RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 CCDC163A0A0D9SF12 145 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 CDX4O14627 284 aaPredicted RBP7.5□□□□□ -1.21
HDAC1-204ENST00000471488 NEMFO60524 1076 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 FGF19O95750 216 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 PSMA5P28066 241 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 NMT1P30419 496 aaKnown RBP7.5□□□□□ -1.21
HDAC1-204ENST00000471488 GRM5P41594 1212 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 NAMPTP43490 491 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 EPHA5P54756 1037 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 NR5A1Q13285 461 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 NPY5RQ15761 445 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 TSGA10IPQ3SY00 556 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 SLC39A12Q504Y0 691 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 SOWAHCQ53LP3 525 aaPredicted RBP7.5□□□□□ -1.21
HDAC1-204ENST00000471488 TMEM196Q5HYL7 178 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 EARS2Q5JPH6 523 aaKnown RBP7.5□□□□□ -1.21
HDAC1-204ENST00000471488 ITIH5Q86UX2 942 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 TMEFF1Q8IYR6 380 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 CCDC33Q8N5R6 958 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 RLN3Q8WXF3 142 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 ACDQ96AP0 544 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 FAM212AQ96EL1 285 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 SUSD3Q96L08 255 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 DRC1Q96MC2 740 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 ACAP3Q96P50 834 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 HSD17B14Q9BPX1 270 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 CCDC113Q9H0I3 377 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 DNAJC25Q9H1X3 360 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 CDT1Q9H211 546 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 CRISPLD1Q9H336 500 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 FBRSL1Q9HCM7 1045 aaKnown RBP7.5□□□□□ -1.21
HDAC1-204ENST00000471488 BRMS1Q9HCU9 246 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 PCDHB8Q9UN66 801 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 WASF3Q9UPY6 502 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 CCL26Q9Y258 94 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 STK24Q9Y6E0 443 aa7.5□□□□□ -1.21
HDAC1-204ENST00000471488 NID2Q14112 1375 aa7.49□□□□□ -1.21
HDAC1-204ENST00000471488 MTMR11A4FU01 709 aa7.49□□□□□ -1.21
HDAC1-204ENST00000471488 OTOL1A6NHN0 477 aaPredicted RBP7.49□□□□□ -1.21
HDAC1-204ENST00000471488 MEFVO15553 781 aaPredicted RBP7.49□□□□□ -1.21
HDAC1-204ENST00000471488 CDC45O75419 566 aa7.49□□□□□ -1.21
HDAC1-204ENST00000471488 MED24O75448 989 aa7.49□□□□□ -1.21
HDAC1-204ENST00000471488 CDKL5O76039 1030 aa7.49□□□□□ -1.21
HDAC1-204ENST00000471488 LYPLA2O95372 231 aa7.49□□□□□ -1.21
HDAC1-204ENST00000471488 ENGP17813 658 aa7.49□□□□□ -1.21
HDAC1-204ENST00000471488 DRD1P21728 446 aa7.49□□□□□ -1.21
HDAC1-204ENST00000471488 CDC25CP30307 473 aa7.49□□□□□ -1.21
HDAC1-204ENST00000471488 RPL9P32969 192 aaKnown RBP7.49□□□□□ -1.21
HDAC1-204ENST00000471488 KRT2P35908 639 aa7.49□□□□□ -1.21
HDAC1-204ENST00000471488 EFNA5P52803 228 aa7.49□□□□□ -1.21
HDAC1-204ENST00000471488 PEX3P56589 373 aa7.49□□□□□ -1.21
HDAC1-204ENST00000471488 SCAPQ12770 1279 aa7.49□□□□□ -1.21
HDAC1-204ENST00000471488 LMAN2Q12907 356 aa7.49□□□□□ -1.21
HDAC1-204ENST00000471488 MRPL58Q14197 206 aaKnown RBP7.49□□□□□ -1.21
HDAC1-204ENST00000471488 PMS2CLQ68D20 193 aa7.49□□□□□ -1.21
HDAC1-204ENST00000471488 OVOS1Q6IE37 1185 aa7.49□□□□□ -1.21
HDAC1-204ENST00000471488 LPCAT2Q7L5N7 544 aa7.49□□□□□ -1.21
HDAC1-204ENST00000471488 CPA6Q8N4T0 437 aa7.49□□□□□ -1.21
HDAC1-204ENST00000471488 PNPLA1Q8N8W4 532 aa7.49□□□□□ -1.21
HDAC1-204ENST00000471488 STKLD1Q8NE28 680 aa7.49□□□□□ -1.21
HDAC1-204ENST00000471488 OR2I1PQ8NGU4 316 aa7.49□□□□□ -1.21
HDAC1-204ENST00000471488 PSMG2Q969U7 264 aa7.49□□□□□ -1.21
HDAC1-204ENST00000471488 ERLEC1Q96DZ1 483 aa7.49□□□□□ -1.21
HDAC1-204ENST00000471488 TARS2Q9BW92 718 aaKnown RBP7.49□□□□□ -1.21
HDAC1-204ENST00000471488 LRRC3Q9BY71 257 aa7.49□□□□□ -1.21
HDAC1-204ENST00000471488 MRPL4Q9BYD3 311 aaKnown RBP7.49□□□□□ -1.21
HDAC1-204ENST00000471488 CCDC86Q9H6F5 360 aaKnown RBP7.49□□□□□ -1.21
HDAC1-204ENST00000471488 TASP1Q9H6P5 420 aa7.49□□□□□ -1.21
HDAC1-204ENST00000471488 HPS4Q9NQG7 708 aa7.49□□□□□ -1.21
HDAC1-204ENST00000471488 PCDHB9Q9Y5E1 797 aa7.49□□□□□ -1.21
HDAC1-204ENST00000471488 DSPP15924 2871 aaKnown RBP7.49□□□□□ -1.21
HDAC1-204ENST00000471488 TRIP11Q15643 1979 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 TRDMT1O14717 391 aaKnown RBP7.48□□□□□ -1.21
HDAC1-204ENST00000471488 VNN2O95498 520 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 CYP11B2P19099 503 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 MCM7P33993 719 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 IFNAR2P48551 515 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 GUCY2FP51841 1108 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 FAM193AP78312 1265 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 DMP1Q13316 513 aaPredicted RBP7.48□□□□□ -1.21
HDAC1-204ENST00000471488 TOB2Q14106 344 aaPredicted RBP7.48□□□□□ -1.21
HDAC1-204ENST00000471488 NBR1Q14596 966 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 TXNDC8Q6A555 127 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 CENPPQ6IPU0 288 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 SYT13Q7L8C5 426 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 PROSER1Q86XN7 944 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 CATSPER3Q86XQ3 398 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 CMTM8Q8IZV2 173 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 FRMD1Q8N878 549 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 ERMNQ8TAM6 284 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 MDM1Q8TC05 714 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 CD101Q93033 1021 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 BICD1Q96G01 975 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 SPACA7Q96KW9 195 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 ACO2Q99798 780 aaKnown RBP7.48□□□□□ -1.21
HDAC1-204ENST00000471488 SLC46A2Q9BY10 475 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 DUS2Q9NX74 493 aaKnown RBP7.48□□□□□ -1.21
HDAC1-204ENST00000471488 OBP2AQ9NY56 170 aa7.48□□□□□ -1.21
HDAC1-204ENST00000471488 ABI2Q9NYB9 513 aaPredicted RBP7.48□□□□□ -1.21
HDAC1-204ENST00000471488 MBD1Q9UIS9 605 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms