RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 PILRBQ9UKJ0 227 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 PCDHA12Q9UN75 941 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 ARHGAP26Q9UNA1 814 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 ZFHX2Q9C0A1 2572 aaPredicted RBP6.2□□□□□ -1.42
CXXC4-202ENST00000466963 TRAV19A0A0A6YYK7 116 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 SMIM28A0A1B0GU29 152 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 C1QTNF9BB2RNN3 333 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 ERVH48-1M5A8F1 160 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 REC8O95072 547 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 C1QTNF9P0C862 333 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 FGFR4P22455 802 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 TUBP50607 506 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 SMTNP53814 917 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 SLC5A9Q2M3M2 681 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 C20orf194Q5TEA3 1177 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 CENPPQ6IPU0 288 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 LRRC69Q6ZNQ3 347 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 CEP57Q86XR8 500 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 CCDC83Q8IWF9 413 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 SNIP1Q8TAD8 396 aaKnown RBP6.2□□□□□ -1.42
CXXC4-202ENST00000466963 USP33Q8TEY7 942 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 ZBTB10Q96DT7 871 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 EIF2AK1Q9BQI3 630 aaKnown RBP6.2□□□□□ -1.42
CXXC4-202ENST00000466963 NRSN2Q9GZP1 204 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 MINDY3Q9H8M7 445 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 USP29Q9HBJ7 922 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 PTPRHQ9HD43 1115 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 TBC1D7Q9P0N9 293 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 STARD13Q9Y3M8 1113 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 C2CD2Q9Y426 696 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 MYO7AQ13402 2215 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 DENND4CQ5VZ89 1909 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 LNP1A1A4G5 178 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 ARHGAP33O14559 1287 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 CDX4O14627 284 aaPredicted RBP6.2□□□□□ -1.42
CXXC4-202ENST00000466963 LZTS3O60299 673 aaPredicted RBP6.2□□□□□ -1.42
CXXC4-202ENST00000466963 LRRN2O75325 713 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 TOM1L1O75674 476 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 SLITRK3O94933 977 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 ADH1CP00326 375 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 MAPTP10636 758 aaKnown RBP6.2□□□□□ -1.42
CXXC4-202ENST00000466963 AVPR1AP37288 418 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 INHBCP55103 352 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 TMEM132AQ24JP5 1023 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 ARID3BQ8IVW6 561 aaPredicted RBP6.2□□□□□ -1.42
CXXC4-202ENST00000466963 LSMEM2Q8N112 164 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 TCHPQ9BT92 498 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 ZCWPW1Q9H0M4 648 aa6.2□□□□□ -1.42
CXXC4-202ENST00000466963 FARP1Q9Y4F1 1045 aaPredicted RBP6.2□□□□□ -1.42
CXXC4-202ENST00000466963 HELZP42694 1942 aaKnown RBP6.19□□□□□ -1.42
CXXC4-202ENST00000466963 CPLX1O14810 134 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 RRP8O43159 456 aaKnown RBP6.19□□□□□ -1.42
CXXC4-202ENST00000466963 IL18RAPO95256 599 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 IGLV3-19P01714 112 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 APODP05090 189 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 MYL4P12829 197 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 CPB1P15086 417 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 TKTP29401 623 aaKnown RBP6.19□□□□□ -1.42
CXXC4-202ENST00000466963 CDC25AP30304 524 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 VASPP50552 380 aaPredicted RBP6.19□□□□□ -1.42
CXXC4-202ENST00000466963 BFSP1Q12934 665 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 STRN3Q13033 797 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 GAS6Q14393 721 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 SF3A2Q15428 464 aaKnown RBP6.19□□□□□ -1.42
CXXC4-202ENST00000466963 SURF1Q15526 300 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 TEAD2Q15562 447 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 TAF12Q16514 161 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 GPR158Q5T848 1215 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 SLFN12LQ6IEE8 588 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 CD300LGQ6UXG3 332 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 TOGARAM2Q6ZUX3 1019 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 ZNF276Q8N554 614 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 SNRNP27Q8WVK2 155 aaKnown RBP6.19□□□□□ -1.42
CXXC4-202ENST00000466963 TMEM143Q96AN5 459 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 TDP1Q9NUW8 608 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 PTPRZ1P23471 2315 aaPredicted RBP6.19□□□□□ -1.42
CXXC4-202ENST00000466963 ARHGEF35A5YM69 484 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 K7ERI5 159 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 NFICP08651 508 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 HAPLN1P10915 354 aaPredicted RBP6.19□□□□□ -1.42
CXXC4-202ENST00000466963 IBSPP21815 317 aaPredicted RBP6.19□□□□□ -1.42
CXXC4-202ENST00000466963 GUCY2CP25092 1073 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 HNF1BP35680 557 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 GRIA2P42262 883 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 ZNF445P59923 1031 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 NTHL1P78549 312 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 MCL1Q07820 350 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 ALCAMQ13740 583 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 PON2Q15165 354 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 SDE2Q6IQ49 451 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 VSTM1Q6UX27 236 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 ZSCAN30Q86W11 494 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 FAM174AQ8TBP5 190 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 ASAP3Q8TDY4 903 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 ZFP42Q96MM3 310 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 ACO2Q99798 780 aaKnown RBP6.19□□□□□ -1.42
CXXC4-202ENST00000466963 PCDHB5Q9Y5E4 795 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 PCDH15Q96QU1 1955 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 A0A1B0GTW7 788 aa6.19□□□□□ -1.42
CXXC4-202ENST00000466963 LRRIQ4A6NIV6 560 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms