RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 CFAP52Q8N1V2 620 aa5.22□□□□□ -1.57
XRN1-206ENST00000467077 PNLDC1Q8NA58 520 aaKnown RBP5.22□□□□□ -1.57
XRN1-206ENST00000467077 TGFBRAP1Q8WUH2 860 aa5.22□□□□□ -1.57
XRN1-206ENST00000467077 ATRIPQ8WXE1 791 aa5.22□□□□□ -1.57
XRN1-206ENST00000467077 KLHL32Q96NJ5 620 aa5.22□□□□□ -1.57
XRN1-206ENST00000467077 PACSIN1Q9BY11 444 aa5.22□□□□□ -1.57
XRN1-206ENST00000467077 ACTRT3Q9BYD9 372 aa5.22□□□□□ -1.57
XRN1-206ENST00000467077 PDGFCQ9NRA1 345 aa5.22□□□□□ -1.57
XRN1-206ENST00000467077 VSX1Q9NZR4 365 aaPredicted RBP5.22□□□□□ -1.57
XRN1-206ENST00000467077 PROCRQ9UNN8 238 aa5.22□□□□□ -1.57
XRN1-206ENST00000467077 E5RJQ4 531 aa5.21□□□□□ -1.58
XRN1-206ENST00000467077 QSOX1O00391 747 aa5.21□□□□□ -1.58
XRN1-206ENST00000467077 SLC6A4P31645 630 aa5.21□□□□□ -1.58
XRN1-206ENST00000467077 THBS3P49746 956 aa5.21□□□□□ -1.58
XRN1-206ENST00000467077 CTXN1P60606 82 aa5.21□□□□□ -1.58
XRN1-206ENST00000467077 ATP8B2P98198 1209 aa5.21□□□□□ -1.58
XRN1-206ENST00000467077 SEMA3AQ14563 771 aa5.21□□□□□ -1.58
XRN1-206ENST00000467077 DAZAP2Q15038 168 aaPredicted RBP5.21□□□□□ -1.58
XRN1-206ENST00000467077 AARS2Q5JTZ9 985 aaKnown RBP5.21□□□□□ -1.58
XRN1-206ENST00000467077 USP43Q70EL4 1123 aa5.21□□□□□ -1.58
XRN1-206ENST00000467077 IRF2BP2Q7Z5L9 587 aa5.21□□□□□ -1.58
XRN1-206ENST00000467077 NPM2Q86SE8 214 aaKnown RBP5.21□□□□□ -1.58
XRN1-206ENST00000467077 FAM9AQ8IZU1 332 aaPredicted RBP5.21□□□□□ -1.58
XRN1-206ENST00000467077 AOPEPQ8N6M6 819 aa5.21□□□□□ -1.58
XRN1-206ENST00000467077 CLRN3Q8NCR9 226 aa5.21□□□□□ -1.58
XRN1-206ENST00000467077 USP7Q93009 1102 aa5.21□□□□□ -1.58
XRN1-206ENST00000467077 SMOQ99835 787 aa5.21□□□□□ -1.58
XRN1-206ENST00000467077 IMPG2Q9BZV3 1241 aa5.21□□□□□ -1.58
XRN1-206ENST00000467077 NOTCH4Q99466 2003 aa5.21□□□□□ -1.58
XRN1-206ENST00000467077 GRM6O15303 877 aa5.2□□□□□ -1.58
XRN1-206ENST00000467077 TMEM191BP0C7N4 346 aa5.2□□□□□ -1.58
XRN1-206ENST00000467077 MT3P25713 68 aa5.2□□□□□ -1.58
XRN1-206ENST00000467077 NDUFV1P49821 464 aa5.2□□□□□ -1.58
XRN1-206ENST00000467077 TBCCQ15814 346 aa5.2□□□□□ -1.58
XRN1-206ENST00000467077 PABPC1LQ4VXU2 614 aaKnown RBP5.2□□□□□ -1.58
XRN1-206ENST00000467077 ANKRD16Q6P6B7 361 aa5.2□□□□□ -1.58
XRN1-206ENST00000467077 Q6ZTC4 211 aa5.2□□□□□ -1.58
XRN1-206ENST00000467077 FBXO41Q8TF61 875 aa5.2□□□□□ -1.58
XRN1-206ENST00000467077 LYZL4Q96KX0 146 aa5.2□□□□□ -1.58
XRN1-206ENST00000467077 DRC1Q96MC2 740 aa5.2□□□□□ -1.58
XRN1-206ENST00000467077 ASB2Q96Q27 587 aa5.2□□□□□ -1.58
XRN1-206ENST00000467077 TRIB1Q96RU8 372 aa5.2□□□□□ -1.58
XRN1-206ENST00000467077 NACADO15069 1562 aa5.2□□□□□ -1.58
XRN1-206ENST00000467077 ADAMTS3O15072 1205 aa5.19□□□□□ -1.58
XRN1-206ENST00000467077 BCAR3O75815 825 aa5.19□□□□□ -1.58
XRN1-206ENST00000467077 PCSK6P29122 969 aa5.19□□□□□ -1.58
XRN1-206ENST00000467077 ALDH9A1P49189 494 aa5.19□□□□□ -1.58
XRN1-206ENST00000467077 SLC5A3P53794 718 aa5.19□□□□□ -1.58
XRN1-206ENST00000467077 POU6F2P78424 691 aaPredicted RBP5.19□□□□□ -1.58
XRN1-206ENST00000467077 TOR2AQ5JU69 321 aa5.19□□□□□ -1.58
XRN1-206ENST00000467077 TMPRSS9Q7Z410 1059 aa5.19□□□□□ -1.58
XRN1-206ENST00000467077 KRT78Q8N1N4 520 aa5.19□□□□□ -1.58
XRN1-206ENST00000467077 UBXN4Q92575 508 aa5.19□□□□□ -1.58
XRN1-206ENST00000467077 RNPC3Q96LT9 517 aaKnown RBP5.19□□□□□ -1.58
XRN1-206ENST00000467077 OSBPL9Q96SU4 736 aa5.19□□□□□ -1.58
XRN1-206ENST00000467077 C7orf25Q9BPX7 421 aa5.19□□□□□ -1.58
XRN1-206ENST00000467077 JKAMPQ9P055 326 aa5.19□□□□□ -1.58
XRN1-206ENST00000467077 DKK3Q9UBP4 350 aa5.19□□□□□ -1.58
XRN1-206ENST00000467077 DNM3Q9UQ16 869 aa5.19□□□□□ -1.58
XRN1-206ENST00000467077 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.19□□□□□ -1.58
XRN1-206ENST00000467077 SPATA31A3Q5VYP0 1347 aa5.19□□□□□ -1.58
XRN1-206ENST00000467077 FAM90A8PA6NJQ4 464 aa5.18□□□□□ -1.58
XRN1-206ENST00000467077 GOLGA8AA7E2F4 631 aa5.18□□□□□ -1.58
XRN1-206ENST00000467077 ZNF213O14771 459 aa5.18□□□□□ -1.58
XRN1-206ENST00000467077 ALPLP05186 524 aa5.18□□□□□ -1.58
XRN1-206ENST00000467077 FAM90A13PP0C7W8 464 aa5.18□□□□□ -1.58
XRN1-206ENST00000467077 FAM90A24PP0C7X0 464 aa5.18□□□□□ -1.58
XRN1-206ENST00000467077 EEFSECP57772 596 aaKnown RBP5.18□□□□□ -1.58
XRN1-206ENST00000467077 TWIST1Q15672 202 aa5.18□□□□□ -1.58
XRN1-206ENST00000467077 HOMER1Q86YM7 354 aa5.18□□□□□ -1.58
XRN1-206ENST00000467077 DHX37Q8IY37 1157 aaKnown RBP5.18□□□□□ -1.58
XRN1-206ENST00000467077 DCBLD1Q8N8Z6 715 aa5.18□□□□□ -1.58
XRN1-206ENST00000467077 C8orf58Q8NAV2 365 aa5.18□□□□□ -1.58
XRN1-206ENST00000467077 PPP1R10Q96QC0 940 aaKnown RBP5.18□□□□□ -1.58
XRN1-206ENST00000467077 TXLNGQ9NUQ3 528 aa5.18□□□□□ -1.58
XRN1-206ENST00000467077 WDR17Q8IZU2 1322 aa5.18□□□□□ -1.58
XRN1-206ENST00000467077 H0YIZ8 118 aa5.17□□□□□ -1.58
XRN1-206ENST00000467077 KRT10P13645 584 aa5.17□□□□□ -1.58
XRN1-206ENST00000467077 JUPP14923 745 aa5.17□□□□□ -1.58
XRN1-206ENST00000467077 GTF2H3Q13889 308 aa5.17□□□□□ -1.58
XRN1-206ENST00000467077 CERKLQ49MI3 558 aaPredicted RBP5.17□□□□□ -1.58
XRN1-206ENST00000467077 ZNF618Q5T7W0 954 aa5.17□□□□□ -1.58
XRN1-206ENST00000467077 ZNF365Q70YC5 407 aa5.17□□□□□ -1.58
XRN1-206ENST00000467077 KCNK18Q7Z418 384 aa5.17□□□□□ -1.58
XRN1-206ENST00000467077 CHSY1Q86X52 802 aa5.17□□□□□ -1.58
XRN1-206ENST00000467077 SLC17A8Q8NDX2 589 aa5.17□□□□□ -1.58
XRN1-206ENST00000467077 KLHDC4Q8TBB5 520 aa5.17□□□□□ -1.58
XRN1-206ENST00000467077 LEO1Q8WVC0 666 aaPredicted RBP5.17□□□□□ -1.58
XRN1-206ENST00000467077 FAM118BQ9BPY3 351 aa5.17□□□□□ -1.58
XRN1-206ENST00000467077 ZSWIM4Q9H7M6 989 aa5.17□□□□□ -1.58
XRN1-206ENST00000467077 PCDHGA2Q9Y5H1 932 aa5.17□□□□□ -1.58
XRN1-206ENST00000467077 PRSS44E7EML9 344 aa5.16□□□□□ -1.58
XRN1-206ENST00000467077 HTR6P50406 440 aa5.16□□□□□ -1.58
XRN1-206ENST00000467077 ERV3-1Q14264 604 aa5.16□□□□□ -1.58
XRN1-206ENST00000467077 CCDC144BQ3MJ40 725 aa5.16□□□□□ -1.58
XRN1-206ENST00000467077 PCID2Q5JVF3 399 aa5.16□□□□□ -1.58
XRN1-206ENST00000467077 WDR53Q7Z5U6 358 aaPredicted RBP5.16□□□□□ -1.58
XRN1-206ENST00000467077 RSPH3Q86UC2 560 aa5.16□□□□□ -1.58
XRN1-206ENST00000467077 RHOT1Q8IXI2 618 aa5.16□□□□□ -1.58
XRN1-206ENST00000467077 TMIEQ8NEW7 156 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms