RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 EMILIN2Q9BXX0 1053 aa17.13■□□□□ 0.33
GPC1-207ENST00000466624 NSUN3Q9H649 340 aaKnown RBP17.13■□□□□ 0.33
GPC1-207ENST00000466624 RTN4Q9NQC3 1192 aaKnown RBP17.13■□□□□ 0.33
GPC1-207ENST00000466624 MTMR10Q9NXD2 777 aa17.13■□□□□ 0.33
GPC1-207ENST00000466624 POLIQ9UNA4 740 aa17.13■□□□□ 0.33
GPC1-207ENST00000466624 TIMM13Q9Y5L4 95 aaPredicted RBP17.13■□□□□ 0.33
GPC1-207ENST00000466624 MTCH2Q9Y6C9 303 aa17.13■□□□□ 0.33
GPC1-207ENST00000466624 MTCL1Q9Y4B5 1905 aaKnown RBP17.13■□□□□ 0.33
GPC1-207ENST00000466624 FSD2A1L4K1 749 aa17.12■□□□□ 0.33
GPC1-207ENST00000466624 OR6C75A6NL08 312 aa17.12■□□□□ 0.33
GPC1-207ENST00000466624 HIDE1A8MVS5 230 aa17.12■□□□□ 0.33
GPC1-207ENST00000466624 C2CD2LO14523 706 aa17.12■□□□□ 0.33
GPC1-207ENST00000466624 SERPINC1P01008 464 aa17.12■□□□□ 0.33
GPC1-207ENST00000466624 PON1P27169 355 aa17.12■□□□□ 0.33
GPC1-207ENST00000466624 NDUFV1P49821 464 aa17.12■□□□□ 0.33
GPC1-207ENST00000466624 FANCCQ00597 558 aa17.12■□□□□ 0.33
GPC1-207ENST00000466624 INCA1Q0VD86 236 aa17.12■□□□□ 0.33
GPC1-207ENST00000466624 CTXN3Q4LDR2 81 aa17.12■□□□□ 0.33
GPC1-207ENST00000466624 PRSS55Q6UWB4 352 aaPredicted RBP17.12■□□□□ 0.33
GPC1-207ENST00000466624 GAS2L3Q86XJ1 694 aa17.12■□□□□ 0.33
GPC1-207ENST00000466624 AUTS2Q8WXX7 1259 aa17.12■□□□□ 0.33
GPC1-207ENST00000466624 TATDN2Q93075 761 aa17.12■□□□□ 0.33
GPC1-207ENST00000466624 GUCD1Q96NT3 240 aa17.12■□□□□ 0.33
GPC1-207ENST00000466624 ERGIC2Q96RQ1 377 aa17.12■□□□□ 0.33
GPC1-207ENST00000466624 CDCA3Q99618 268 aaPredicted RBP17.12■□□□□ 0.33
GPC1-207ENST00000466624 CDX2Q99626 313 aaPredicted RBP17.12■□□□□ 0.33
GPC1-207ENST00000466624 CLSTN3Q9BQT9 956 aa17.12■□□□□ 0.33
GPC1-207ENST00000466624 ACBD6Q9BR61 282 aa17.12■□□□□ 0.33
GPC1-207ENST00000466624 CRACR2AQ9BSW2 395 aa17.12■□□□□ 0.33
GPC1-207ENST00000466624 SMYD3Q9H7B4 428 aa17.12■□□□□ 0.33
GPC1-207ENST00000466624 FBXL5Q9UKA1 691 aa17.12■□□□□ 0.33
GPC1-207ENST00000466624 DAAM1Q9Y4D1 1078 aa17.12■□□□□ 0.33
GPC1-207ENST00000466624 PRRC2BQ5JSZ5 2229 aaKnown RBP17.12■□□□□ 0.33
GPC1-207ENST00000466624 PLXNA3P51805 1871 aa17.12■□□□□ 0.33
GPC1-207ENST00000466624 ADH1AP07327 375 aa17.11■□□□□ 0.33
GPC1-207ENST00000466624 CNPP09543 421 aaKnown RBP17.11■□□□□ 0.33
GPC1-207ENST00000466624 SLC9A1P19634 815 aa17.11■□□□□ 0.33
GPC1-207ENST00000466624 RFX1P22670 979 aa17.11■□□□□ 0.33
GPC1-207ENST00000466624 PCSK1P29120 753 aa17.11■□□□□ 0.33
GPC1-207ENST00000466624 YWHAEP62258 255 aaKnown RBP17.11■□□□□ 0.33
GPC1-207ENST00000466624 UBXN1Q04323 297 aa17.11■□□□□ 0.33
GPC1-207ENST00000466624 KCNMA1Q12791 1236 aa17.11■□□□□ 0.33
GPC1-207ENST00000466624 CUL2Q13617 745 aa17.11■□□□□ 0.33
GPC1-207ENST00000466624 SCARA5Q6ZMJ2 495 aa17.11■□□□□ 0.33
GPC1-207ENST00000466624 ENOSF1Q7L5Y1 443 aa17.11■□□□□ 0.33
GPC1-207ENST00000466624 UNC93AQ86WB7 457 aa17.11■□□□□ 0.33
GPC1-207ENST00000466624 JAKMIP2Q96AA8 810 aa17.11■□□□□ 0.33
GPC1-207ENST00000466624 ELMO3Q96BJ8 720 aa17.11■□□□□ 0.33
GPC1-207ENST00000466624 KLHL5Q96PQ7 755 aa17.11■□□□□ 0.33
GPC1-207ENST00000466624 RTP3Q9BQQ7 232 aa17.11■□□□□ 0.33
GPC1-207ENST00000466624 RBSNQ9H1K0 784 aa17.11■□□□□ 0.33
GPC1-207ENST00000466624 PLCB1Q9NQ66 1216 aa17.11■□□□□ 0.33
GPC1-207ENST00000466624 DDX43Q9NXZ2 648 aaKnown RBP17.11■□□□□ 0.33
GPC1-207ENST00000466624 APEX2Q9UBZ4 518 aa17.11■□□□□ 0.33
GPC1-207ENST00000466624 PCDHGC5Q9Y5F6 944 aa17.11■□□□□ 0.33
GPC1-207ENST00000466624 TEX28O15482 410 aa17.1■□□□□ 0.33
GPC1-207ENST00000466624 CA8P35219 290 aa17.1■□□□□ 0.33
GPC1-207ENST00000466624 LRMPQ12912 555 aa17.1■□□□□ 0.33
GPC1-207ENST00000466624 NR1I3Q14994 352 aa17.1■□□□□ 0.33
GPC1-207ENST00000466624 PHLDB3Q6NSJ2 640 aa17.1■□□□□ 0.33
GPC1-207ENST00000466624 DPY19L2P1Q6NXN4 242 aa17.1■□□□□ 0.33
GPC1-207ENST00000466624 PPFIBP1Q86W92 1011 aa17.1■□□□□ 0.33
GPC1-207ENST00000466624 OSTM1Q86WC4 334 aa17.1■□□□□ 0.33
GPC1-207ENST00000466624 MRPL45Q9BRJ2 306 aaKnown RBP17.1■□□□□ 0.33
GPC1-207ENST00000466624 SDCBP2Q9H190 292 aa17.1■□□□□ 0.33
GPC1-207ENST00000466624 SNX25Q9H3E2 840 aa17.1■□□□□ 0.33
GPC1-207ENST00000466624 SIX2Q9NPC8 291 aa17.1■□□□□ 0.33
GPC1-207ENST00000466624 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.1■□□□□ 0.33
GPC1-207ENST00000466624 BARX2Q9UMQ3 279 aaPredicted RBP17.1■□□□□ 0.33
GPC1-207ENST00000466624 SIK3Q9Y2K2 1263 aa17.1■□□□□ 0.33
GPC1-207ENST00000466624 STXBP5LQ9Y2K9 1186 aa17.1■□□□□ 0.33
GPC1-207ENST00000466624 CDY1Q9Y6F8 540 aa17.1■□□□□ 0.33
GPC1-207ENST00000466624 SZT2Q5T011 3432 aa17.09■□□□□ 0.33
GPC1-207ENST00000466624 A0A1W2PQC6 194 aa17.09■□□□□ 0.33
GPC1-207ENST00000466624 WEE2P0C1S8 567 aa17.09■□□□□ 0.33
GPC1-207ENST00000466624 IGFBP4P22692 258 aa17.09■□□□□ 0.33
GPC1-207ENST00000466624 OR1D2P34982 312 aa17.09■□□□□ 0.33
GPC1-207ENST00000466624 GNL1P36915 607 aaPredicted RBP17.09■□□□□ 0.33
GPC1-207ENST00000466624 RAP1GAPP47736 663 aa17.09■□□□□ 0.33
GPC1-207ENST00000466624 CDH8P55286 799 aa17.09■□□□□ 0.33
GPC1-207ENST00000466624 UBASH3AP57075 661 aa17.09■□□□□ 0.33
GPC1-207ENST00000466624 SMARCB1Q12824 385 aa17.09■□□□□ 0.33
GPC1-207ENST00000466624 RAB33AQ14088 237 aa17.09■□□□□ 0.33
GPC1-207ENST00000466624 DUSP6Q16828 381 aa17.09■□□□□ 0.33
GPC1-207ENST00000466624 RSPO2Q6UXX9 243 aaPredicted RBP17.09■□□□□ 0.33
GPC1-207ENST00000466624 ADGRD2Q7Z7M1 963 aa17.09■□□□□ 0.33
GPC1-207ENST00000466624 ARHGEF19Q8IW93 802 aa17.09■□□□□ 0.33
GPC1-207ENST00000466624 PPM1KQ8N3J5 372 aa17.09■□□□□ 0.33
GPC1-207ENST00000466624 UBR7Q8N806 425 aa17.09■□□□□ 0.33
GPC1-207ENST00000466624 OR6B3Q8NGW1 331 aa17.09■□□□□ 0.33
GPC1-207ENST00000466624 OR10T2Q8NGX3 314 aa17.09■□□□□ 0.33
GPC1-207ENST00000466624 MYLIPQ8WY64 445 aa17.09■□□□□ 0.33
GPC1-207ENST00000466624 NAP1L5Q96NT1 182 aaPredicted RBP17.09■□□□□ 0.33
GPC1-207ENST00000466624 ZCWPW1Q9H0M4 648 aa17.09■□□□□ 0.33
GPC1-207ENST00000466624 CDH9Q9ULB4 789 aa17.09■□□□□ 0.33
GPC1-207ENST00000466624 MAFFQ9ULX9 164 aa17.09■□□□□ 0.33
GPC1-207ENST00000466624 PTPRDP23468 1912 aa17.09■□□□□ 0.33
GPC1-207ENST00000466624 A8MXQ7 604 aa17.08■□□□□ 0.32
GPC1-207ENST00000466624 TEX33O43247 280 aa17.08■□□□□ 0.32
GPC1-207ENST00000466624 CBFA2T2O43439 604 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms