RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 TCEAL4Q96EI5 215 aa12.5□□□□□ -0.41
HLA-C-206ENST00000470363 MCRS1Q96EZ8 462 aa12.5□□□□□ -0.41
HLA-C-206ENST00000470363 SHDQ96IW2 340 aa12.5□□□□□ -0.41
HLA-C-206ENST00000470363 KXD1Q9BQD3 176 aa12.5□□□□□ -0.41
HLA-C-206ENST00000470363 LRRC3Q9BY71 257 aa12.5□□□□□ -0.41
HLA-C-206ENST00000470363 OSBPL6Q9BZF3 934 aa12.5□□□□□ -0.41
HLA-C-206ENST00000470363 MRPL44Q9H9J2 332 aaKnown RBP12.5□□□□□ -0.41
HLA-C-206ENST00000470363 CEP72Q9P209 647 aa12.5□□□□□ -0.41
HLA-C-206ENST00000470363 LARSQ9P2J5 1176 aaKnown RBP12.5□□□□□ -0.41
HLA-C-206ENST00000470363 ANKFY1Q9P2R3 1169 aa12.5□□□□□ -0.41
HLA-C-206ENST00000470363 TBX20Q9UMR3 447 aa12.5□□□□□ -0.41
HLA-C-206ENST00000470363 PCDHB8Q9UN66 801 aa12.5□□□□□ -0.41
HLA-C-206ENST00000470363 CTNND2Q9UQB3 1225 aa12.5□□□□□ -0.41
HLA-C-206ENST00000470363 MRPS23Q9Y3D9 190 aaKnown RBP12.5□□□□□ -0.41
HLA-C-206ENST00000470363 INSL5Q9Y5Q6 135 aa12.5□□□□□ -0.41
HLA-C-206ENST00000470363 COL4A3Q01955 1670 aa12.5□□□□□ -0.41
HLA-C-206ENST00000470363 A0A0B4J269 797 aa12.49□□□□□ -0.41
HLA-C-206ENST00000470363 SP9P0CG40 484 aa12.49□□□□□ -0.41
HLA-C-206ENST00000470363 HARSP12081 509 aaKnown RBP12.49□□□□□ -0.41
HLA-C-206ENST00000470363 SCP2P22307 547 aa12.49□□□□□ -0.41
HLA-C-206ENST00000470363 GTF2BQ00403 316 aa12.49□□□□□ -0.41
HLA-C-206ENST00000470363 SPAG1Q07617 926 aa12.49□□□□□ -0.41
HLA-C-206ENST00000470363 MLF2Q15773 248 aaPredicted RBP12.49□□□□□ -0.41
HLA-C-206ENST00000470363 CTXN3Q4LDR2 81 aa12.49□□□□□ -0.41
HLA-C-206ENST00000470363 ZC2HC1CQ53FD0 456 aaPredicted RBP12.49□□□□□ -0.41
HLA-C-206ENST00000470363 L1TD1Q5T7N2 865 aaKnown RBP12.49□□□□□ -0.41
HLA-C-206ENST00000470363 RNF19BQ6ZMZ0 732 aa12.49□□□□□ -0.41
HLA-C-206ENST00000470363 LUZP1Q86V48 1076 aa12.49□□□□□ -0.41
HLA-C-206ENST00000470363 DHX40Q8IX18 779 aaKnown RBP12.49□□□□□ -0.41
HLA-C-206ENST00000470363 NELFCDQ8IXH7 590 aa12.49□□□□□ -0.41
HLA-C-206ENST00000470363 AOPEPQ8N6M6 819 aa12.49□□□□□ -0.41
HLA-C-206ENST00000470363 APPL2Q8NEU8 664 aa12.49□□□□□ -0.41
HLA-C-206ENST00000470363 SCFD1Q8WVM8 642 aa12.49□□□□□ -0.41
HLA-C-206ENST00000470363 CLDN23Q96B33 292 aa12.49□□□□□ -0.41
HLA-C-206ENST00000470363 ELSPBP1Q96BH3 223 aa12.49□□□□□ -0.41
HLA-C-206ENST00000470363 ZSWIM3Q96MP5 696 aa12.49□□□□□ -0.41
HLA-C-206ENST00000470363 MED15Q96RN5 788 aa12.49□□□□□ -0.41
HLA-C-206ENST00000470363 IKZF4Q9H2S9 585 aa12.49□□□□□ -0.41
HLA-C-206ENST00000470363 CRISPLD1Q9H336 500 aa12.49□□□□□ -0.41
HLA-C-206ENST00000470363 SEMA4AQ9H3S1 761 aa12.49□□□□□ -0.41
HLA-C-206ENST00000470363 CYP4F11Q9HBI6 524 aa12.49□□□□□ -0.41
HLA-C-206ENST00000470363 AFF4Q9UHB7 1163 aaKnown RBP12.49□□□□□ -0.41
HLA-C-206ENST00000470363 NUB1Q9Y5A7 615 aa12.49□□□□□ -0.41
HLA-C-206ENST00000470363 EP300Q09472 2414 aaPredicted RBP12.49□□□□□ -0.41
HLA-C-206ENST00000470363 CACNA1IQ9P0X4 2223 aa12.49□□□□□ -0.41
HLA-C-206ENST00000470363 TRIM49BA6NDI0 452 aa12.48□□□□□ -0.41
HLA-C-206ENST00000470363 H0YCG3 227 aa12.48□□□□□ -0.41
HLA-C-206ENST00000470363 PRRG1O14668 218 aa12.48□□□□□ -0.41
HLA-C-206ENST00000470363 PPEF2O14830 753 aa12.48□□□□□ -0.41
HLA-C-206ENST00000470363 GCNT3O95395 438 aa12.48□□□□□ -0.41
HLA-C-206ENST00000470363 LRG1P02750 347 aa12.48□□□□□ -0.41
HLA-C-206ENST00000470363 ELF1P32519 619 aa12.48□□□□□ -0.41
HLA-C-206ENST00000470363 ARPP19P56211 112 aa12.48□□□□□ -0.41
HLA-C-206ENST00000470363 PFKPQ01813 784 aa12.48□□□□□ -0.41
HLA-C-206ENST00000470363 ADCY1Q08828 1119 aa12.48□□□□□ -0.41
HLA-C-206ENST00000470363 KCNA1Q09470 495 aa12.48□□□□□ -0.41
HLA-C-206ENST00000470363 IQCB1Q15051 598 aa12.48□□□□□ -0.41
HLA-C-206ENST00000470363 FAM78AQ5JUQ0 283 aa12.48□□□□□ -0.41
HLA-C-206ENST00000470363 SPATA1Q5VX52 437 aa12.48□□□□□ -0.41
HLA-C-206ENST00000470363 ZNF280DQ6N043 979 aa12.48□□□□□ -0.41
HLA-C-206ENST00000470363 ZNF720Q7Z2F6 126 aa12.48□□□□□ -0.41
HLA-C-206ENST00000470363 HS6ST3Q8IZP7 471 aa12.48□□□□□ -0.41
HLA-C-206ENST00000470363 FAM200AQ8TCP9 573 aa12.48□□□□□ -0.41
HLA-C-206ENST00000470363 NELFBQ8WX92 580 aa12.48□□□□□ -0.41
HLA-C-206ENST00000470363 ASB16Q96NS5 453 aa12.48□□□□□ -0.41
HLA-C-206ENST00000470363 TSPAN18Q96SJ8 248 aa12.48□□□□□ -0.41
HLA-C-206ENST00000470363 CORO1BQ9BR76 489 aa12.48□□□□□ -0.41
HLA-C-206ENST00000470363 STRA6Q9BX79 667 aa12.48□□□□□ -0.41
HLA-C-206ENST00000470363 NAT10Q9H0A0 1025 aaKnown RBP12.48□□□□□ -0.41
HLA-C-206ENST00000470363 ST6GALNAC4Q9H4F1 302 aa12.48□□□□□ -0.41
HLA-C-206ENST00000470363 TRPV4Q9HBA0 871 aa12.48□□□□□ -0.41
HLA-C-206ENST00000470363 LTB4R2Q9NPC1 389 aa12.48□□□□□ -0.41
HLA-C-206ENST00000470363 DACH1Q9UI36 760 aa12.48□□□□□ -0.41
HLA-C-206ENST00000470363 CPSF3Q9UKF6 684 aaKnown RBP12.48□□□□□ -0.41
HLA-C-206ENST00000470363 UBQLN1Q9UMX0 589 aaKnown RBP12.48□□□□□ -0.41
HLA-C-206ENST00000470363 TIMM13Q9Y5L4 95 aaPredicted RBP12.48□□□□□ -0.41
HLA-C-206ENST00000470363 STYXL1Q9Y6J8 313 aa12.48□□□□□ -0.41
HLA-C-206ENST00000470363 ANO9A1A5B4 782 aa12.47□□□□□ -0.41
HLA-C-206ENST00000470363 GOLGA6L3A6NEY3 463 aa12.47□□□□□ -0.41
HLA-C-206ENST00000470363 K7ENM7 598 aa12.47□□□□□ -0.41
HLA-C-206ENST00000470363 PIRO00625 290 aa12.47□□□□□ -0.41
HLA-C-206ENST00000470363 SPTLC1O15269 473 aa12.47□□□□□ -0.41
HLA-C-206ENST00000470363 OGTO15294 1046 aa12.47□□□□□ -0.41
HLA-C-206ENST00000470363 CD72P21854 359 aa12.47□□□□□ -0.41
HLA-C-206ENST00000470363 HOXD13P35453 343 aa12.47□□□□□ -0.41
HLA-C-206ENST00000470363 GUCY2FP51841 1108 aa12.47□□□□□ -0.41
HLA-C-206ENST00000470363 PMS1P54277 932 aaKnown RBP12.47□□□□□ -0.41
HLA-C-206ENST00000470363 LILRA4P59901 499 aa12.47□□□□□ -0.41
HLA-C-206ENST00000470363 PAK1Q13153 545 aa12.47□□□□□ -0.41
HLA-C-206ENST00000470363 GPR17Q13304 367 aa12.47□□□□□ -0.41
HLA-C-206ENST00000470363 STIM1Q13586 685 aa12.47□□□□□ -0.41
HLA-C-206ENST00000470363 NCAPHQ15003 741 aa12.47□□□□□ -0.41
HLA-C-206ENST00000470363 KYAT1Q16773 422 aa12.47□□□□□ -0.41
HLA-C-206ENST00000470363 EPM2AIP1Q7L775 607 aaPredicted RBP12.47□□□□□ -0.41
HLA-C-206ENST00000470363 MAP4K3Q8IVH8 894 aa12.47□□□□□ -0.41
HLA-C-206ENST00000470363 GUF1Q8N442 669 aaKnown RBP12.47□□□□□ -0.41
HLA-C-206ENST00000470363 NELL1Q92832 810 aa12.47□□□□□ -0.41
HLA-C-206ENST00000470363 KIF12Q96FN5 646 aa12.47□□□□□ -0.41
HLA-C-206ENST00000470363 OXCT2Q9BYC2 517 aaPredicted RBP12.47□□□□□ -0.41
HLA-C-206ENST00000470363 TRPV5Q9NQA5 729 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms