RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 MUTP22033 750 aa15.75■□□□□ 0.11
CXCR4-203ENST00000466288 MCM2P49736 904 aa15.75■□□□□ 0.11
CXCR4-203ENST00000466288 PTPAQ15257 358 aa15.75■□□□□ 0.11
CXCR4-203ENST00000466288 ARHGAP15Q53QZ3 475 aa15.75■□□□□ 0.11
CXCR4-203ENST00000466288 SH3PXD2AQ5TCZ1 1133 aa15.75■□□□□ 0.11
CXCR4-203ENST00000466288 DAB2IPQ5VWQ8 1189 aa15.75■□□□□ 0.11
CXCR4-203ENST00000466288 MPZL3Q6UWV2 235 aa15.75■□□□□ 0.11
CXCR4-203ENST00000466288 DAW1Q8N136 415 aa15.75■□□□□ 0.11
CXCR4-203ENST00000466288 ERMNQ8TAM6 284 aa15.75■□□□□ 0.11
CXCR4-203ENST00000466288 ZBTB45Q96K62 511 aaPredicted RBP15.75■□□□□ 0.11
CXCR4-203ENST00000466288 HHIPQ96QV1 700 aa15.75■□□□□ 0.11
CXCR4-203ENST00000466288 TCHPQ9BT92 498 aa15.75■□□□□ 0.11
CXCR4-203ENST00000466288 SMG9Q9H0W8 520 aaKnown RBP15.75■□□□□ 0.11
CXCR4-203ENST00000466288 TASP1Q9H6P5 420 aa15.75■□□□□ 0.11
CXCR4-203ENST00000466288 IL21Q9HBE4 155 aa15.75■□□□□ 0.11
CXCR4-203ENST00000466288 FBRSL1Q9HCM7 1045 aaKnown RBP15.75■□□□□ 0.11
CXCR4-203ENST00000466288 HPS4Q9NQG7 708 aa15.75■□□□□ 0.11
CXCR4-203ENST00000466288 GKN1Q9NS71 199 aa15.75■□□□□ 0.11
CXCR4-203ENST00000466288 DCLK1O15075 740 aa15.74■□□□□ 0.11
CXCR4-203ENST00000466288 EGFP01133 1207 aa15.74■□□□□ 0.11
CXCR4-203ENST00000466288 HARSP12081 509 aaKnown RBP15.74■□□□□ 0.11
CXCR4-203ENST00000466288 LRPAP1P30533 357 aa15.74■□□□□ 0.11
CXCR4-203ENST00000466288 CYP4F8P98187 520 aa15.74■□□□□ 0.11
CXCR4-203ENST00000466288 CREB5Q02930 508 aa15.74■□□□□ 0.11
CXCR4-203ENST00000466288 RUNX3Q13761 415 aa15.74■□□□□ 0.11
CXCR4-203ENST00000466288 ELF2Q15723 593 aa15.74■□□□□ 0.11
CXCR4-203ENST00000466288 SEZ6Q53EL9 994 aa15.74■□□□□ 0.11
CXCR4-203ENST00000466288 SLC46A2Q9BY10 475 aa15.74■□□□□ 0.11
CXCR4-203ENST00000466288 THG1LQ9NWX6 298 aaKnown RBP15.74■□□□□ 0.11
CXCR4-203ENST00000466288 PKD1L2Q7Z442 2459 aa15.74■□□□□ 0.11
CXCR4-203ENST00000466288 SPAG17Q6Q759 2223 aa15.74■□□□□ 0.11
CXCR4-203ENST00000466288 RHOBTB1O94844 696 aa15.73■□□□□ 0.11
CXCR4-203ENST00000466288 CEACAM1P13688 526 aa15.73■□□□□ 0.11
CXCR4-203ENST00000466288 MYBPC2Q14324 1141 aa15.73■□□□□ 0.11
CXCR4-203ENST00000466288 ZBTB6Q15916 424 aa15.73■□□□□ 0.11
CXCR4-203ENST00000466288 TRIM68Q6AZZ1 485 aa15.73■□□□□ 0.11
CXCR4-203ENST00000466288 LRSAM1Q6UWE0 723 aa15.73■□□□□ 0.11
CXCR4-203ENST00000466288 LPIN3Q9BQK8 851 aa15.73■□□□□ 0.11
CXCR4-203ENST00000466288 SCNM1Q9BWG6 230 aa15.73■□□□□ 0.11
CXCR4-203ENST00000466288 CDX4O14627 284 aaPredicted RBP15.72■□□□□ 0.11
CXCR4-203ENST00000466288 LARGE1O95461 756 aa15.72■□□□□ 0.11
CXCR4-203ENST00000466288 CSRP1P21291 193 aaKnown RBP15.72■□□□□ 0.11
CXCR4-203ENST00000466288 RING1Q06587 406 aa15.72■□□□□ 0.11
CXCR4-203ENST00000466288 SPAG1Q07617 926 aa15.72■□□□□ 0.11
CXCR4-203ENST00000466288 DMP1Q13316 513 aaPredicted RBP15.72■□□□□ 0.11
CXCR4-203ENST00000466288 KARSQ15046 597 aaKnown RBP15.72■□□□□ 0.11
CXCR4-203ENST00000466288 HAUS3Q68CZ6 603 aa15.72■□□□□ 0.11
CXCR4-203ENST00000466288 USP37Q86T82 979 aa15.72■□□□□ 0.11
CXCR4-203ENST00000466288 ITIH5Q86UX2 942 aa15.72■□□□□ 0.11
CXCR4-203ENST00000466288 EBF3Q9H4W6 596 aa15.72■□□□□ 0.11
CXCR4-203ENST00000466288 KMT5AQ9NQR1 393 aa15.72■□□□□ 0.11
CXCR4-203ENST00000466288 HSFX1Q9UBD0 423 aa15.72■□□□□ 0.11
CXCR4-203ENST00000466288 EBF1Q9UH73 591 aa15.72■□□□□ 0.11
CXCR4-203ENST00000466288 TOM1L1O75674 476 aa15.71■□□□□ 0.11
CXCR4-203ENST00000466288 OR52Z1P0C646 297 aa15.71■□□□□ 0.11
CXCR4-203ENST00000466288 TYMPP19971 482 aa15.71■□□□□ 0.11
CXCR4-203ENST00000466288 CDC25CP30307 473 aa15.71■□□□□ 0.11
CXCR4-203ENST00000466288 CCT6AP40227 531 aaKnown RBP15.71■□□□□ 0.11
CXCR4-203ENST00000466288 GALK1P51570 392 aa15.71■□□□□ 0.11
CXCR4-203ENST00000466288 NOLC1Q14978 699 aaKnown RBP eCLIP15.71■□□□□ 0.11
CXCR4-203ENST00000466288 OVOS1Q6IE37 1185 aa15.71■□□□□ 0.11
CXCR4-203ENST00000466288 SYT13Q7L8C5 426 aa15.71■□□□□ 0.11
CXCR4-203ENST00000466288 CMTM8Q8IZV2 173 aa15.71■□□□□ 0.11
CXCR4-203ENST00000466288 NECAB1Q8N987 351 aa15.71■□□□□ 0.11
CXCR4-203ENST00000466288 KIAA1024Q9UPX6 916 aa15.71■□□□□ 0.11
CXCR4-203ENST00000466288 CCL26Q9Y258 94 aa15.71■□□□□ 0.11
CXCR4-203ENST00000466288 TTC26A0AVF1 554 aa15.71■□□□□ 0.1
CXCR4-203ENST00000466288 SOBPA7XYQ1 873 aa15.71■□□□□ 0.1
CXCR4-203ENST00000466288 HIP1RO75146 1068 aa15.71■□□□□ 0.1
CXCR4-203ENST00000466288 CXCL8P10145 99 aa15.71■□□□□ 0.1
CXCR4-203ENST00000466288 ATF6P18850 670 aa15.71■□□□□ 0.1
CXCR4-203ENST00000466288 DRD1P21728 446 aa15.71■□□□□ 0.1
CXCR4-203ENST00000466288 FOSBP53539 338 aa15.71■□□□□ 0.1
CXCR4-203ENST00000466288 MAPK7Q13164 816 aa15.71■□□□□ 0.1
CXCR4-203ENST00000466288 NAIF1Q69YI7 327 aaPredicted RBP15.71■□□□□ 0.1
CXCR4-203ENST00000466288 DSTYKQ6XUX3 929 aa15.71■□□□□ 0.1
CXCR4-203ENST00000466288 RPLP0P6Q8NHW5 317 aa15.71■□□□□ 0.1
CXCR4-203ENST00000466288 RIN3Q8TB24 985 aa15.71■□□□□ 0.1
CXCR4-203ENST00000466288 EZH1Q92800 747 aaPredicted RBP15.71■□□□□ 0.1
CXCR4-203ENST00000466288 PLEKHA5Q9HAU0 1116 aa15.71■□□□□ 0.1
CXCR4-203ENST00000466288 TMEM9BQ9NQ34 198 aa15.71■□□□□ 0.1
CXCR4-203ENST00000466288 ANKFY1Q9P2R3 1169 aa15.71■□□□□ 0.1
CXCR4-203ENST00000466288 NUP210Q8TEM1 1887 aaPredicted RBP15.71■□□□□ 0.1
CXCR4-203ENST00000466288 KHNYNO15037 678 aaKnown RBP15.7■□□□□ 0.1
CXCR4-203ENST00000466288 SLC16A4O15374 487 aa15.7■□□□□ 0.1
CXCR4-203ENST00000466288 APBB3O95704 486 aa15.7■□□□□ 0.1
CXCR4-203ENST00000466288 ARSAP15289 507 aa15.7■□□□□ 0.1
CXCR4-203ENST00000466288 CYP3A5P20815 502 aa15.7■□□□□ 0.1
CXCR4-203ENST00000466288 GUCY2FP51841 1108 aa15.7■□□□□ 0.1
CXCR4-203ENST00000466288 MCL1Q07820 350 aa15.7■□□□□ 0.1
CXCR4-203ENST00000466288 ZNF174Q15697 407 aa15.7■□□□□ 0.1
CXCR4-203ENST00000466288 FBXO43Q4G163 708 aa15.7■□□□□ 0.1
CXCR4-203ENST00000466288 PMS2CLQ68D20 193 aa15.7■□□□□ 0.1
CXCR4-203ENST00000466288 NSUN7Q8NE18 718 aaKnown RBP15.7■□□□□ 0.1
CXCR4-203ENST00000466288 OR10T2Q8NGX3 314 aa15.7■□□□□ 0.1
CXCR4-203ENST00000466288 ZCCHC14Q8WYQ9 949 aaKnown RBP15.7■□□□□ 0.1
CXCR4-203ENST00000466288 USP13Q92995 863 aaPredicted RBP15.7■□□□□ 0.1
CXCR4-203ENST00000466288 KIF12Q96FN5 646 aa15.7■□□□□ 0.1
CXCR4-203ENST00000466288 NTPCRQ9BSD7 190 aaKnown RBP15.7■□□□□ 0.1
CXCR4-203ENST00000466288 BACH2Q9BYV9 841 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms