RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 SLC30A5Q8TAD4 765 aa20.74■□□□□ 0.91
CHMP2B-204ENST00000472024 ZNF830Q96NB3 372 aaPredicted RBP20.74■□□□□ 0.91
CHMP2B-204ENST00000472024 MMS19Q96T76 1030 aa20.74■□□□□ 0.91
CHMP2B-204ENST00000472024 ELOVL4Q9GZR5 314 aa20.74■□□□□ 0.91
CHMP2B-204ENST00000472024 KCND1Q9NSA2 647 aa20.74■□□□□ 0.91
CHMP2B-204ENST00000472024 NME7Q9Y5B8 376 aa20.74■□□□□ 0.91
CHMP2B-204ENST00000472024 ATP8B3O60423 1300 aa20.74■□□□□ 0.91
CHMP2B-204ENST00000472024 EIF3CLB5ME19 914 aaKnown RBP20.73■□□□□ 0.91
CHMP2B-204ENST00000472024 SYN3O14994 580 aa20.73■□□□□ 0.91
CHMP2B-204ENST00000472024 TRAPPC3O43617 180 aa20.73■□□□□ 0.91
CHMP2B-204ENST00000472024 LINC00271P0C7V0 271 aa20.73■□□□□ 0.91
CHMP2B-204ENST00000472024 ODC1P11926 461 aa20.73■□□□□ 0.91
CHMP2B-204ENST00000472024 CHRNB2P17787 502 aa20.73■□□□□ 0.91
CHMP2B-204ENST00000472024 CD58P19256 250 aa20.73■□□□□ 0.91
CHMP2B-204ENST00000472024 EIF4A3P38919 411 aaKnown RBP20.73■□□□□ 0.91
CHMP2B-204ENST00000472024 OR1G1P47890 313 aa20.73■□□□□ 0.91
CHMP2B-204ENST00000472024 LHX1P48742 406 aa20.73■□□□□ 0.91
CHMP2B-204ENST00000472024 PDE6CP51160 858 aa20.73■□□□□ 0.91
CHMP2B-204ENST00000472024 NDST1P52848 882 aa20.73■□□□□ 0.91
CHMP2B-204ENST00000472024 BCAR1P56945 870 aa20.73■□□□□ 0.91
CHMP2B-204ENST00000472024 CDR2Q01850 454 aa20.73■□□□□ 0.91
CHMP2B-204ENST00000472024 HERC6Q8IVU3 1022 aa20.73■□□□□ 0.91
CHMP2B-204ENST00000472024 RNF168Q8IYW5 571 aaPredicted RBP20.73■□□□□ 0.91
CHMP2B-204ENST00000472024 ADGRF2Q8IZF7 708 aa20.73■□□□□ 0.91
CHMP2B-204ENST00000472024 TMEM176AQ96HP8 235 aa20.73■□□□□ 0.91
CHMP2B-204ENST00000472024 TWNKQ96RR1 684 aa20.73■□□□□ 0.91
CHMP2B-204ENST00000472024 EIF3CQ99613 913 aaKnown RBP20.73■□□□□ 0.91
CHMP2B-204ENST00000472024 NT5C1AQ9BXI3 368 aa20.73■□□□□ 0.91
CHMP2B-204ENST00000472024 HCSTQ9UBK5 93 aa20.73■□□□□ 0.91
CHMP2B-204ENST00000472024 ADAM28Q9UKQ2 775 aa20.73■□□□□ 0.91
CHMP2B-204ENST00000472024 STXBP5LQ9Y2K9 1186 aa20.73■□□□□ 0.91
CHMP2B-204ENST00000472024 ZKSCAN5Q9Y2L8 839 aa20.73■□□□□ 0.91
CHMP2B-204ENST00000472024 FAN1Q9Y2M0 1017 aa20.73■□□□□ 0.91
CHMP2B-204ENST00000472024 EPN1Q9Y6I3 576 aaPredicted RBP20.73■□□□□ 0.91
CHMP2B-204ENST00000472024 SLC4A7Q9Y6M7 1214 aa20.73■□□□□ 0.91
CHMP2B-204ENST00000472024 ZBBXA8MT70 800 aa20.72■□□□□ 0.91
CHMP2B-204ENST00000472024 F8W810 466 aa20.72■□□□□ 0.91
CHMP2B-204ENST00000472024 NDUFA10O95299 355 aa20.72■□□□□ 0.91
CHMP2B-204ENST00000472024 LAG3P18627 525 aa20.72■□□□□ 0.91
CHMP2B-204ENST00000472024 CYLC1P35663 651 aaPredicted RBP20.72■□□□□ 0.91
CHMP2B-204ENST00000472024 MAGEA10P43363 369 aaPredicted RBP20.72■□□□□ 0.91
CHMP2B-204ENST00000472024 ARID5AQ03989 594 aa20.72■□□□□ 0.91
CHMP2B-204ENST00000472024 ELAVL2Q12926 359 aaKnown RBP20.72■□□□□ 0.91
CHMP2B-204ENST00000472024 SLC18A3Q16572 532 aa20.72■□□□□ 0.91
CHMP2B-204ENST00000472024 TDRD12Q587J7 1177 aaKnown RBP20.72■□□□□ 0.91
CHMP2B-204ENST00000472024 WSCD1Q658N2 575 aa20.72■□□□□ 0.91
CHMP2B-204ENST00000472024 DSTYKQ6XUX3 929 aa20.72■□□□□ 0.91
CHMP2B-204ENST00000472024 OSTM1Q86WC4 334 aa20.72■□□□□ 0.91
CHMP2B-204ENST00000472024 CLP1Q92989 425 aaKnown RBP20.72■□□□□ 0.91
CHMP2B-204ENST00000472024 CCDC42Q96M95 316 aa20.72■□□□□ 0.91
CHMP2B-204ENST00000472024 AGPAT1Q99943 283 aa20.72■□□□□ 0.91
CHMP2B-204ENST00000472024 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.72■□□□□ 0.91
CHMP2B-204ENST00000472024 HMGXB4Q9UGU5 601 aa20.72■□□□□ 0.91
CHMP2B-204ENST00000472024 PCDHGC3Q9UN70 934 aa20.72■□□□□ 0.91
CHMP2B-204ENST00000472024 INSL6Q9Y581 213 aa20.72■□□□□ 0.91
CHMP2B-204ENST00000472024 CLSTN1O94985 981 aa20.71■□□□□ 0.91
CHMP2B-204ENST00000472024 GNA15P30679 374 aa20.71■□□□□ 0.91
CHMP2B-204ENST00000472024 USP8P40818 1118 aa20.71■□□□□ 0.91
CHMP2B-204ENST00000472024 BRCC3P46736 316 aa20.71■□□□□ 0.91
CHMP2B-204ENST00000472024 KIF11P52732 1056 aa20.71■□□□□ 0.91
CHMP2B-204ENST00000472024 FMO1Q01740 532 aa20.71■□□□□ 0.91
CHMP2B-204ENST00000472024 BTG3Q14201 252 aaPredicted RBP20.71■□□□□ 0.91
CHMP2B-204ENST00000472024 PAN2Q504Q3 1202 aaKnown RBP20.71■□□□□ 0.91
CHMP2B-204ENST00000472024 TMCO2Q7Z6W1 182 aaPredicted RBP20.71■□□□□ 0.91
CHMP2B-204ENST00000472024 VPS36Q86VN1 386 aa20.71■□□□□ 0.91
CHMP2B-204ENST00000472024 RABGGTAQ92696 567 aa20.71■□□□□ 0.91
CHMP2B-204ENST00000472024 YME1L1Q96TA2 773 aa20.71■□□□□ 0.91
CHMP2B-204ENST00000472024 RAD9AQ99638 391 aa20.71■□□□□ 0.91
CHMP2B-204ENST00000472024 PRG3Q9Y2Y8 225 aaPredicted RBP20.71■□□□□ 0.91
CHMP2B-204ENST00000472024 MRPL42Q9Y6G3 142 aaKnown RBP20.71■□□□□ 0.91
CHMP2B-204ENST00000472024 DDX3XO00571 662 aaKnown RBP eCLIP20.7■□□□□ 0.94e-9■■□□□ 12.1
CHMP2B-204ENST00000472024 OAZ2O95190 189 aa20.7■□□□□ 0.9
CHMP2B-204ENST00000472024 VDRP11473 427 aa20.7■□□□□ 0.9
CHMP2B-204ENST00000472024 ATP2A2P16615 1042 aaKnown RBP20.7■□□□□ 0.9
CHMP2B-204ENST00000472024 FGFR3P22607 806 aa20.7■□□□□ 0.9
CHMP2B-204ENST00000472024 GNL1P36915 607 aaPredicted RBP20.7■□□□□ 0.9
CHMP2B-204ENST00000472024 MRPL58Q14197 206 aaKnown RBP20.7■□□□□ 0.9
CHMP2B-204ENST00000472024 MTF1Q14872 753 aa20.7■□□□□ 0.9
CHMP2B-204ENST00000472024 STILQ15468 1287 aa20.7■□□□□ 0.9
CHMP2B-204ENST00000472024 ARHGAP17Q68EM7 881 aa20.7■□□□□ 0.9
CHMP2B-204ENST00000472024 KCNT2Q6UVM3 1135 aa20.7■□□□□ 0.9
CHMP2B-204ENST00000472024 TRIM72Q6ZMU5 477 aa20.7■□□□□ 0.9
CHMP2B-204ENST00000472024 SLC39A11Q8N1S5 342 aa20.7■□□□□ 0.9
CHMP2B-204ENST00000472024 LNX1Q8TBB1 728 aaPredicted RBP20.7■□□□□ 0.9
CHMP2B-204ENST00000472024 SLC20A1Q8WUM9 679 aa20.7■□□□□ 0.9
CHMP2B-204ENST00000472024 ZNF606Q8WXB4 792 aa20.7■□□□□ 0.9
CHMP2B-204ENST00000472024 IGSF21Q96ID5 467 aa20.7■□□□□ 0.9
CHMP2B-204ENST00000472024 GDF15Q99988 308 aa20.7■□□□□ 0.9
CHMP2B-204ENST00000472024 RTP3Q9BQQ7 232 aa20.7■□□□□ 0.9
CHMP2B-204ENST00000472024 ZSWIM1Q9BR11 485 aa20.7■□□□□ 0.9
CHMP2B-204ENST00000472024 DNAI2Q9GZS0 605 aa20.7■□□□□ 0.9
CHMP2B-204ENST00000472024 ACP6Q9NPH0 428 aa20.7■□□□□ 0.9
CHMP2B-204ENST00000472024 PYCARDQ9ULZ3 195 aa20.7■□□□□ 0.9
CHMP2B-204ENST00000472024 SF3B1O75533 1304 aaKnown RBP eCLIP20.7■□□□□ 0.9
CHMP2B-204ENST00000472024 A0A087X0T9 212 aa20.69■□□□□ 0.9
CHMP2B-204ENST00000472024 ZNF263O14978 683 aa20.69■□□□□ 0.9
CHMP2B-204ENST00000472024 TADA2AO75478 443 aa20.69■□□□□ 0.9
CHMP2B-204ENST00000472024 FAM228BP0C875 321 aa20.69■□□□□ 0.9
CHMP2B-204ENST00000472024 GZMAP12544 262 aa20.69■□□□□ 0.9
CHMP2B-204ENST00000472024 CDH5P33151 784 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms