RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 ATXN3LQ9H3M9 355 aa22.79■■□□□ 1.24
COL9A3-207ENST00000467819 ST6GALNAC4Q9H4F1 302 aa22.79■■□□□ 1.24
COL9A3-207ENST00000467819 DPP3Q9NY33 737 aa22.79■■□□□ 1.24
COL9A3-207ENST00000467819 NCDNQ9UBB6 729 aa22.79■■□□□ 1.24
COL9A3-207ENST00000467819 C2CD2Q9Y426 696 aa22.79■■□□□ 1.24
COL9A3-207ENST00000467819 ASB3Q9Y575 518 aa22.79■■□□□ 1.24
COL9A3-207ENST00000467819 TULP1O00294 542 aaPredicted RBP22.78■■□□□ 1.24
COL9A3-207ENST00000467819 CYB561D2O14569 222 aa22.78■■□□□ 1.24
COL9A3-207ENST00000467819 CYP11A1P05108 521 aa22.78■■□□□ 1.24
COL9A3-207ENST00000467819 GABRR2P28476 465 aa22.78■■□□□ 1.24
COL9A3-207ENST00000467819 TAF6P49848 677 aa22.78■■□□□ 1.24
COL9A3-207ENST00000467819 PTPAQ15257 358 aa22.78■■□□□ 1.24
COL9A3-207ENST00000467819 GAREM2Q75VX8 874 aa22.78■■□□□ 1.24
COL9A3-207ENST00000467819 ZNF720Q7Z2F6 126 aa22.78■■□□□ 1.24
COL9A3-207ENST00000467819 METTL23Q86XA0 190 aa22.78■■□□□ 1.24
COL9A3-207ENST00000467819 FAM200AQ8TCP9 573 aa22.78■■□□□ 1.24
COL9A3-207ENST00000467819 E2F7Q96AV8 911 aa22.78■■□□□ 1.24
COL9A3-207ENST00000467819 LPIN3Q9BQK8 851 aa22.78■■□□□ 1.24
COL9A3-207ENST00000467819 LMAN1LQ9HAT1 526 aa22.78■■□□□ 1.24
COL9A3-207ENST00000467819 STK17AQ9UEE5 414 aa22.78■■□□□ 1.24
COL9A3-207ENST00000467819 CCDC39Q9UFE4 941 aa22.78■■□□□ 1.24
COL9A3-207ENST00000467819 FBXO2Q9UK22 296 aaPredicted RBP22.78■■□□□ 1.24
COL9A3-207ENST00000467819 STYXL1Q9Y6J8 313 aa22.78■■□□□ 1.24
COL9A3-207ENST00000467819 OBSL1O75147 1896 aa22.77■■□□□ 1.24
COL9A3-207ENST00000467819 ARNTLO00327 626 aa22.77■■□□□ 1.24
COL9A3-207ENST00000467819 CCNE1P24864 410 aa22.77■■□□□ 1.24
COL9A3-207ENST00000467819 CUL4AQ13619 759 aa22.77■■□□□ 1.24
COL9A3-207ENST00000467819 MGAT5BQ3V5L5 792 aa22.77■■□□□ 1.24
COL9A3-207ENST00000467819 GPR158Q5T848 1215 aa22.77■■□□□ 1.24
COL9A3-207ENST00000467819 FAM173BQ6P4H8 233 aa22.77■■□□□ 1.24
COL9A3-207ENST00000467819 ITIH5Q86UX2 942 aa22.77■■□□□ 1.24
COL9A3-207ENST00000467819 ARID3BQ8IVW6 561 aaPredicted RBP22.77■■□□□ 1.24
COL9A3-207ENST00000467819 EFCAB13Q8IY85 973 aa22.77■■□□□ 1.24
COL9A3-207ENST00000467819 HVCN1Q96D96 273 aa22.77■■□□□ 1.24
COL9A3-207ENST00000467819 CLIC6Q96NY7 704 aa22.77■■□□□ 1.24
COL9A3-207ENST00000467819 MKNK1Q9BUB5 465 aa22.77■■□□□ 1.24
COL9A3-207ENST00000467819 ZCWPW1Q9H0M4 648 aa22.77■■□□□ 1.24
COL9A3-207ENST00000467819 MRPL44Q9H9J2 332 aaKnown RBP22.77■■□□□ 1.24
COL9A3-207ENST00000467819 TBC1D7Q9P0N9 293 aa22.77■■□□□ 1.24
COL9A3-207ENST00000467819 DSEQ9UL01 958 aa22.77■■□□□ 1.24
COL9A3-207ENST00000467819 SMG5Q9UPR3 1016 aaKnown RBP22.77■■□□□ 1.24
COL9A3-207ENST00000467819 MYMKA6NI61 221 aa22.76■■□□□ 1.23
COL9A3-207ENST00000467819 SLC38A8A6NNN8 435 aa22.76■■□□□ 1.23
COL9A3-207ENST00000467819 DPYSL4O14531 572 aa22.76■■□□□ 1.23
COL9A3-207ENST00000467819 PDCP20941 246 aa22.76■■□□□ 1.23
COL9A3-207ENST00000467819 SOX9P48436 509 aa22.76■■□□□ 1.23
COL9A3-207ENST00000467819 KPNA1P52294 538 aaPredicted RBP22.76■■□□□ 1.23
COL9A3-207ENST00000467819 CEBPZQ03701 1054 aaKnown RBP22.76■■□□□ 1.23
COL9A3-207ENST00000467819 ARHGAP15Q53QZ3 475 aa22.76■■□□□ 1.23
COL9A3-207ENST00000467819 RRAGBQ5VZM2 374 aa22.76■■□□□ 1.23
COL9A3-207ENST00000467819 CRELD2Q6UXH1 353 aaPredicted RBP22.76■■□□□ 1.23
COL9A3-207ENST00000467819 THEM5Q8N1Q8 247 aa22.76■■□□□ 1.23
COL9A3-207ENST00000467819 NELL1Q92832 810 aa22.76■■□□□ 1.23
COL9A3-207ENST00000467819 BORCS6Q96GS4 357 aa22.76■■□□□ 1.23
COL9A3-207ENST00000467819 HSFX1Q9UBD0 423 aa22.76■■□□□ 1.23
COL9A3-207ENST00000467819 SRPRBQ9Y5M8 271 aaKnown RBP22.76■■□□□ 1.23
COL9A3-207ENST00000467819 CHADO15335 359 aa22.75■■□□□ 1.23
COL9A3-207ENST00000467819 LILRB5O75023 590 aa22.75■■□□□ 1.23
COL9A3-207ENST00000467819 PPP1R37O75864 691 aa22.75■■□□□ 1.23
COL9A3-207ENST00000467819 FGF19O95750 216 aa22.75■■□□□ 1.23
COL9A3-207ENST00000467819 ADSSP30520 456 aa22.75■■□□□ 1.23
COL9A3-207ENST00000467819 TXLNAP40222 546 aa22.75■■□□□ 1.23
COL9A3-207ENST00000467819 TUFMP49411 452 aaKnown RBP22.75■■□□□ 1.23
COL9A3-207ENST00000467819 CYP4F8P98187 520 aa22.75■■□□□ 1.23
COL9A3-207ENST00000467819 KCNA1Q09470 495 aa22.75■■□□□ 1.23
COL9A3-207ENST00000467819 FCHO2Q0JRZ9 810 aa22.75■■□□□ 1.23
COL9A3-207ENST00000467819 RESTQ13127 1097 aa22.75■■□□□ 1.23
COL9A3-207ENST00000467819 VEPH1Q14D04 833 aa22.75■■□□□ 1.23
COL9A3-207ENST00000467819 WSCD1Q658N2 575 aa22.75■■□□□ 1.23
COL9A3-207ENST00000467819 TTC8Q8TAM2 541 aa22.75■■□□□ 1.23
COL9A3-207ENST00000467819 ZFYVE19Q96K21 471 aa22.75■■□□□ 1.23
COL9A3-207ENST00000467819 IL18RAPO95256 599 aa22.74■■□□□ 1.23
COL9A3-207ENST00000467819 ATF6P18850 670 aa22.74■■□□□ 1.23
COL9A3-207ENST00000467819 POSTNQ15063 836 aa22.74■■□□□ 1.23
COL9A3-207ENST00000467819 SV2CQ496J9 727 aa22.74■■□□□ 1.23
COL9A3-207ENST00000467819 SV2BQ7L1I2 683 aa22.74■■□□□ 1.23
COL9A3-207ENST00000467819 GIPC2Q8TF65 315 aa22.74■■□□□ 1.23
COL9A3-207ENST00000467819 DNAJC19Q96DA6 116 aa22.74■■□□□ 1.23
COL9A3-207ENST00000467819 LRRC3BQ96PB8 259 aa22.74■■□□□ 1.23
COL9A3-207ENST00000467819 ACCSQ96QU6 501 aa22.74■■□□□ 1.23
COL9A3-207ENST00000467819 FAM213AQ9BRX8 229 aa22.74■■□□□ 1.23
COL9A3-207ENST00000467819 EPC1Q9H2F5 836 aa22.74■■□□□ 1.23
COL9A3-207ENST00000467819 ABI2Q9NYB9 513 aaPredicted RBP22.74■■□□□ 1.23
COL9A3-207ENST00000467819 SEL1LQ9UBV2 794 aa22.74■■□□□ 1.23
COL9A3-207ENST00000467819 KPNA7A9QM74 516 aa22.73■■□□□ 1.23
COL9A3-207ENST00000467819 GCNT3O95395 438 aa22.73■■□□□ 1.23
COL9A3-207ENST00000467819 PRAMEF12O95522 483 aa22.73■■□□□ 1.23
COL9A3-207ENST00000467819 CHRNB1P11230 501 aa22.73■■□□□ 1.23
COL9A3-207ENST00000467819 GAP43P17677 238 aa22.73■■□□□ 1.23
COL9A3-207ENST00000467819 CCR3P51677 355 aa22.73■■□□□ 1.23
COL9A3-207ENST00000467819 WNT7BP56706 349 aa22.73■■□□□ 1.23
COL9A3-207ENST00000467819 TAF12Q16514 161 aa22.73■■□□□ 1.23
COL9A3-207ENST00000467819 L1TD1Q5T7N2 865 aaKnown RBP22.73■■□□□ 1.23
COL9A3-207ENST00000467819 LRRTM3Q86VH5 581 aa22.73■■□□□ 1.23
COL9A3-207ENST00000467819 ZSWIM2Q8NEG5 633 aa22.73■■□□□ 1.23
COL9A3-207ENST00000467819 SAAL1Q96ER3 474 aa22.73■■□□□ 1.23
COL9A3-207ENST00000467819 ZNF560Q96MR9 790 aa22.73■■□□□ 1.23
COL9A3-207ENST00000467819 GCNAQ96QF7 691 aa22.73■■□□□ 1.23
COL9A3-207ENST00000467819 IER2Q9BTL4 223 aa22.73■■□□□ 1.23
COL9A3-207ENST00000467819 STRA6Q9BX79 667 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms