RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 CPNE5Q9HCH3 593 aa13.92□□□□□ -0.18
UBR4-210ENST00000466969 FBXL5Q9UKA1 691 aa13.92□□□□□ -0.18
UBR4-210ENST00000466969 FLNCQ14315 2725 aa13.92□□□□□ -0.18
UBR4-210ENST00000466969 MYO16Q9Y6X6 1858 aa13.92□□□□□ -0.18
UBR4-210ENST00000466969 TNFSF14O43557 240 aa13.91□□□□□ -0.18
UBR4-210ENST00000466969 ZNF883P0CG24 379 aa13.91□□□□□ -0.18
UBR4-210ENST00000466969 CPB1P15086 417 aa13.91□□□□□ -0.18
UBR4-210ENST00000466969 IGFBP6P24592 240 aaPredicted RBP13.91□□□□□ -0.18
UBR4-210ENST00000466969 CLCNKBP51801 687 aa13.91□□□□□ -0.18
UBR4-210ENST00000466969 BFSP1Q12934 665 aa13.91□□□□□ -0.18
UBR4-210ENST00000466969 PDGFRLQ15198 375 aa13.91□□□□□ -0.18
UBR4-210ENST00000466969 NAB2Q15742 525 aa13.91□□□□□ -0.18
UBR4-210ENST00000466969 CTXN3Q4LDR2 81 aa13.91□□□□□ -0.18
UBR4-210ENST00000466969 PLA2G4FQ68DD2 849 aa13.91□□□□□ -0.18
UBR4-210ENST00000466969 PPP1R18Q6NYC8 613 aa13.91□□□□□ -0.18
UBR4-210ENST00000466969 MIER3Q7Z3K6 550 aa13.91□□□□□ -0.18
UBR4-210ENST00000466969 RALYLQ86SE5 291 aaKnown RBP13.91□□□□□ -0.18
UBR4-210ENST00000466969 HSPA12BQ96MM6 686 aa13.91□□□□□ -0.18
UBR4-210ENST00000466969 TEKT3Q9BXF9 490 aa13.91□□□□□ -0.18
UBR4-210ENST00000466969 NRSN2Q9GZP1 204 aa13.91□□□□□ -0.18
UBR4-210ENST00000466969 UNC45AQ9H3U1 944 aa13.91□□□□□ -0.18
UBR4-210ENST00000466969 PLXND1Q9Y4D7 1925 aa13.91□□□□□ -0.18
UBR4-210ENST00000466969 SMCO2A6NFE2 343 aa13.9□□□□□ -0.18
UBR4-210ENST00000466969 MARCH6O60337 910 aa13.9□□□□□ -0.18
UBR4-210ENST00000466969 CER1O95813 267 aa13.9□□□□□ -0.18
UBR4-210ENST00000466969 ALDH1A3P47895 512 aa13.9□□□□□ -0.18
UBR4-210ENST00000466969 CLK2P49760 499 aaKnown RBP13.9□□□□□ -0.18
UBR4-210ENST00000466969 PTENP60484 403 aa13.9□□□□□ -0.18
UBR4-210ENST00000466969 RTP5Q14D33 572 aa13.9□□□□□ -0.18
UBR4-210ENST00000466969 SUZ12Q15022 739 aaKnown RBP13.9□□□□□ -0.18
UBR4-210ENST00000466969 SYCP2LQ5T4T6 812 aa13.9□□□□□ -0.18
UBR4-210ENST00000466969 JAKMIP3Q5VZ66 844 aa13.9□□□□□ -0.18
UBR4-210ENST00000466969 WWC2Q6AWC2 1192 aa13.9□□□□□ -0.18
UBR4-210ENST00000466969 ANO5Q75V66 913 aa13.9□□□□□ -0.18
UBR4-210ENST00000466969 FERMT3Q86UX7 667 aa13.9□□□□□ -0.18
UBR4-210ENST00000466969 TRIML1Q8N9V2 468 aa13.9□□□□□ -0.18
UBR4-210ENST00000466969 RDM1Q8NG50 284 aa13.9□□□□□ -0.18
UBR4-210ENST00000466969 UROC1Q96N76 676 aa13.9□□□□□ -0.18
UBR4-210ENST00000466969 GCNAQ96QF7 691 aa13.9□□□□□ -0.18
UBR4-210ENST00000466969 GAREM1Q9H706 876 aa13.9□□□□□ -0.18
UBR4-210ENST00000466969 ECT2Q9H8V3 914 aa13.9□□□□□ -0.18
UBR4-210ENST00000466969 SYN3O14994 580 aa13.89□□□□□ -0.19
UBR4-210ENST00000466969 TBX3O15119 743 aa13.89□□□□□ -0.19
UBR4-210ENST00000466969 AFPP02771 609 aaKnown RBP13.89□□□□□ -0.19
UBR4-210ENST00000466969 HNRNPLP14866 589 aaKnown RBP eCLIP13.89□□□□□ -0.19
UBR4-210ENST00000466969 AVPR1AP37288 418 aa13.89□□□□□ -0.19
UBR4-210ENST00000466969 MRPS21P82921 87 aaKnown RBP13.89□□□□□ -0.19
UBR4-210ENST00000466969 CYP4F8P98187 520 aa13.89□□□□□ -0.19
UBR4-210ENST00000466969 SCRN1Q12765 414 aa13.89□□□□□ -0.19
UBR4-210ENST00000466969 TFDP1Q14186 410 aa13.89□□□□□ -0.19
UBR4-210ENST00000466969 LRCH2Q5VUJ6 765 aa13.89□□□□□ -0.19
UBR4-210ENST00000466969 ZNF280DQ6N043 979 aa13.89□□□□□ -0.19
UBR4-210ENST00000466969 RNF19BQ6ZMZ0 732 aa13.89□□□□□ -0.19
UBR4-210ENST00000466969 CRYGNQ8WXF5 182 aa13.89□□□□□ -0.19
UBR4-210ENST00000466969 RILPL2Q969X0 211 aa13.89□□□□□ -0.19
UBR4-210ENST00000466969 LIN37Q96GY3 246 aaPredicted RBP13.89□□□□□ -0.19
UBR4-210ENST00000466969 RIT2Q99578 217 aa13.89□□□□□ -0.19
UBR4-210ENST00000466969 DNAJC25Q9H1X3 360 aa13.89□□□□□ -0.19
UBR4-210ENST00000466969 BMP2KQ9NSY1 1161 aaPredicted RBP13.89□□□□□ -0.19
UBR4-210ENST00000466969 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.89□□□□□ -0.19
UBR4-210ENST00000466969 ASB3Q9Y575 518 aa13.89□□□□□ -0.19
UBR4-210ENST00000466969 ARID2Q68CP9 1835 aa13.89□□□□□ -0.19
UBR4-210ENST00000466969 A0A1B0GUA9 196 aa13.88□□□□□ -0.19
UBR4-210ENST00000466969 B4GALT5O43286 388 aa13.88□□□□□ -0.19
UBR4-210ENST00000466969 CILPO75339 1184 aa13.88□□□□□ -0.19
UBR4-210ENST00000466969 RFC5P40937 340 aa13.88□□□□□ -0.19
UBR4-210ENST00000466969 MATKP42679 507 aa13.88□□□□□ -0.19
UBR4-210ENST00000466969 NPEPPSP55786 919 aa13.88□□□□□ -0.19
UBR4-210ENST00000466969 MYO1EQ12965 1108 aa13.88□□□□□ -0.19
UBR4-210ENST00000466969 AMHR2Q16671 573 aa13.88□□□□□ -0.19
UBR4-210ENST00000466969 UPP1Q16831 310 aa13.88□□□□□ -0.19
UBR4-210ENST00000466969 TYW1BQ6NUM6 668 aa13.88□□□□□ -0.19
UBR4-210ENST00000466969 CWC27Q6UX04 472 aaKnown RBP13.88□□□□□ -0.19
UBR4-210ENST00000466969 CD300LGQ6UXG3 332 aa13.88□□□□□ -0.19
UBR4-210ENST00000466969 DNAJB7Q7Z6W7 309 aaPredicted RBP13.88□□□□□ -0.19
UBR4-210ENST00000466969 SLC41A1Q8IVJ1 513 aa13.88□□□□□ -0.19
UBR4-210ENST00000466969 CMTM8Q8IZV2 173 aa13.88□□□□□ -0.19
UBR4-210ENST00000466969 TXNDC5Q8NBS9 432 aaKnown RBP13.88□□□□□ -0.19
UBR4-210ENST00000466969 ZNF248Q8NDW4 579 aa13.88□□□□□ -0.19
UBR4-210ENST00000466969 NAF1Q96HR8 494 aaKnown RBP13.88□□□□□ -0.19
UBR4-210ENST00000466969 CEP170P1Q96L14 293 aa13.88□□□□□ -0.19
UBR4-210ENST00000466969 DHX33Q9H6R0 707 aaKnown RBP13.88□□□□□ -0.19
UBR4-210ENST00000466969 IL21RQ9HBE5 538 aa13.88□□□□□ -0.19
UBR4-210ENST00000466969 ZBTB47Q9UFB7 747 aaPredicted RBP13.88□□□□□ -0.19
UBR4-210ENST00000466969 ZMYM5Q9UJ78 669 aa13.88□□□□□ -0.19
UBR4-210ENST00000466969 PCDHGB2Q9Y5G2 931 aa13.88□□□□□ -0.19
UBR4-210ENST00000466969 USP9YO00507 2555 aaPredicted RBP13.87□□□□□ -0.19
UBR4-210ENST00000466969 TCRBV21S2A2A0A5A6 115 aa13.87□□□□□ -0.19
UBR4-210ENST00000466969 K7EQS6 105 aa13.87□□□□□ -0.19
UBR4-210ENST00000466969 BRINP1O60477 761 aa13.87□□□□□ -0.19
UBR4-210ENST00000466969 RECQL4O94761 1208 aa13.87□□□□□ -0.19
UBR4-210ENST00000466969 SDSP20132 328 aa13.87□□□□□ -0.19
UBR4-210ENST00000466969 CDC25CP30307 473 aa13.87□□□□□ -0.19
UBR4-210ENST00000466969 USP11P51784 963 aa13.87□□□□□ -0.19
UBR4-210ENST00000466969 MBTD1Q05BQ5 628 aa13.87□□□□□ -0.19
UBR4-210ENST00000466969 NR1H3Q13133 447 aa13.87□□□□□ -0.19
UBR4-210ENST00000466969 MRPL58Q14197 206 aaKnown RBP13.87□□□□□ -0.19
UBR4-210ENST00000466969 MXD4Q14582 209 aaPredicted RBP13.87□□□□□ -0.19
UBR4-210ENST00000466969 PTPRNQ16849 979 aa13.87□□□□□ -0.19
UBR4-210ENST00000466969 WDR45BQ5MNZ6 344 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms