RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 NDUFA8P51970 172 aa18.42■□□□□ 0.54
SSBP1-207ENST00000468267 RBP5P82980 135 aa18.42■□□□□ 0.54
SSBP1-207ENST00000468267 PSMD2Q13200 908 aa18.42■□□□□ 0.54
SSBP1-207ENST00000468267 PLD1Q13393 1074 aa18.42■□□□□ 0.54
SSBP1-207ENST00000468267 SNRNP35Q16560 246 aaKnown RBP18.42■□□□□ 0.54
SSBP1-207ENST00000468267 KNOP1Q1ED39 458 aaKnown RBP18.42■□□□□ 0.54
SSBP1-207ENST00000468267 CYP4A22Q5TCH4 519 aa18.42■□□□□ 0.54
SSBP1-207ENST00000468267 HS2ST1Q7LGA3 356 aa18.42■□□□□ 0.54
SSBP1-207ENST00000468267 HS6ST3Q8IZP7 471 aa18.42■□□□□ 0.54
SSBP1-207ENST00000468267 ATAD1Q8NBU5 361 aa18.42■□□□□ 0.54
SSBP1-207ENST00000468267 TCEAL4Q96EI5 215 aa18.42■□□□□ 0.54
SSBP1-207ENST00000468267 MCRS1Q96EZ8 462 aa18.42■□□□□ 0.54
SSBP1-207ENST00000468267 ANKRD36BP1Q96IX9 119 aa18.42■□□□□ 0.54
SSBP1-207ENST00000468267 MTMR12Q9C0I1 747 aa18.42■□□□□ 0.54
SSBP1-207ENST00000468267 MFSD1Q9H3U5 465 aa18.42■□□□□ 0.54
SSBP1-207ENST00000468267 HSFX1Q9UBD0 423 aa18.42■□□□□ 0.54
SSBP1-207ENST00000468267 SLC27A5Q9Y2P5 690 aa18.42■□□□□ 0.54
SSBP1-207ENST00000468267 A0A1W2PQ27 194 aa18.41■□□□□ 0.54
SSBP1-207ENST00000468267 A0A1W2PQ64 194 aa18.41■□□□□ 0.54
SSBP1-207ENST00000468267 A0A1W2PQD8 194 aa18.41■□□□□ 0.54
SSBP1-207ENST00000468267 CFHP08603 1231 aa18.41■□□□□ 0.54
SSBP1-207ENST00000468267 TMEM191BP0C7N4 346 aa18.41■□□□□ 0.54
SSBP1-207ENST00000468267 CCR2P41597 374 aa18.41■□□□□ 0.54
SSBP1-207ENST00000468267 CYP2J2P51589 502 aa18.41■□□□□ 0.54
SSBP1-207ENST00000468267 CLCN5P51795 746 aa18.41■□□□□ 0.54
SSBP1-207ENST00000468267 EPHB3P54753 998 aa18.41■□□□□ 0.54
SSBP1-207ENST00000468267 EPHA5P54756 1037 aa18.41■□□□□ 0.54
SSBP1-207ENST00000468267 STK4Q13043 487 aa18.41■□□□□ 0.54
SSBP1-207ENST00000468267 DUOXA2Q1HG44 320 aa18.41■□□□□ 0.54
SSBP1-207ENST00000468267 KMT5BQ4FZB7 885 aa18.41■□□□□ 0.54
SSBP1-207ENST00000468267 SLC39A12Q504Y0 691 aa18.41■□□□□ 0.54
SSBP1-207ENST00000468267 LMBRD2Q68DH5 695 aaPredicted RBP18.41■□□□□ 0.54
SSBP1-207ENST00000468267 ASTLQ6HA08 431 aaPredicted RBP18.41■□□□□ 0.54
SSBP1-207ENST00000468267 PDZD4Q76G19 769 aaPredicted RBP18.41■□□□□ 0.54
SSBP1-207ENST00000468267 C12orf56Q8IXR9 622 aa18.41■□□□□ 0.54
SSBP1-207ENST00000468267 SIX5Q8N196 739 aa18.41■□□□□ 0.54
SSBP1-207ENST00000468267 XXYLT1Q8NBI6 393 aa18.41■□□□□ 0.54
SSBP1-207ENST00000468267 RDH13Q8NBN7 331 aa18.41■□□□□ 0.54
SSBP1-207ENST00000468267 LEMD2Q8NC56 503 aa18.41■□□□□ 0.54
SSBP1-207ENST00000468267 OR5B17Q8NGF7 314 aa18.41■□□□□ 0.54
SSBP1-207ENST00000468267 PRRX2Q99811 253 aa18.41■□□□□ 0.54
SSBP1-207ENST00000468267 SLC2A4RGQ9NR83 387 aa18.41■□□□□ 0.54
SSBP1-207ENST00000468267 EXOC1Q9NV70 894 aa18.41■□□□□ 0.54
SSBP1-207ENST00000468267 GDAP2Q9NXN4 497 aa18.41■□□□□ 0.54
SSBP1-207ENST00000468267 PTPRJQ12913 1337 aa18.41■□□□□ 0.54
SSBP1-207ENST00000468267 HUS1O60921 280 aa18.4■□□□□ 0.54
SSBP1-207ENST00000468267 TNNC2P02585 160 aa18.4■□□□□ 0.54
SSBP1-207ENST00000468267 KRT19P08727 400 aa18.4■□□□□ 0.54
SSBP1-207ENST00000468267 NPR3P17342 541 aa18.4■□□□□ 0.54
SSBP1-207ENST00000468267 ALDH1A3P47895 512 aa18.4■□□□□ 0.54
SSBP1-207ENST00000468267 BFSP1Q12934 665 aa18.4■□□□□ 0.54
SSBP1-207ENST00000468267 LRRTM3Q86VH5 581 aa18.4■□□□□ 0.54
SSBP1-207ENST00000468267 WDR49Q8IV35 697 aa18.4■□□□□ 0.54
SSBP1-207ENST00000468267 PDCL2Q8N4E4 241 aa18.4■□□□□ 0.54
SSBP1-207ENST00000468267 FSIP1Q8NA03 581 aa18.4■□□□□ 0.54
SSBP1-207ENST00000468267 KIAA0895Q8NCT3 520 aa18.4■□□□□ 0.54
SSBP1-207ENST00000468267 DNAJC25Q9H1X3 360 aa18.4■□□□□ 0.54
SSBP1-207ENST00000468267 ASAH2Q9NR71 780 aa18.4■□□□□ 0.54
SSBP1-207ENST00000468267 L1RE1Q9UN81 338 aa18.4■□□□□ 0.54
SSBP1-207ENST00000468267 ASB3Q9Y575 518 aa18.4■□□□□ 0.54
SSBP1-207ENST00000468267 WDR87Q6ZQQ6 2873 aa18.39■□□□□ 0.53
SSBP1-207ENST00000468267 KRBA1A5PL33 1030 aa18.39■□□□□ 0.53
SSBP1-207ENST00000468267 NRG2O14511 850 aaPredicted RBP18.39■□□□□ 0.53
SSBP1-207ENST00000468267 MOSPD3O75425 235 aa18.39■□□□□ 0.53
SSBP1-207ENST00000468267 MYL4P12829 197 aa18.39■□□□□ 0.53
SSBP1-207ENST00000468267 NUBP1P53384 320 aa18.39■□□□□ 0.53
SSBP1-207ENST00000468267 CYP24A1Q07973 514 aa18.39■□□□□ 0.53
SSBP1-207ENST00000468267 SMARCB1Q12824 385 aa18.39■□□□□ 0.53
SSBP1-207ENST00000468267 PSMD6Q15008 389 aa18.39■□□□□ 0.53
SSBP1-207ENST00000468267 TMEM86AQ8N2M4 240 aa18.39■□□□□ 0.53
SSBP1-207ENST00000468267 TTC9BQ8N6N2 239 aa18.39■□□□□ 0.53
SSBP1-207ENST00000468267 TMEM105Q8N8V8 129 aa18.39■□□□□ 0.53
SSBP1-207ENST00000468267 PRSS33Q8NF86 280 aa18.39■□□□□ 0.53
SSBP1-207ENST00000468267 GOLGA5Q8TBA6 731 aa18.39■□□□□ 0.53
SSBP1-207ENST00000468267 GPR152Q8TDT2 470 aa18.39■□□□□ 0.53
SSBP1-207ENST00000468267 C2orf15Q8WU43 125 aaKnown RBP18.39■□□□□ 0.53
SSBP1-207ENST00000468267 KXD1Q9BQD3 176 aa18.39■□□□□ 0.53
SSBP1-207ENST00000468267 LRRC3Q9BY71 257 aa18.39■□□□□ 0.53
SSBP1-207ENST00000468267 GDPD2Q9HCC8 539 aa18.39■□□□□ 0.53
SSBP1-207ENST00000468267 R3HCC1Q9Y3T6 440 aaKnown RBP18.39■□□□□ 0.53
SSBP1-207ENST00000468267 VPS13AQ96RL7 3174 aa18.38■□□□□ 0.53
SSBP1-207ENST00000468267 PRPF40AO75400 957 aaKnown RBP18.38■□□□□ 0.53
SSBP1-207ENST00000468267 ECI2O75521 394 aa18.38■□□□□ 0.53
SSBP1-207ENST00000468267 SOAT2O75908 522 aa18.38■□□□□ 0.53
SSBP1-207ENST00000468267 RPN1P04843 607 aaKnown RBP18.38■□□□□ 0.53
SSBP1-207ENST00000468267 DLATP10515 647 aaKnown RBP18.38■□□□□ 0.53
SSBP1-207ENST00000468267 TUFMP49411 452 aaKnown RBP18.38■□□□□ 0.53
SSBP1-207ENST00000468267 GPC5P78333 572 aa18.38■□□□□ 0.53
SSBP1-207ENST00000468267 MYO1EQ12965 1108 aa18.38■□□□□ 0.53
SSBP1-207ENST00000468267 DCP1BQ8IZD4 617 aaKnown RBP18.38■□□□□ 0.53
SSBP1-207ENST00000468267 TOP6BLQ8N6T0 577 aa18.38■□□□□ 0.53
SSBP1-207ENST00000468267 FLCNQ8NFG4 579 aa18.38■□□□□ 0.53
SSBP1-207ENST00000468267 SPATA18Q8TC71 538 aa18.38■□□□□ 0.53
SSBP1-207ENST00000468267 HPDLQ96IR7 371 aa18.38■□□□□ 0.53
SSBP1-207ENST00000468267 FNBP1Q96RU3 617 aa18.38■□□□□ 0.53
SSBP1-207ENST00000468267 GOLPH3LQ9H4A5 285 aa18.38■□□□□ 0.53
SSBP1-207ENST00000468267 CA14Q9ULX7 337 aa18.38■□□□□ 0.53
SSBP1-207ENST00000468267 SNX9Q9Y5X1 595 aa18.38■□□□□ 0.53
SSBP1-207ENST00000468267 F5P12259 2224 aa18.37■□□□□ 0.53
SSBP1-207ENST00000468267 TNNI1P19237 187 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms