RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 SMG9Q9H0W8 520 aaKnown RBP20.71■□□□□ 0.91
SORT1-203ENST00000471996 BHMT2Q9H2M3 363 aa20.71■□□□□ 0.91
SORT1-203ENST00000471996 EBF1Q9UH73 591 aa20.71■□□□□ 0.91
SORT1-203ENST00000471996 ANKRD11Q6UB99 2663 aaPredicted RBP20.71■□□□□ 0.91
SORT1-203ENST00000471996 OTOL1A6NHN0 477 aaPredicted RBP20.7■□□□□ 0.9
SORT1-203ENST00000471996 CDX4O14627 284 aaPredicted RBP20.7■□□□□ 0.9
SORT1-203ENST00000471996 KHNYNO15037 678 aaKnown RBP20.7■□□□□ 0.9
SORT1-203ENST00000471996 SOAT2O75908 522 aa20.7■□□□□ 0.9
SORT1-203ENST00000471996 FDPSP14324 419 aaKnown RBP20.7■□□□□ 0.9
SORT1-203ENST00000471996 DRD1P21728 446 aa20.7■□□□□ 0.9
SORT1-203ENST00000471996 MUTP22033 750 aa20.7■□□□□ 0.9
SORT1-203ENST00000471996 AARSP49588 968 aaKnown RBP eCLIP20.7■□□□□ 0.9
SORT1-203ENST00000471996 PEX3P56589 373 aa20.7■□□□□ 0.9
SORT1-203ENST00000471996 CYP4F8P98187 520 aa20.7■□□□□ 0.9
SORT1-203ENST00000471996 AMPD2Q01433 879 aa20.7■□□□□ 0.9
SORT1-203ENST00000471996 MYBPC2Q14324 1141 aa20.7■□□□□ 0.9
SORT1-203ENST00000471996 TMEM130Q8N3G9 435 aa20.7■□□□□ 0.9
SORT1-203ENST00000471996 TTC9BQ8N6N2 239 aa20.7■□□□□ 0.9
SORT1-203ENST00000471996 SLC46A2Q9BY10 475 aa20.7■□□□□ 0.9
SORT1-203ENST00000471996 EBF3Q9H4W6 596 aa20.7■□□□□ 0.9
SORT1-203ENST00000471996 FBRSL1Q9HCM7 1045 aaKnown RBP20.7■□□□□ 0.9
SORT1-203ENST00000471996 ARHGAP28Q9P2N2 729 aa20.7■□□□□ 0.9
SORT1-203ENST00000471996 HSFX1Q9UBD0 423 aa20.7■□□□□ 0.9
SORT1-203ENST00000471996 PKD1L2Q7Z442 2459 aa20.69■□□□□ 0.9
SORT1-203ENST00000471996 EPB41L2O43491 1005 aaKnown RBP20.69■□□□□ 0.9
SORT1-203ENST00000471996 APBB3O95704 486 aa20.69■□□□□ 0.9
SORT1-203ENST00000471996 HARSP12081 509 aaKnown RBP20.69■□□□□ 0.9
SORT1-203ENST00000471996 CDC25CP30307 473 aa20.69■□□□□ 0.9
SORT1-203ENST00000471996 LRPAP1P30533 357 aa20.69■□□□□ 0.9
SORT1-203ENST00000471996 MCM7P33993 719 aa20.69■□□□□ 0.9
SORT1-203ENST00000471996 FBXO43Q4G163 708 aa20.69■□□□□ 0.9
SORT1-203ENST00000471996 SYT13Q7L8C5 426 aa20.69■□□□□ 0.9
SORT1-203ENST00000471996 DIS3L2Q8IYB7 885 aaKnown RBP20.69■□□□□ 0.9
SORT1-203ENST00000471996 IL21Q9HBE4 155 aa20.69■□□□□ 0.9
SORT1-203ENST00000471996 GBP1P32455 592 aa20.68■□□□□ 0.9
SORT1-203ENST00000471996 GALK1P51570 392 aa20.68■□□□□ 0.9
SORT1-203ENST00000471996 ECM1Q16610 540 aa20.68■□□□□ 0.9
SORT1-203ENST00000471996 PMS2CLQ68D20 193 aa20.68■□□□□ 0.9
SORT1-203ENST00000471996 TRIM68Q6AZZ1 485 aa20.68■□□□□ 0.9
SORT1-203ENST00000471996 CMTM8Q8IZV2 173 aa20.68■□□□□ 0.9
SORT1-203ENST00000471996 RPLP0P6Q8NHW5 317 aa20.68■□□□□ 0.9
SORT1-203ENST00000471996 ZBTB45Q96K62 511 aaPredicted RBP20.68■□□□□ 0.9
SORT1-203ENST00000471996 GCNAQ96QF7 691 aa20.68■□□□□ 0.9
SORT1-203ENST00000471996 LPIN3Q9BQK8 851 aa20.68■□□□□ 0.9
SORT1-203ENST00000471996 ZMYM5Q9UJ78 669 aa20.68■□□□□ 0.9
SORT1-203ENST00000471996 RBM19Q9Y4C8 960 aaKnown RBP20.68■□□□□ 0.9
SORT1-203ENST00000471996 NEUROG3Q9Y4Z2 214 aa20.68■□□□□ 0.9
SORT1-203ENST00000471996 NUP210Q8TEM1 1887 aaPredicted RBP20.68■□□□□ 0.9
SORT1-203ENST00000471996 LARGE1O95461 756 aa20.67■□□□□ 0.9
SORT1-203ENST00000471996 TYMPP19971 482 aa20.67■□□□□ 0.9
SORT1-203ENST00000471996 DMP1Q13316 513 aaPredicted RBP20.67■□□□□ 0.9
SORT1-203ENST00000471996 DMC1Q14565 340 aa20.67■□□□□ 0.9
SORT1-203ENST00000471996 SEZ6Q53EL9 994 aa20.67■□□□□ 0.9
SORT1-203ENST00000471996 HAUS3Q68CZ6 603 aa20.67■□□□□ 0.9
SORT1-203ENST00000471996 OVOS1Q6IE37 1185 aa20.67■□□□□ 0.9
SORT1-203ENST00000471996 ARMCX5Q6P1M9 558 aa20.67■□□□□ 0.9
SORT1-203ENST00000471996 DSTYKQ6XUX3 929 aa20.67■□□□□ 0.9
SORT1-203ENST00000471996 CENPQQ7L2Z9 268 aaPredicted RBP20.67■□□□□ 0.9
SORT1-203ENST00000471996 C11orf74Q86VG3 221 aa20.67■□□□□ 0.9
SORT1-203ENST00000471996 DAW1Q8N136 415 aa20.67■□□□□ 0.9
SORT1-203ENST00000471996 P2RY13Q9BPV8 354 aa20.67■□□□□ 0.9
SORT1-203ENST00000471996 KMT5AQ9NQR1 393 aa20.67■□□□□ 0.9
SORT1-203ENST00000471996 EML5Q05BV3 1969 aa20.66■□□□□ 0.9
SORT1-203ENST00000471996 TAF4O00268 1085 aa20.66■□□□□ 0.9
SORT1-203ENST00000471996 CYP3A5P20815 502 aa20.66■□□□□ 0.9
SORT1-203ENST00000471996 TUFMP49411 452 aaKnown RBP20.66■□□□□ 0.9
SORT1-203ENST00000471996 NOLC1Q14978 699 aaKnown RBP eCLIP20.66■□□□□ 0.91e-8■□□□□ 8.1
SORT1-203ENST00000471996 VEPH1Q14D04 833 aa20.66■□□□□ 0.9
SORT1-203ENST00000471996 KIAA1211LQ6NV74 962 aa20.66■□□□□ 0.9
SORT1-203ENST00000471996 DEFB124Q8NES8 71 aa20.66■□□□□ 0.9
SORT1-203ENST00000471996 PLEKHA5Q9HAU0 1116 aa20.66■□□□□ 0.9
SORT1-203ENST00000471996 CCL26Q9Y258 94 aa20.66■□□□□ 0.9
SORT1-203ENST00000471996 MSRB2Q9Y3D2 182 aa20.66■□□□□ 0.9
SORT1-203ENST00000471996 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.66■□□□□ 0.9
SORT1-203ENST00000471996 PATE3B3GLJ2 98 aa20.65■□□□□ 0.9
SORT1-203ENST00000471996 HYAL3O43820 417 aaPredicted RBP20.65■□□□□ 0.9
SORT1-203ENST00000471996 TOM1L1O75674 476 aa20.65■□□□□ 0.9
SORT1-203ENST00000471996 OR52Z1P0C646 297 aa20.65■□□□□ 0.9
SORT1-203ENST00000471996 ARSAP15289 507 aa20.65■□□□□ 0.9
SORT1-203ENST00000471996 CCT6AP40227 531 aaKnown RBP20.65■□□□□ 0.9
SORT1-203ENST00000471996 DGKEP52429 567 aa20.65■□□□□ 0.9
SORT1-203ENST00000471996 IRX4P78413 519 aa20.65■□□□□ 0.9
SORT1-203ENST00000471996 SPAG1Q07617 926 aa20.65■□□□□ 0.9
SORT1-203ENST00000471996 ZBTB6Q15916 424 aa20.65■□□□□ 0.9
SORT1-203ENST00000471996 UAP1L1Q3KQV9 507 aa20.65■□□□□ 0.9
SORT1-203ENST00000471996 USP13Q92995 863 aaPredicted RBP20.65■□□□□ 0.9
SORT1-203ENST00000471996 EXOC4Q96A65 974 aa20.65■□□□□ 0.9
SORT1-203ENST00000471996 ACDQ96AP0 544 aa20.65■□□□□ 0.9
SORT1-203ENST00000471996 SEPT5Q99719 369 aaPredicted RBP20.65■□□□□ 0.9
SORT1-203ENST00000471996 ANKFY1Q9P2R3 1169 aa20.65■□□□□ 0.9
SORT1-203ENST00000471996 TBX20Q9UMR3 447 aa20.65■□□□□ 0.9
SORT1-203ENST00000471996 KIAA1024Q9UPX6 916 aa20.65■□□□□ 0.9
SORT1-203ENST00000471996 INVSQ9Y283 1065 aa20.65■□□□□ 0.9
SORT1-203ENST00000471996 HIP1RO75146 1068 aa20.64■□□□□ 0.89
SORT1-203ENST00000471996 CXCL8P10145 99 aa20.64■□□□□ 0.89
SORT1-203ENST00000471996 ATF6P18850 670 aa20.64■□□□□ 0.89
SORT1-203ENST00000471996 U2AF2P26368 475 aaKnown RBP eCLIP20.64■□□□□ 0.89
SORT1-203ENST00000471996 AVPR1AP37288 418 aa20.64■□□□□ 0.89
SORT1-203ENST00000471996 BFSP1Q12934 665 aa20.64■□□□□ 0.89
SORT1-203ENST00000471996 MGAT5BQ3V5L5 792 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms