□□□ -0.6
HUWE1-209ENST00000474288 LSM8O95777 96 aaKnown RBP11.29□□□□□ -0.6
HUWE1-209ENST00000474288 MMEP08473 750 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms