RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 LRG1P02750 347 aa16.32■□□□□ 0.2
ATG4B-215ENST00000468018 RHOP08100 348 aa16.32■□□□□ 0.2
ATG4B-215ENST00000468018 GBP2P32456 591 aaPredicted RBP16.32■□□□□ 0.2
ATG4B-215ENST00000468018 MCCD1P59942 119 aaPredicted RBP16.32■□□□□ 0.2
ATG4B-215ENST00000468018 SLC5A9Q2M3M2 681 aa16.32■□□□□ 0.2
ATG4B-215ENST00000468018 PABPC1LQ4VXU2 614 aaKnown RBP16.32■□□□□ 0.2
ATG4B-215ENST00000468018 ZCWPW2Q504Y3 356 aa16.32■□□□□ 0.2
ATG4B-215ENST00000468018 COBLL1Q53SF7 1204 aa16.32■□□□□ 0.2
ATG4B-215ENST00000468018 POTEHQ6S545 545 aa16.32■□□□□ 0.2
ATG4B-215ENST00000468018 TRAPPC11Q7Z392 1133 aa16.32■□□□□ 0.2
ATG4B-215ENST00000468018 UBALD2Q8IYN6 164 aa16.32■□□□□ 0.2
ATG4B-215ENST00000468018 PDCL2Q8N4E4 241 aa16.32■□□□□ 0.2
ATG4B-215ENST00000468018 TOP6BLQ8N6T0 577 aa16.32■□□□□ 0.2
ATG4B-215ENST00000468018 ITFG1Q8TB96 612 aa16.32■□□□□ 0.2
ATG4B-215ENST00000468018 PARD3BQ8TEW8 1205 aa16.32■□□□□ 0.2
ATG4B-215ENST00000468018 NXPE3Q969Y0 559 aa16.32■□□□□ 0.2
ATG4B-215ENST00000468018 PKMYT1Q99640 499 aa16.32■□□□□ 0.2
ATG4B-215ENST00000468018 LRRC3Q9BY71 257 aa16.32■□□□□ 0.2
ATG4B-215ENST00000468018 SMOC2Q9H3U7 446 aa16.32■□□□□ 0.2
ATG4B-215ENST00000468018 CDH7Q9ULB5 785 aa16.32■□□□□ 0.2
ATG4B-215ENST00000468018 YIPF1Q9Y548 306 aa16.32■□□□□ 0.2
ATG4B-215ENST00000468018 MAPK13O15264 365 aa16.31■□□□□ 0.2
ATG4B-215ENST00000468018 MICAL2O94851 1124 aa16.31■□□□□ 0.2
ATG4B-215ENST00000468018 STAU1O95793 577 aaKnown RBP16.31■□□□□ 0.2
ATG4B-215ENST00000468018 TNNC2P02585 160 aa16.31■□□□□ 0.2
ATG4B-215ENST00000468018 NR3C1P04150 777 aa16.31■□□□□ 0.2
ATG4B-215ENST00000468018 DLATP10515 647 aaKnown RBP16.31■□□□□ 0.2
ATG4B-215ENST00000468018 PTPN2P17706 415 aa16.31■□□□□ 0.2
ATG4B-215ENST00000468018 CASP4P49662 377 aa16.31■□□□□ 0.2
ATG4B-215ENST00000468018 TWF1Q12792 350 aa16.31■□□□□ 0.2
ATG4B-215ENST00000468018 PNOCQ13519 176 aa16.31■□□□□ 0.2
ATG4B-215ENST00000468018 HFE2Q6ZVN8 426 aa16.31■□□□□ 0.2
ATG4B-215ENST00000468018 DPH6Q7L8W6 267 aa16.31■□□□□ 0.2
ATG4B-215ENST00000468018 LRRTM3Q86VH5 581 aa16.31■□□□□ 0.2
ATG4B-215ENST00000468018 METTL23Q86XA0 190 aa16.31■□□□□ 0.2
ATG4B-215ENST00000468018 TMEM86AQ8N2M4 240 aa16.31■□□□□ 0.2
ATG4B-215ENST00000468018 ATAD1Q8NBU5 361 aa16.31■□□□□ 0.2
ATG4B-215ENST00000468018 C2orf15Q8WU43 125 aaKnown RBP16.31■□□□□ 0.2
ATG4B-215ENST00000468018 FGF13Q92913 245 aa16.31■□□□□ 0.2
ATG4B-215ENST00000468018 CCDC47Q96A33 483 aaKnown RBP16.31■□□□□ 0.2
ATG4B-215ENST00000468018 CCDC34Q96HJ3 373 aa16.31■□□□□ 0.2
ATG4B-215ENST00000468018 PGLYRP2Q96PD5 576 aa16.31■□□□□ 0.2
ATG4B-215ENST00000468018 DNAJC25Q9H1X3 360 aa16.31■□□□□ 0.2
ATG4B-215ENST00000468018 POLIQ9UNA4 740 aa16.31■□□□□ 0.2
ATG4B-215ENST00000468018 DUSP12Q9UNI6 340 aa16.31■□□□□ 0.2
ATG4B-215ENST00000468018 ZNF638Q14966 1978 aaKnown RBP16.3■□□□□ 0.2
ATG4B-215ENST00000468018 ANAPC1Q9H1A4 1944 aa16.3■□□□□ 0.2
ATG4B-215ENST00000468018 GOLGA6L4A6NEF3 574 aa16.3■□□□□ 0.2
ATG4B-215ENST00000468018 TMEM221A6NGB7 291 aa16.3■□□□□ 0.2
ATG4B-215ENST00000468018 M0R296 226 aa16.3■□□□□ 0.2
ATG4B-215ENST00000468018 NRG2O14511 850 aaPredicted RBP16.3■□□□□ 0.2
ATG4B-215ENST00000468018 MOSPD3O75425 235 aa16.3■□□□□ 0.2
ATG4B-215ENST00000468018 KIF20AO95235 890 aa16.3■□□□□ 0.2
ATG4B-215ENST00000468018 CST3P01034 146 aaPredicted RBP16.3■□□□□ 0.2
ATG4B-215ENST00000468018 KRT19P08727 400 aa16.3■□□□□ 0.2
ATG4B-215ENST00000468018 TNNI1P19237 187 aa16.3■□□□□ 0.2
ATG4B-215ENST00000468018 SMARCB1Q12824 385 aa16.3■□□□□ 0.2
ATG4B-215ENST00000468018 BFSP1Q12934 665 aa16.3■□□□□ 0.2
ATG4B-215ENST00000468018 DUSP4Q13115 394 aa16.3■□□□□ 0.2
ATG4B-215ENST00000468018 TDGQ13569 410 aa16.3■□□□□ 0.2
ATG4B-215ENST00000468018 HTR4Q13639 388 aa16.3■□□□□ 0.2
ATG4B-215ENST00000468018 SOWAHAQ2M3V2 549 aa16.3■□□□□ 0.2
ATG4B-215ENST00000468018 OSTM1Q86WC4 334 aa16.3■□□□□ 0.2
ATG4B-215ENST00000468018 NPAS3Q8IXF0 933 aa16.3■□□□□ 0.2
ATG4B-215ENST00000468018 THEM5Q8N1Q8 247 aa16.3■□□□□ 0.2
ATG4B-215ENST00000468018 TTC9BQ8N6N2 239 aa16.3■□□□□ 0.2
ATG4B-215ENST00000468018 KBTBD7Q8WVZ9 684 aa16.3■□□□□ 0.2
ATG4B-215ENST00000468018 CCDC127Q96BQ5 260 aa16.3■□□□□ 0.2
ATG4B-215ENST00000468018 HPDLQ96IR7 371 aa16.3■□□□□ 0.2
ATG4B-215ENST00000468018 GSDMAQ96QA5 445 aa16.3■□□□□ 0.2
ATG4B-215ENST00000468018 FNBP1Q96RU3 617 aa16.3■□□□□ 0.2
ATG4B-215ENST00000468018 ACBD6Q9BR61 282 aa16.3■□□□□ 0.2
ATG4B-215ENST00000468018 XYLT2Q9H1B5 865 aa16.3■□□□□ 0.2
ATG4B-215ENST00000468018 VRTNQ9H8Y1 702 aa16.3■□□□□ 0.2
ATG4B-215ENST00000468018 SNX9Q9Y5X1 595 aa16.3■□□□□ 0.2
ATG4B-215ENST00000468018 LRRIQ3A6PVS8 624 aaPredicted RBP16.29■□□□□ 0.2
ATG4B-215ENST00000468018 CALUO43852 315 aaPredicted RBP16.29■□□□□ 0.2
ATG4B-215ENST00000468018 HUS1O60921 280 aa16.29■□□□□ 0.2
ATG4B-215ENST00000468018 C4BPAP04003 597 aaKnown RBP16.29■□□□□ 0.2
ATG4B-215ENST00000468018 COL9A1P20849 921 aa16.29■□□□□ 0.2
ATG4B-215ENST00000468018 CCR2P41597 374 aa16.29■□□□□ 0.2
ATG4B-215ENST00000468018 MYO1EQ12965 1108 aa16.29■□□□□ 0.2
ATG4B-215ENST00000468018 PLD1Q13393 1074 aa16.29■□□□□ 0.2
ATG4B-215ENST00000468018 TMC8Q8IU68 726 aa16.29■□□□□ 0.2
ATG4B-215ENST00000468018 LEMD2Q8NC56 503 aa16.29■□□□□ 0.2
ATG4B-215ENST00000468018 SPPL2BQ8TCT7 592 aa16.29■□□□□ 0.2
ATG4B-215ENST00000468018 TMC2Q8TDI7 906 aa16.29■□□□□ 0.2
ATG4B-215ENST00000468018 RSAD2Q8WXG1 361 aa16.29■□□□□ 0.2
ATG4B-215ENST00000468018 FGF14Q92915 247 aa16.29■□□□□ 0.2
ATG4B-215ENST00000468018 DDX43Q9NXZ2 648 aaKnown RBP16.29■□□□□ 0.2
ATG4B-215ENST00000468018 PCDHA5Q9Y5H7 936 aa16.29■□□□□ 0.2
ATG4B-215ENST00000468018 COL4A2P08572 1712 aa16.28■□□□□ 0.2
ATG4B-215ENST00000468018 GADD45BO75293 160 aaPredicted RBP16.28■□□□□ 0.2
ATG4B-215ENST00000468018 FAM163BP0C2L3 166 aa16.28■□□□□ 0.2
ATG4B-215ENST00000468018 LHX1P48742 406 aa16.28■□□□□ 0.2
ATG4B-215ENST00000468018 AP3M2P53677 418 aa16.28■□□□□ 0.2
ATG4B-215ENST00000468018 ENPEPQ07075 957 aa16.28■□□□□ 0.2
ATG4B-215ENST00000468018 SLC39A12Q504Y0 691 aa16.28■□□□□ 0.2
ATG4B-215ENST00000468018 INTS6LQ5JSJ4 861 aaKnown RBP16.28■□□□□ 0.2
ATG4B-215ENST00000468018 C1orf220Q5T0J3 134 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms