RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 PNPLA4P41247 253 aa12.43□□□□□ -0.42
COL4A3-205ENST00000471862 TFAMQ00059 246 aaKnown RBP12.43□□□□□ -0.42
COL4A3-205ENST00000471862 PLD1Q13393 1074 aa12.43□□□□□ -0.42
COL4A3-205ENST00000471862 FAM78AQ5JUQ0 283 aa12.43□□□□□ -0.42
COL4A3-205ENST00000471862 FAM26FQ5R3K3 315 aa12.43□□□□□ -0.42
COL4A3-205ENST00000471862 WSCD1Q658N2 575 aa12.43□□□□□ -0.42
COL4A3-205ENST00000471862 STXBP4Q6ZWJ1 553 aa12.43□□□□□ -0.42
COL4A3-205ENST00000471862 LRRTM3Q86VH5 581 aa12.43□□□□□ -0.42
COL4A3-205ENST00000471862 LRRC52Q8N7C0 313 aa12.43□□□□□ -0.42
COL4A3-205ENST00000471862 DTWD2Q8NBA8 298 aa12.43□□□□□ -0.42
COL4A3-205ENST00000471862 SPRYD3Q8NCJ5 442 aa12.43□□□□□ -0.42
COL4A3-205ENST00000471862 FAM84AQ96KN4 292 aa12.43□□□□□ -0.42
COL4A3-205ENST00000471862 TRPV4Q9HBA0 871 aa12.43□□□□□ -0.42
COL4A3-205ENST00000471862 PDE11AQ9HCR9 933 aa12.43□□□□□ -0.42
COL4A3-205ENST00000471862 ASAH2Q9NR71 780 aa12.43□□□□□ -0.42
COL4A3-205ENST00000471862 SIX4Q9UIU6 781 aa12.43□□□□□ -0.42
COL4A3-205ENST00000471862 ITGA11Q9UKX5 1188 aa12.43□□□□□ -0.42
COL4A3-205ENST00000471862 CFAP45Q9UL16 551 aa12.43□□□□□ -0.42
COL4A3-205ENST00000471862 SLC27A5Q9Y2P5 690 aa12.43□□□□□ -0.42
COL4A3-205ENST00000471862 ZDHHC9Q9Y397 364 aa12.43□□□□□ -0.42
COL4A3-205ENST00000471862 ASB3Q9Y575 518 aa12.43□□□□□ -0.42
COL4A3-205ENST00000471862 NCANO14594 1321 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 UBE4BO95155 1302 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 PTPRJQ12913 1337 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 PATJQ8NI35 1801 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 PROB1E7EW31 1015 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 SOAT2O75908 522 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 MYL4P12829 197 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 GJA1P17302 382 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 ME1P48163 572 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 EPHB3P54753 998 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 PFKPQ01813 784 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 PRKCQQ04759 706 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 SMARCB1Q12824 385 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 MLF2Q15773 248 aaPredicted RBP12.42□□□□□ -0.42
COL4A3-205ENST00000471862 SLC39A12Q504Y0 691 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 SLC44A4Q53GD3 710 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 METTL23Q86XA0 190 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 CBWD2Q8IUF1 395 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 PJA1Q8NG27 643 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 CACTINQ8WUQ7 758 aaKnown RBP12.42□□□□□ -0.42
COL4A3-205ENST00000471862 SCFD1Q8WVM8 642 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 ATOH1Q92858 354 aaPredicted RBP12.42□□□□□ -0.42
COL4A3-205ENST00000471862 PSMG2Q969U7 264 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 ZSWIM3Q96MP5 696 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 MTMR12Q9C0I1 747 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 BLZF1Q9H2G9 400 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 ZNF334Q9HCZ1 680 aaPredicted RBP12.42□□□□□ -0.42
COL4A3-205ENST00000471862 GDAP2Q9NXN4 497 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 FAM13BQ9NYF5 915 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 HSPBP1Q9NZL4 362 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 L1RE1Q9UN81 338 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 AGAP1Q9UPQ3 857 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 F5P12259 2224 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 CACNA1IQ9P0X4 2223 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 OBSL1O75147 1896 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 FANCMQ8IYD8 2048 aa12.42□□□□□ -0.42
COL4A3-205ENST00000471862 TICRRQ7Z2Z1 1910 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 PVALEFA0A1B0GWK0 134 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 ZNF233A6NK53 670 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 SHISA7A6NL88 538 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 ACTN4O43707 911 aaKnown RBP12.41□□□□□ -0.42
COL4A3-205ENST00000471862 KLRC4O43908 158 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 GLULP15104 373 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 ATF6P18850 670 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 NBL1P41271 181 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 ALDH1A3P47895 512 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 SNW1Q13573 536 aaKnown RBP12.41□□□□□ -0.42
COL4A3-205ENST00000471862 CUL4BQ13620 913 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 TEAD2Q15562 447 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 BMT2Q1RMZ1 405 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 LMBRD2Q68DH5 695 aaPredicted RBP12.41□□□□□ -0.42
COL4A3-205ENST00000471862 VITQ6UXI7 678 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 GAREM2Q75VX8 874 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 LIMS2Q7Z4I7 341 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 DNAJB7Q7Z6W7 309 aaPredicted RBP12.41□□□□□ -0.42
COL4A3-205ENST00000471862 THEM5Q8N1Q8 247 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 PDCL2Q8N4E4 241 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 OR5B17Q8NGF7 314 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 SPPL2BQ8TCT7 592 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 C2orf15Q8WU43 125 aaKnown RBP12.41□□□□□ -0.42
COL4A3-205ENST00000471862 SMARCD2Q92925 531 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 SHDQ96IW2 340 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 MKNK1Q9BUB5 465 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 FOXQ1Q9C009 403 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 KIAA1586Q9HCI6 787 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 ZFP14Q9HCL3 533 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 AGPAT3Q9NRZ7 376 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 TMLHEQ9NVH6 421 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 INTS13Q9NVM9 706 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 SERTAD1Q9UHV2 236 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 SIT1Q9Y3P8 196 aa12.41□□□□□ -0.42
COL4A3-205ENST00000471862 KIF26AQ9ULI4 1882 aaPredicted RBP12.4□□□□□ -0.42
COL4A3-205ENST00000471862 VPS13AQ96RL7 3174 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 A0A1W2PRU2 124 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 KANSL1LA0AUZ9 987 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 STK25O00506 426 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 LRRN2O75325 713 aa12.4□□□□□ -0.42
COL4A3-205ENST00000471862 DCNP07585 359 aaKnown RBP12.4□□□□□ -0.42
COL4A3-205ENST00000471862 TMEM191BP0C7N4 346 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms