RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 VARS2Q5ST30 1063 aaKnown RBP18.98■□□□□ 0.63
MRPL28-208ENST00000469744 LIN9Q5TKA1 542 aa18.98■□□□□ 0.63
MRPL28-208ENST00000469744 ANKS3Q6ZW76 656 aa18.98■□□□□ 0.63
MRPL28-208ENST00000469744 CSGALNACT2Q8N6G5 542 aa18.98■□□□□ 0.63
MRPL28-208ENST00000469744 KIF18AQ8NI77 898 aa18.98■□□□□ 0.63
MRPL28-208ENST00000469744 SLC7A14Q8TBB6 771 aa18.98■□□□□ 0.63
MRPL28-208ENST00000469744 FGFBP2Q9BYJ0 223 aa18.98■□□□□ 0.63
MRPL28-208ENST00000469744 ST6GALNAC4Q9H4F1 302 aa18.98■□□□□ 0.63
MRPL28-208ENST00000469744 TAB2Q9NYJ8 693 aa18.98■□□□□ 0.63
MRPL28-208ENST00000469744 SORCS3Q9UPU3 1222 aa18.98■□□□□ 0.63
MRPL28-208ENST00000469744 TRIM49BA6NDI0 452 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 RIOK3O14730 519 aaKnown RBP18.97■□□□□ 0.63
MRPL28-208ENST00000469744 CCL16O15467 120 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 PPP1R37O75864 691 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 GBP2P32456 591 aaPredicted RBP18.97■□□□□ 0.63
MRPL28-208ENST00000469744 CASP5P51878 434 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 ADKP55263 362 aaKnown RBP18.97■□□□□ 0.63
MRPL28-208ENST00000469744 ARPP19P56211 112 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 LRRC63Q05C16 580 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 MTMR3Q13615 1198 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 RAB33AQ14088 237 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 ANKRD40Q6AI12 368 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 JADE1Q6IE81 842 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 PLCD3Q8N3E9 789 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 ZNF507Q8TCN5 953 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 PBXIP1Q96AQ6 731 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 ASIC4Q96FT7 647 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 MYADMQ96S97 322 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 VPS16Q9H269 839 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 CPSF3Q9UKF6 684 aaKnown RBP18.97■□□□□ 0.63
MRPL28-208ENST00000469744 GCNT3O95395 438 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 GAP43P17677 238 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 NTHL1P78549 312 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 ZBTB6Q15916 424 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 KYAT1Q16773 422 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 PPM1LQ5SGD2 360 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 GET4Q7L5D6 327 aaPredicted RBP18.97■□□□□ 0.63
MRPL28-208ENST00000469744 GRASPQ7Z6J2 395 aaPredicted RBP18.97■□□□□ 0.63
MRPL28-208ENST00000469744 REXO1L1PQ8IX06 675 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 CCDC65Q8IXS2 484 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 IQCDQ96DY2 449 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 SUSD3Q96L08 255 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 STRA6Q9BX79 667 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 RHOBTB2Q9BYZ6 727 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 PANK4Q9NVE7 773 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 SEL1LQ9UBV2 794 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 UBQLN1Q9UMX0 589 aaKnown RBP18.97■□□□□ 0.63
MRPL28-208ENST00000469744 POLIQ9UNA4 740 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 BACE2Q9Y5Z0 518 aa18.97■□□□□ 0.63
MRPL28-208ENST00000469744 PPEF2O14830 753 aa18.96■□□□□ 0.63
MRPL28-208ENST00000469744 CTIFO43310 598 aaKnown RBP18.96■□□□□ 0.63
MRPL28-208ENST00000469744 KIF20AO95235 890 aa18.96■□□□□ 0.63
MRPL28-208ENST00000469744 PAPLNO95428 1278 aa18.96■□□□□ 0.63
MRPL28-208ENST00000469744 NFICP08651 508 aa18.96■□□□□ 0.63
MRPL28-208ENST00000469744 ABCD1P33897 745 aa18.96■□□□□ 0.63
MRPL28-208ENST00000469744 ROR1Q01973 937 aa18.96■□□□□ 0.63
MRPL28-208ENST00000469744 SYCP1Q15431 976 aa18.96■□□□□ 0.63
MRPL28-208ENST00000469744 CYP26C1Q6V0L0 522 aa18.96■□□□□ 0.63
MRPL28-208ENST00000469744 ST13P5Q8NFI4 369 aaPredicted RBP18.96■□□□□ 0.63
MRPL28-208ENST00000469744 AGO2Q9UKV8 859 aaKnown RBP18.96■□□□□ 0.63
MRPL28-208ENST00000469744 FRMD3A2A2Y4 597 aa18.95■□□□□ 0.62
MRPL28-208ENST00000469744 TULP1O00294 542 aaPredicted RBP18.95■□□□□ 0.62
MRPL28-208ENST00000469744 SYN3O14994 580 aa18.95■□□□□ 0.62
MRPL28-208ENST00000469744 PDGFBP01127 241 aaPredicted RBP18.95■□□□□ 0.62
MRPL28-208ENST00000469744 GYPCP04921 128 aa18.95■□□□□ 0.62
MRPL28-208ENST00000469744 ADSSP30520 456 aa18.95■□□□□ 0.62
MRPL28-208ENST00000469744 LRPAP1P30533 357 aa18.95■□□□□ 0.62
MRPL28-208ENST00000469744 UBXN1Q04323 297 aa18.95■□□□□ 0.62
MRPL28-208ENST00000469744 GOLGA8FQ08AF8 430 aa18.95■□□□□ 0.62
MRPL28-208ENST00000469744 GOLGA8DPQ0D2H9 430 aa18.95■□□□□ 0.62
MRPL28-208ENST00000469744 TMTC1Q8IUR5 882 aa18.95■□□□□ 0.62
MRPL28-208ENST00000469744 ZSWIM2Q8NEG5 633 aa18.95■□□□□ 0.62
MRPL28-208ENST00000469744 RSAD2Q8WXG1 361 aa18.95■□□□□ 0.62
MRPL28-208ENST00000469744 POMGNT1Q8WZA1 660 aa18.95■□□□□ 0.62
MRPL28-208ENST00000469744 HPS3Q969F9 1004 aa18.95■□□□□ 0.62
MRPL28-208ENST00000469744 HVCN1Q96D96 273 aa18.95■□□□□ 0.62
MRPL28-208ENST00000469744 NUP58Q9BVL2 599 aa18.95■□□□□ 0.62
MRPL28-208ENST00000469744 SLC39A2Q9NP94 309 aa18.95■□□□□ 0.62
MRPL28-208ENST00000469744 PPP2R2CQ9Y2T4 447 aa18.95■□□□□ 0.62
MRPL28-208ENST00000469744 TIMM13Q9Y5L4 95 aaPredicted RBP18.95■□□□□ 0.62
MRPL28-208ENST00000469744 STYXL1Q9Y6J8 313 aa18.95■□□□□ 0.62
MRPL28-208ENST00000469744 NOTCH4Q99466 2003 aa18.94■□□□□ 0.62
MRPL28-208ENST00000469744 WDR27A2RRH5 827 aa18.94■□□□□ 0.62
MRPL28-208ENST00000469744 ADRB2P07550 413 aa18.94■□□□□ 0.62
MRPL28-208ENST00000469744 ETF1P62495 437 aaKnown RBP18.94■□□□□ 0.62
MRPL28-208ENST00000469744 CTXN3Q4LDR2 81 aa18.94■□□□□ 0.62
MRPL28-208ENST00000469744 SLFN12LQ6IEE8 588 aa18.94■□□□□ 0.62
MRPL28-208ENST00000469744 SLC8B1Q6J4K2 584 aa18.94■□□□□ 0.62
MRPL28-208ENST00000469744 GLIS3Q8NEA6 775 aa18.94■□□□□ 0.62
MRPL28-208ENST00000469744 MFSD14AQ96MC6 490 aa18.94■□□□□ 0.62
MRPL28-208ENST00000469744 ACCSQ96QU6 501 aa18.94■□□□□ 0.62
MRPL28-208ENST00000469744 TSG101Q99816 390 aa18.94■□□□□ 0.62
MRPL28-208ENST00000469744 TUBGCP2Q9BSJ2 902 aa18.94■□□□□ 0.62
MRPL28-208ENST00000469744 KCNK12Q9HB15 430 aa18.94■□□□□ 0.62
MRPL28-208ENST00000469744 OLFML3Q9NRN5 406 aa18.94■□□□□ 0.62
MRPL28-208ENST00000469744 HCFC1R1Q9NWW0 138 aa18.94■□□□□ 0.62
MRPL28-208ENST00000469744 FBXL5Q9UKA1 691 aa18.94■□□□□ 0.62
MRPL28-208ENST00000469744 PCDHB8Q9UN66 801 aa18.94■□□□□ 0.62
MRPL28-208ENST00000469744 SCN1AP35498 2009 aa18.93■□□□□ 0.62
MRPL28-208ENST00000469744 KMT2EQ8IZD2 1858 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms