RNA–Protein interactions for RNA: ENST00000474144.5

TMEM54-204, Transcript of transmembrane protein 54, humanhuman

TSL 3

Gene TMEM54, Length 748 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-204ENST00000474144 LRRC3Q9BY71 257 aa21.46■■□□□ 1.03
TMEM54-204ENST00000474144 TBC1D17Q9HA65 648 aa21.46■■□□□ 1.03
TMEM54-204ENST00000474144 MAGEF1Q9HAY2 307 aa21.46■■□□□ 1.03
TMEM54-204ENST00000474144 SERTAD1Q9UHV2 236 aa21.46■■□□□ 1.03
TMEM54-204ENST00000474144 DSEQ9UL01 958 aa21.46■■□□□ 1.03
TMEM54-204ENST00000474144 PTPRJQ12913 1337 aa21.46■■□□□ 1.03
TMEM54-204ENST00000474144 ZNF197O14709 1029 aa21.45■■□□□ 1.02
TMEM54-204ENST00000474144 TGFB1I1O43294 461 aa21.45■■□□□ 1.02
TMEM54-204ENST00000474144 FCARP24071 287 aa21.45■■□□□ 1.02
TMEM54-204ENST00000474144 EPHA5P54756 1037 aa21.45■■□□□ 1.02
TMEM54-204ENST00000474144 FAM78AQ5JUQ0 283 aa21.45■■□□□ 1.02
TMEM54-204ENST00000474144 CACTINQ8WUQ7 758 aaKnown RBP21.45■■□□□ 1.02
TMEM54-204ENST00000474144 SCFD1Q8WVM8 642 aa21.45■■□□□ 1.02
TMEM54-204ENST00000474144 ZNF560Q96MR9 790 aa21.45■■□□□ 1.02
TMEM54-204ENST00000474144 MTMR12Q9C0I1 747 aa21.45■■□□□ 1.02
TMEM54-204ENST00000474144 ASAH2Q9NR71 780 aa21.45■■□□□ 1.02
TMEM54-204ENST00000474144 HSPBP1Q9NZL4 362 aa21.45■■□□□ 1.02
TMEM54-204ENST00000474144 SIX4Q9UIU6 781 aa21.45■■□□□ 1.02
TMEM54-204ENST00000474144 CLIC2O15247 247 aa21.44■■□□□ 1.02
TMEM54-204ENST00000474144 ECI2O75521 394 aa21.44■■□□□ 1.02
TMEM54-204ENST00000474144 MICAL2O94851 1124 aa21.44■■□□□ 1.02
TMEM54-204ENST00000474144 KRT19P08727 400 aa21.44■■□□□ 1.02
TMEM54-204ENST00000474144 ALDH1A3P47895 512 aa21.44■■□□□ 1.02
TMEM54-204ENST00000474144 EPHB3P54753 998 aa21.44■■□□□ 1.02
TMEM54-204ENST00000474144 SNW1Q13573 536 aaKnown RBP21.44■■□□□ 1.02
TMEM54-204ENST00000474144 TEAD2Q15562 447 aa21.44■■□□□ 1.02
TMEM54-204ENST00000474144 TMC8Q8IU68 726 aa21.44■■□□□ 1.02
TMEM54-204ENST00000474144 THEM5Q8N1Q8 247 aa21.44■■□□□ 1.02
TMEM54-204ENST00000474144 OR5B17Q8NGF7 314 aa21.44■■□□□ 1.02
TMEM54-204ENST00000474144 SHKBP1Q8TBC3 707 aa21.44■■□□□ 1.02
TMEM54-204ENST00000474144 ATOH1Q92858 354 aaPredicted RBP21.44■■□□□ 1.02
TMEM54-204ENST00000474144 ZNF334Q9HCZ1 680 aaPredicted RBP21.44■■□□□ 1.02
TMEM54-204ENST00000474144 SLC39A2Q9NP94 309 aa21.44■■□□□ 1.02
TMEM54-204ENST00000474144 AGPAT3Q9NRZ7 376 aa21.44■■□□□ 1.02
TMEM54-204ENST00000474144 MYO15AQ9UKN7 3530 aa21.43■■□□□ 1.02
TMEM54-204ENST00000474144 A0A1B0GVL5 298 aa21.43■■□□□ 1.02
TMEM54-204ENST00000474144 ZNF233A6NK53 670 aa21.43■■□□□ 1.02
TMEM54-204ENST00000474144 ACTN4O43707 911 aaKnown RBP21.43■■□□□ 1.02
TMEM54-204ENST00000474144 RFX1P22670 979 aa21.43■■□□□ 1.02
TMEM54-204ENST00000474144 PNPLA4P41247 253 aa21.43■■□□□ 1.02
TMEM54-204ENST00000474144 BFSP1Q12934 665 aa21.43■■□□□ 1.02
TMEM54-204ENST00000474144 PLD1Q13393 1074 aa21.43■■□□□ 1.02
TMEM54-204ENST00000474144 GRM2Q14416 872 aa21.43■■□□□ 1.02
TMEM54-204ENST00000474144 PDCL2Q8N4E4 241 aa21.43■■□□□ 1.02
TMEM54-204ENST00000474144 RDH13Q8NBN7 331 aa21.43■■□□□ 1.02
TMEM54-204ENST00000474144 LEO1Q8WVC0 666 aaPredicted RBP21.43■■□□□ 1.02
TMEM54-204ENST00000474144 ELSPBP1Q96BH3 223 aa21.43■■□□□ 1.02
TMEM54-204ENST00000474144 ASB16Q96NS5 453 aa21.43■■□□□ 1.02
TMEM54-204ENST00000474144 SEPT5Q99719 369 aaPredicted RBP21.43■■□□□ 1.02
TMEM54-204ENST00000474144 LPIN3Q9BQK8 851 aa21.43■■□□□ 1.02
TMEM54-204ENST00000474144 FOXQ1Q9C009 403 aa21.43■■□□□ 1.02
TMEM54-204ENST00000474144 ITGA11Q9UKX5 1188 aa21.43■■□□□ 1.02
TMEM54-204ENST00000474144 L1RE1Q9UN81 338 aa21.43■■□□□ 1.02
TMEM54-204ENST00000474144 A0A1W2PRU2 124 aa21.42■■□□□ 1.02
TMEM54-204ENST00000474144 KIAA0391O15091 583 aaKnown RBP21.42■■□□□ 1.02
TMEM54-204ENST00000474144 DCNP07585 359 aaKnown RBP21.42■■□□□ 1.02
TMEM54-204ENST00000474144 TMEM191BP0C7N4 346 aa21.42■■□□□ 1.02
TMEM54-204ENST00000474144 SLFN14P0C7P3 912 aa21.42■■□□□ 1.02
TMEM54-204ENST00000474144 PFKFB1P16118 471 aa21.42■■□□□ 1.02
TMEM54-204ENST00000474144 MGAT5BQ3V5L5 792 aa21.42■■□□□ 1.02
TMEM54-204ENST00000474144 SLC44A4Q53GD3 710 aa21.42■■□□□ 1.02
TMEM54-204ENST00000474144 PHLDB3Q6NSJ2 640 aa21.42■■□□□ 1.02
TMEM54-204ENST00000474144 DNAJB7Q7Z6W7 309 aaPredicted RBP21.42■■□□□ 1.02
TMEM54-204ENST00000474144 CCDC105Q8IYK2 499 aa21.42■■□□□ 1.02
TMEM54-204ENST00000474144 CEP57L1Q8IYX8 460 aa21.42■■□□□ 1.02
TMEM54-204ENST00000474144 LEMD2Q8NC56 503 aa21.42■■□□□ 1.02
TMEM54-204ENST00000474144 PAGE5Q96GU1 130 aa21.42■■□□□ 1.02
TMEM54-204ENST00000474144 TMLHEQ9NVH6 421 aa21.42■■□□□ 1.02
TMEM54-204ENST00000474144 INTS13Q9NVM9 706 aa21.42■■□□□ 1.02
TMEM54-204ENST00000474144 NCANO14594 1321 aa21.41■■□□□ 1.02
TMEM54-204ENST00000474144 UBE4BO95155 1302 aa21.41■■□□□ 1.02
TMEM54-204ENST00000474144 PVALEFA0A1B0GWK0 134 aa21.41■■□□□ 1.02
TMEM54-204ENST00000474144 HCRTO43612 131 aa21.41■■□□□ 1.02
TMEM54-204ENST00000474144 KLRC4O43908 158 aa21.41■■□□□ 1.02
TMEM54-204ENST00000474144 LRRN2O75325 713 aa21.41■■□□□ 1.02
TMEM54-204ENST00000474144 ATF6P18850 670 aa21.41■■□□□ 1.02
TMEM54-204ENST00000474144 VIPR2P41587 438 aa21.41■■□□□ 1.02
TMEM54-204ENST00000474144 CYP2J2P51589 502 aa21.41■■□□□ 1.02
TMEM54-204ENST00000474144 STARD6P59095 220 aa21.41■■□□□ 1.02
TMEM54-204ENST00000474144 RBP5P82980 135 aa21.41■■□□□ 1.02
TMEM54-204ENST00000474144 STXBP5Q5T5C0 1151 aa21.41■■□□□ 1.02
TMEM54-204ENST00000474144 LRRC52Q8N7C0 313 aa21.41■■□□□ 1.02
TMEM54-204ENST00000474144 DTWD2Q8NBA8 298 aa21.41■■□□□ 1.02
TMEM54-204ENST00000474144 ANKRD36BP1Q96IX9 119 aa21.41■■□□□ 1.02
TMEM54-204ENST00000474144 SPATA32Q96LK8 384 aa21.41■■□□□ 1.02
TMEM54-204ENST00000474144 ZFP14Q9HCL3 533 aa21.41■■□□□ 1.02
TMEM54-204ENST00000474144 SNX9Q9Y5X1 595 aa21.41■■□□□ 1.02
TMEM54-204ENST00000474144 CMA1P23946 247 aa21.4■■□□□ 1.02
TMEM54-204ENST00000474144 ACAT1P24752 427 aaKnown RBP21.4■■□□□ 1.02
TMEM54-204ENST00000474144 KRT85P78386 507 aa21.4■■□□□ 1.02
TMEM54-204ENST00000474144 MLF2Q15773 248 aaPredicted RBP21.4■■□□□ 1.02
TMEM54-204ENST00000474144 SNRNP35Q16560 246 aaKnown RBP21.4■■□□□ 1.02
TMEM54-204ENST00000474144 VITQ6UXI7 678 aa21.4■■□□□ 1.02
TMEM54-204ENST00000474144 OSTM1Q86WC4 334 aa21.4■■□□□ 1.02
TMEM54-204ENST00000474144 GPIHBP1Q8IV16 184 aa21.4■■□□□ 1.02
TMEM54-204ENST00000474144 ZSCAN18Q8TBC5 510 aaPredicted RBP21.4■■□□□ 1.02
TMEM54-204ENST00000474144 GIPC2Q8TF65 315 aa21.4■■□□□ 1.02
TMEM54-204ENST00000474144 SMARCD2Q92925 531 aa21.4■■□□□ 1.02
TMEM54-204ENST00000474144 PSMG2Q969U7 264 aa21.4■■□□□ 1.02
TMEM54-204ENST00000474144 DDX43Q9NXZ2 648 aaKnown RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms