RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 GABRR2P28476 465 aa22.31■■□□□ 1.16
COL6A1-203ENST00000466285 LONP1P36776 959 aaKnown RBP22.31■■□□□ 1.16
COL6A1-203ENST00000466285 MYBPC2Q14324 1141 aa22.31■■□□□ 1.16
COL6A1-203ENST00000466285 LPAL2Q16609 132 aa22.31■■□□□ 1.16
COL6A1-203ENST00000466285 DNAJB7Q7Z6W7 309 aaPredicted RBP22.31■■□□□ 1.16
COL6A1-203ENST00000466285 ARID3BQ8IVW6 561 aaPredicted RBP22.31■■□□□ 1.16
COL6A1-203ENST00000466285 LEMD2Q8NC56 503 aa22.31■■□□□ 1.16
COL6A1-203ENST00000466285 RASSF8Q8NHQ8 419 aa22.31■■□□□ 1.16
COL6A1-203ENST00000466285 PSMG2Q969U7 264 aa22.31■■□□□ 1.16
COL6A1-203ENST00000466285 BORCS6Q96GS4 357 aa22.31■■□□□ 1.16
COL6A1-203ENST00000466285 CLIC6Q96NY7 704 aa22.31■■□□□ 1.16
COL6A1-203ENST00000466285 NELL2Q99435 816 aa22.31■■□□□ 1.16
COL6A1-203ENST00000466285 SEPT5Q99719 369 aaPredicted RBP22.31■■□□□ 1.16
COL6A1-203ENST00000466285 LMAN1LQ9HAT1 526 aa22.31■■□□□ 1.16
COL6A1-203ENST00000466285 PARD6AQ9NPB6 346 aa22.31■■□□□ 1.16
COL6A1-203ENST00000466285 TRPV5Q9NQA5 729 aa22.31■■□□□ 1.16
COL6A1-203ENST00000466285 KCNG1Q9UIX4 513 aa22.31■■□□□ 1.16
COL6A1-203ENST00000466285 FBXO2Q9UK22 296 aaPredicted RBP22.31■■□□□ 1.16
COL6A1-203ENST00000466285 SPTBN2O15020 2390 aa22.31■■□□□ 1.16
COL6A1-203ENST00000466285 VPS37CA5D8V6 355 aaPredicted RBP22.3■■□□□ 1.16
COL6A1-203ENST00000466285 SLC26A4O43511 780 aa22.3■■□□□ 1.16
COL6A1-203ENST00000466285 CYP11A1P05108 521 aa22.3■■□□□ 1.16
COL6A1-203ENST00000466285 TGM1P22735 817 aa22.3■■□□□ 1.16
COL6A1-203ENST00000466285 CASP5P51878 434 aa22.3■■□□□ 1.16
COL6A1-203ENST00000466285 EPHB3P54753 998 aa22.3■■□□□ 1.16
COL6A1-203ENST00000466285 FOXK2Q01167 660 aa22.3■■□□□ 1.16
COL6A1-203ENST00000466285 FCHO2Q0JRZ9 810 aa22.3■■□□□ 1.16
COL6A1-203ENST00000466285 PLD1Q13393 1074 aa22.3■■□□□ 1.16
COL6A1-203ENST00000466285 WSCD1Q658N2 575 aa22.3■■□□□ 1.16
COL6A1-203ENST00000466285 ADALQ6DHV7 355 aa22.3■■□□□ 1.16
COL6A1-203ENST00000466285 RIN3Q8TB24 985 aa22.3■■□□□ 1.16
COL6A1-203ENST00000466285 ATRIPQ8WXE1 791 aa22.3■■□□□ 1.16
COL6A1-203ENST00000466285 ZCWPW1Q9H0M4 648 aa22.3■■□□□ 1.16
COL6A1-203ENST00000466285 TMLHEQ9NVH6 421 aa22.3■■□□□ 1.16
COL6A1-203ENST00000466285 TBC1D7Q9P0N9 293 aa22.3■■□□□ 1.16
COL6A1-203ENST00000466285 NCDNQ9UBB6 729 aa22.3■■□□□ 1.16
COL6A1-203ENST00000466285 MRPS17Q9Y2R5 130 aaKnown RBP22.3■■□□□ 1.16
COL6A1-203ENST00000466285 STYXL1Q9Y6J8 313 aa22.3■■□□□ 1.16
COL6A1-203ENST00000466285 MYO16Q9Y6X6 1858 aa22.29■■□□□ 1.16
COL6A1-203ENST00000466285 A0A087X0B3 334 aa22.29■■□□□ 1.16
COL6A1-203ENST00000466285 MYMKA6NI61 221 aa22.29■■□□□ 1.16
COL6A1-203ENST00000466285 XPOTO43592 962 aaKnown RBP22.29■■□□□ 1.16
COL6A1-203ENST00000466285 GPR15P49685 360 aa22.29■■□□□ 1.16
COL6A1-203ENST00000466285 TNK2Q07912 1038 aa22.29■■□□□ 1.16
COL6A1-203ENST00000466285 SRSF5Q13243 272 aaKnown RBP22.29■■□□□ 1.16
COL6A1-203ENST00000466285 RSPO4Q2I0M5 234 aaPredicted RBP22.29■■□□□ 1.16
COL6A1-203ENST00000466285 GPR158Q5T848 1215 aa22.29■■□□□ 1.16
COL6A1-203ENST00000466285 BRAPQ7Z569 592 aa22.29■■□□□ 1.16
COL6A1-203ENST00000466285 GIPC2Q8TF65 315 aa22.29■■□□□ 1.16
COL6A1-203ENST00000466285 PYM1Q9BRP8 204 aaKnown RBP22.29■■□□□ 1.16
COL6A1-203ENST00000466285 STRA6Q9BX79 667 aa22.29■■□□□ 1.16
COL6A1-203ENST00000466285 CCSER1Q9C0I3 900 aa22.29■■□□□ 1.16
COL6A1-203ENST00000466285 ATXN3LQ9H3M9 355 aa22.29■■□□□ 1.16
COL6A1-203ENST00000466285 DLL3Q9NYJ7 618 aa22.29■■□□□ 1.16
COL6A1-203ENST00000466285 GTSE1Q9NYZ3 720 aa22.29■■□□□ 1.16
COL6A1-203ENST00000466285 AGO2Q9UKV8 859 aaKnown RBP22.29■■□□□ 1.16
COL6A1-203ENST00000466285 ATG2BQ96BY7 2078 aa22.28■■□□□ 1.16
COL6A1-203ENST00000466285 MAN2B1O00754 1011 aa22.28■■□□□ 1.16
COL6A1-203ENST00000466285 NCAM2O15394 837 aa22.28■■□□□ 1.16
COL6A1-203ENST00000466285 HCRTO43612 131 aa22.28■■□□□ 1.16
COL6A1-203ENST00000466285 ALDH1A3P47895 512 aa22.28■■□□□ 1.16
COL6A1-203ENST00000466285 RESTQ13127 1097 aa22.28■■□□□ 1.16
COL6A1-203ENST00000466285 KYAT1Q16773 422 aa22.28■■□□□ 1.16
COL6A1-203ENST00000466285 TMEM150AQ86TG1 271 aa22.28■■□□□ 1.16
COL6A1-203ENST00000466285 DNAJC19Q96DA6 116 aa22.28■■□□□ 1.16
COL6A1-203ENST00000466285 CHFRQ96EP1 664 aa22.28■■□□□ 1.16
COL6A1-203ENST00000466285 SAAL1Q96ER3 474 aa22.28■■□□□ 1.16
COL6A1-203ENST00000466285 ST6GALNAC4Q9H4F1 302 aa22.28■■□□□ 1.16
COL6A1-203ENST00000466285 DPP3Q9NY33 737 aa22.28■■□□□ 1.16
COL6A1-203ENST00000466285 KIAA1549LQ6ZVL6 1849 aa22.28■■□□□ 1.16
COL6A1-203ENST00000466285 EML5Q05BV3 1969 aa22.28■■□□□ 1.16
COL6A1-203ENST00000466285 CYB561D2O14569 222 aa22.27■■□□□ 1.16
COL6A1-203ENST00000466285 MGAT5BQ3V5L5 792 aa22.27■■□□□ 1.16
COL6A1-203ENST00000466285 SDHAF4Q5VUM1 108 aa22.27■■□□□ 1.16
COL6A1-203ENST00000466285 ZNF720Q7Z2F6 126 aa22.27■■□□□ 1.16
COL6A1-203ENST00000466285 DGLUCYQ7Z3D6 616 aa22.27■■□□□ 1.16
COL6A1-203ENST00000466285 OXCT2Q9BYC2 517 aaPredicted RBP22.27■■□□□ 1.16
COL6A1-203ENST00000466285 DERAQ9Y315 318 aa22.27■■□□□ 1.16
COL6A1-203ENST00000466285 C2CD2Q9Y426 696 aa22.27■■□□□ 1.16
COL6A1-203ENST00000466285 ANAPC1Q9H1A4 1944 aa22.27■■□□□ 1.16
COL6A1-203ENST00000466285 GREB1Q4ZG55 1949 aa22.26■■□□□ 1.15
COL6A1-203ENST00000466285 SPECC1L-ADORA2AF8WAN1 911 aa22.26■■□□□ 1.15
COL6A1-203ENST00000466285 CHADO15335 359 aa22.26■■□□□ 1.15
COL6A1-203ENST00000466285 CTHP32929 405 aa22.26■■□□□ 1.15
COL6A1-203ENST00000466285 TAF6P49848 677 aa22.26■■□□□ 1.15
COL6A1-203ENST00000466285 CEBPZQ03701 1054 aaKnown RBP22.26■■□□□ 1.15
COL6A1-203ENST00000466285 CUL4AQ13619 759 aa22.26■■□□□ 1.15
COL6A1-203ENST00000466285 PKN3Q6P5Z2 889 aa22.26■■□□□ 1.15
COL6A1-203ENST00000466285 CD302Q8IX05 232 aa22.26■■□□□ 1.15
COL6A1-203ENST00000466285 ABI2Q9NYB9 513 aaPredicted RBP22.26■■□□□ 1.15
COL6A1-203ENST00000466285 CCL26Q9Y258 94 aa22.26■■□□□ 1.15
COL6A1-203ENST00000466285 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.26■■□□□ 1.15
COL6A1-203ENST00000466285 K7ESF4 209 aa22.25■■□□□ 1.15
COL6A1-203ENST00000466285 DDIT3P35638 169 aa22.25■■□□□ 1.15
COL6A1-203ENST00000466285 ARMCX5Q6P1M9 558 aa22.25■■□□□ 1.15
COL6A1-203ENST00000466285 YAF2Q8IY57 180 aa22.25■■□□□ 1.15
COL6A1-203ENST00000466285 GLIS3Q8NEA6 775 aa22.25■■□□□ 1.15
COL6A1-203ENST00000466285 CXorf38Q8TB03 319 aa22.25■■□□□ 1.15
COL6A1-203ENST00000466285 FAM200AQ8TCP9 573 aa22.25■■□□□ 1.15
COL6A1-203ENST00000466285 CSGALNACT1Q8TDX6 532 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms