RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 MSLNQ13421 630 aaPredicted RBP11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 C12orf60Q5U649 245 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 FAAH2Q6GMR7 532 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 ANKRD35Q8N283 1001 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 MARVELD2Q8N4S9 558 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 METTL25Q8N6Q8 603 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 DDI1Q8WTU0 396 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 MRIQ9BWK5 157 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 UBN1Q9NPG3 1134 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 TAS2R1Q9NYW7 299 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 SELENONQ9NZV5 590 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 NENFQ9UMX5 172 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 HAUS5O94927 633 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 NPR1P16066 1061 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 AMPD1P23109 780 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 PPARGP37231 505 aaPredicted RBP11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 COG7P83436 770 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 FUT2Q10981 343 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 TROAPQ12815 778 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 FYB2Q5VWT5 728 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 MTDHQ86UE4 582 aaKnown RBP11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 LRRC6Q86X45 466 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 ENAHQ8N8S7 591 aaPredicted RBP11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 MIGA1Q8NAN2 632 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 UHMK1Q8TAS1 419 aaKnown RBP11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 PRPF31Q8WWY3 499 aaKnown RBP11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 SGF29Q96ES7 293 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 ANKRD36BP1Q96IX9 119 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 NSMCE3Q96MG7 304 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 LRRC27Q9C0I9 530 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 RETREG1Q9H6L5 497 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 GPRC5DQ9NZD1 345 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 ADAMTS1Q9UHI8 967 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 PADI4Q9UM07 663 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 RABL2BQ9UNT1 228 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 NR2E1Q9Y466 385 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 SNX9Q9Y5X1 595 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 AK5Q9Y6K8 562 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 C15orf38-AP3S2A0A0A6YYH1 394 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 MINDY4BA8MYZ0 360 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 PGM3O95394 542 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 KLHL30Q0D2K2 578 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 DNAJC3Q13217 504 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 MYLK3Q32MK0 819 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 ARL13BQ3SXY8 428 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 ARPINQ7Z6K5 226 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 ZNF410Q86VK4 478 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 SCYL3Q8IZE3 742 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 DAGLBQ8NCG7 672 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 DENND1AQ8TEH3 1009 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 FAM172AQ8WUF8 416 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 SCFD1Q8WVM8 642 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 SEMA6BQ9H3T3 888 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 ZNF408Q9H9D4 720 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 ARL8BQ9NVJ2 186 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 TAF1P21675 1872 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 PLIN4Q96Q06 1357 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 GAKO14976 1311 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 USP17L12C9JPN9 530 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 USP17L21D6R901 530 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 FAM47E-STBD1D6RA91 191 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 PRPF4O43172 522 aaKnown RBP eCLIP11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 PEX1O43933 1283 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 BAIAP3O94812 1187 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 CD48P09326 243 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 POLR2EP19388 210 aaKnown RBP11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 PHKA2P46019 1235 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 RPS3AP61247 264 aaKnown RBP11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 C6orf163Q5TEZ5 329 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 ADGRA1Q86SQ6 560 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 USP33Q8TEY7 942 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 GLG1Q92896 1179 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 OSBPL6Q9BZF3 934 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 UNKQ9C0B0 810 aaKnown RBP11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 COA1Q9GZY4 146 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 CDC42EP4Q9H3Q1 356 aaKnown RBP11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 ZNF696Q9H7X3 374 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 NOX1Q9Y5S8 564 aa11.32□□□□□ -0.6
CHMP2B-203ENST00000471660 BAZ2AQ9UIF9 1905 aaKnown RBP11.31□□□□□ -0.6
CHMP2B-203ENST00000471660 DDX3YO15523 660 aaKnown RBP11.31□□□□□ -0.6
CHMP2B-203ENST00000471660 DENRO43583 198 aaKnown RBP11.31□□□□□ -0.6
CHMP2B-203ENST00000471660 ZBED4O75132 1171 aa11.31□□□□□ -0.6
CHMP2B-203ENST00000471660 CDH16O75309 829 aa11.31□□□□□ -0.6
CHMP2B-203ENST00000471660 CSDE1O75534 798 aaKnown RBP11.31□□□□□ -0.6
CHMP2B-203ENST00000471660 DGKIO75912 1065 aa11.31□□□□□ -0.6
CHMP2B-203ENST00000471660 ENDOUP21128 410 aaKnown RBP11.31□□□□□ -0.6
CHMP2B-203ENST00000471660 PHBP35232 272 aa11.31□□□□□ -0.6
CHMP2B-203ENST00000471660 PGM1P36871 562 aa11.31□□□□□ -0.6
CHMP2B-203ENST00000471660 NOVP48745 357 aa11.31□□□□□ -0.6
CHMP2B-203ENST00000471660 NR1H3Q13133 447 aa11.31□□□□□ -0.6
CHMP2B-203ENST00000471660 SPARCL1Q14515 664 aa11.31□□□□□ -0.6
CHMP2B-203ENST00000471660 ASIC2Q16515 512 aa11.31□□□□□ -0.6
CHMP2B-203ENST00000471660 METTL21CQ5VZV1 264 aa11.31□□□□□ -0.6
CHMP2B-203ENST00000471660 NIPAL1Q6NVV3 410 aa11.31□□□□□ -0.6
CHMP2B-203ENST00000471660 CHRDL2Q6WN34 429 aa11.31□□□□□ -0.6
CHMP2B-203ENST00000471660 DTHD1Q6ZMT9 781 aa11.31□□□□□ -0.6
CHMP2B-203ENST00000471660 RAPH1Q70E73 1250 aa11.31□□□□□ -0.6
CHMP2B-203ENST00000471660 EPM2AIP1Q7L775 607 aaPredicted RBP11.31□□□□□ -0.6
CHMP2B-203ENST00000471660 TTC39CQ8N584 583 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms