RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 CYFIP2Q96F07 1278 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 ABHD8Q96I13 439 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 EIF2AQ9BY44 585 aaKnown RBP9.93□□□□□ -0.82
SMC1A-205ENST00000469129 SENP6Q9GZR1 1112 aaPredicted RBP9.93□□□□□ -0.82
SMC1A-205ENST00000469129 LHX5Q9H2C1 402 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 GOLPH3Q9H4A6 298 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 NXF3Q9H4D5 531 aaKnown RBP9.93□□□□□ -0.82
SMC1A-205ENST00000469129 SLITRK6Q9H5Y7 841 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 CDHR5Q9HBB8 845 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 RBM12Q9NTZ6 932 aaKnown RBP9.93□□□□□ -0.82
SMC1A-205ENST00000469129 PARVAQ9NVD7 372 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 RNF216Q9NWF9 866 aaPredicted RBP9.93□□□□□ -0.82
SMC1A-205ENST00000469129 WDR35Q9P2L0 1181 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 DDX20Q9UHI6 824 aaKnown RBP9.93□□□□□ -0.82
SMC1A-205ENST00000469129 BARX2Q9UMQ3 279 aaPredicted RBP9.93□□□□□ -0.82
SMC1A-205ENST00000469129 POLIQ9UNA4 740 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 ALG6Q9Y672 507 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 CDY2AQ9Y6F7 541 aa9.93□□□□□ -0.82
SMC1A-205ENST00000469129 A0A0U1RQG5 324 aaPredicted RBP9.92□□□□□ -0.82
SMC1A-205ENST00000469129 MYO1FO00160 1098 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 GPR182O15218 404 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 PROSCO94903 275 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 KCNE1P15382 129 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 ELNP15502 786 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 COMTP21964 271 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 MMP8P22894 467 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 RRM1P23921 792 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 CCND3P30281 292 aaPredicted RBP9.92□□□□□ -0.82
SMC1A-205ENST00000469129 RAP1GAPP47736 663 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 RAD23BP54727 409 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 GSCP56915 257 aaPredicted RBP9.92□□□□□ -0.82
SMC1A-205ENST00000469129 RWDD2BP57060 319 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 PTK7Q13308 1070 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 XKR4Q5GH76 650 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 UBXN11Q5T124 520 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 MAP3K21Q5TCX8 1036 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 PLEKHA7Q6IQ23 1121 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 GDF6Q6KF10 455 aaPredicted RBP9.92□□□□□ -0.82
SMC1A-205ENST00000469129 DNAJC24Q6P3W2 148 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 ALKAL1Q6UXT8 129 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 MMS22LQ6ZRQ5 1243 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 UNC93AQ86WB7 457 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 ERICH1Q86X53 443 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 C1orf131Q8NDD1 294 aaKnown RBP9.92□□□□□ -0.82
SMC1A-205ENST00000469129 IPO4Q8TEX9 1081 aaKnown RBP9.92□□□□□ -0.82
SMC1A-205ENST00000469129 MAIP1Q8WWC4 291 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 TMEM176AQ96HP8 235 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 RNPC3Q96LT9 517 aaKnown RBP9.92□□□□□ -0.82
SMC1A-205ENST00000469129 RUNDC3BQ96NL0 473 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 PNKPQ96T60 521 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 APOL6Q9BWW8 343 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 NT5C1AQ9BXI3 368 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 ACBD3Q9H3P7 528 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 SMYD3Q9H7B4 428 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 SLC38A7Q9NVC3 462 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 EHD2Q9NZN4 543 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 STIM2Q9P246 746 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 PARP2Q9UGN5 583 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 IP6K2Q9UHH9 426 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 NOD1Q9Y239 953 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 IPPQ9Y573 584 aa9.92□□□□□ -0.82
SMC1A-205ENST00000469129 PATJQ8NI35 1801 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 KRIT1O00522 736 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 PSTPIP1O43586 416 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 CALCAP01258 141 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 SETSIPP0DME0 302 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 CETN2P41208 172 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 TAF6P49848 677 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 SNX16P57768 344 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 VSNL1P62760 191 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 MGAT3Q09327 533 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 PTP4A2Q12974 167 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 TRIM32Q13049 653 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 ZBTB6Q15916 424 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 KCNA10Q16322 511 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 PTGISQ16647 500 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 LONRF2Q1L5Z9 754 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 ZNF394Q53GI3 561 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 FBXO47Q5MNV8 452 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 C9orf57Q5W0N0 161 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 CCSAPQ6IQ19 270 aaPredicted RBP9.91□□□□□ -0.82
SMC1A-205ENST00000469129 SLC4A11Q8NBS3 891 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 C3orf20Q8ND61 904 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 CCDC26Q8TAB7 109 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 PPP1R13LQ8WUF5 828 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.91□□□□□ -0.82
SMC1A-205ENST00000469129 CD101Q93033 1021 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 MS4A14Q96JA4 679 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 TSEN34Q9BSV6 310 aaKnown RBP9.91□□□□□ -0.82
SMC1A-205ENST00000469129 SEZ6LQ9BYH1 1024 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 SDCBP2Q9H190 292 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.91□□□□□ -0.82
SMC1A-205ENST00000469129 TUBGCP4Q9UGJ1 667 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 TMEM59LQ9UK28 342 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 MTUS1Q9ULD2 1270 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.91□□□□□ -0.82
SMC1A-205ENST00000469129 PCDHA3Q9Y5H8 950 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 SQORQ9Y6N5 450 aa9.91□□□□□ -0.82
SMC1A-205ENST00000469129 SMIM28A0A1B0GU29 152 aa9.9□□□□□ -0.82
SMC1A-205ENST00000469129 M0QYV0 167 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms