RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 STX2P32856 288 aa17.3■□□□□ 0.36
SLX4-202ENST00000466154 OGDHQ02218 1023 aa17.3■□□□□ 0.36
SLX4-202ENST00000466154 FASTKD3Q14CZ7 662 aaKnown RBP17.3■□□□□ 0.36
SLX4-202ENST00000466154 DUOXA2Q1HG44 320 aa17.3■□□□□ 0.36
SLX4-202ENST00000466154 ANKRD20A8PQ5CZ79 823 aa17.3■□□□□ 0.36
SLX4-202ENST00000466154 C6orf89Q6UWU4 347 aa17.3■□□□□ 0.36
SLX4-202ENST00000466154 FAM47EQ6ZV65 393 aa17.3■□□□□ 0.36
SLX4-202ENST00000466154 CEP83Q9Y592 693 aa17.3■□□□□ 0.36
SLX4-202ENST00000466154 PSTPIP1O43586 416 aa17.29■□□□□ 0.36
SLX4-202ENST00000466154 GTF2A1P52655 376 aaPredicted RBP17.29■□□□□ 0.36
SLX4-202ENST00000466154 R3HDM1Q15032 1099 aaKnown RBP17.29■□□□□ 0.36
SLX4-202ENST00000466154 TMEM35BQ8NCS4 154 aa17.29■□□□□ 0.36
SLX4-202ENST00000466154 SPATC1LQ9H0A9 340 aa17.29■□□□□ 0.36
SLX4-202ENST00000466154 TOM1L1O75674 476 aa17.29■□□□□ 0.36
SLX4-202ENST00000466154 PAEPP09466 180 aa17.29■□□□□ 0.36
SLX4-202ENST00000466154 CXCL8P10145 99 aa17.29■□□□□ 0.36
SLX4-202ENST00000466154 PSMA2P25787 234 aa17.29■□□□□ 0.36
SLX4-202ENST00000466154 TRIM72Q6ZMU5 477 aa17.29■□□□□ 0.36
SLX4-202ENST00000466154 SPATA33Q96N06 139 aa17.29■□□□□ 0.36
SLX4-202ENST00000466154 ZNF317Q96PQ6 595 aaPredicted RBP17.29■□□□□ 0.36
SLX4-202ENST00000466154 CD248Q9HCU0 757 aa17.29■□□□□ 0.36
SLX4-202ENST00000466154 SLC40A1Q9NP59 571 aa17.29■□□□□ 0.36
SLX4-202ENST00000466154 EXOC1LA0A1B0GW35 172 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 FZD9O00144 591 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 IRF6O14896 467 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 USP2O75604 605 aaPredicted RBP17.28■□□□□ 0.36
SLX4-202ENST00000466154 STAM2O75886 525 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 MAN1A1P33908 653 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 SCTRP47872 440 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 CCNG2Q16589 344 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 PLEKHA7Q6IQ23 1121 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 NLGN2Q8NFZ4 835 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 CLMNQ96JQ2 1002 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 C12orf42Q96LP6 360 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 NAALADL1Q9UQQ1 740 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 TNS1Q9HBL0 1735 aaKnown RBP17.28■□□□□ 0.36
SLX4-202ENST00000466154 ZNFX1Q9P2E3 1918 aaKnown RBP17.28■□□□□ 0.36
SLX4-202ENST00000466154 RASA4BC9J798 803 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 RASA4O43374 803 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 FSBPO95073 299 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 KRT15P19012 456 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 MAGEA4P43358 317 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 NEDD9Q14511 834 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 EEF1DP3Q658K8 133 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 BRSK2Q8IWQ3 736 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 ZBED8Q8IZ13 594 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 CHST13Q8NET6 341 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 DNERQ8NFT8 737 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 KCNG1Q9UIX4 513 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 NEU2Q9Y3R4 380 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 CPP00450 1065 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 MMP8P22894 467 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 DENND1BQ6P3S1 775 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 CEP57Q86XR8 500 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 EXD1Q8NHP7 514 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 HSPH1Q92598 858 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 SLITRK1Q96PX8 696 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 CCDC77Q9BR77 488 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 NIF3L1Q9GZT8 377 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 KIF9Q9HAQ2 790 aa17.28■□□□□ 0.36
SLX4-202ENST00000466154 DDNO94850 711 aaPredicted RBP17.27■□□□□ 0.36
SLX4-202ENST00000466154 TJP3O95049 919 aa17.27■□□□□ 0.36
SLX4-202ENST00000466154 ASS1P00966 412 aaKnown RBP17.27■□□□□ 0.36
SLX4-202ENST00000466154 CLDN10P78369 228 aa17.27■□□□□ 0.36
SLX4-202ENST00000466154 C1QBPQ07021 282 aaKnown RBP17.27■□□□□ 0.36
SLX4-202ENST00000466154 KLF1Q13351 362 aaPredicted RBP17.27■□□□□ 0.36
SLX4-202ENST00000466154 PNMA8AQ86V59 439 aaPredicted RBP17.27■□□□□ 0.36
SLX4-202ENST00000466154 PHF13Q86YI8 300 aaPredicted RBP17.27■□□□□ 0.36
SLX4-202ENST00000466154 KATNAL2Q8IYT4 538 aa17.27■□□□□ 0.36
SLX4-202ENST00000466154 C4orf33Q8N1A6 199 aa17.27■□□□□ 0.36
SLX4-202ENST00000466154 PPP1R13LQ8WUF5 828 aa17.27■□□□□ 0.36
SLX4-202ENST00000466154 NSRP1Q9H0G5 558 aaKnown RBP17.27■□□□□ 0.36
SLX4-202ENST00000466154 ABCF3Q9NUQ8 709 aa17.27■□□□□ 0.36
SLX4-202ENST00000466154 GPRC5DQ9NZD1 345 aa17.27■□□□□ 0.36
SLX4-202ENST00000466154 STYXL1Q9Y6J8 313 aa17.27■□□□□ 0.36
SLX4-202ENST00000466154 MSCO60682 206 aa17.27■□□□□ 0.36
SLX4-202ENST00000466154 TNNC2P02585 160 aa17.27■□□□□ 0.36
SLX4-202ENST00000466154 RFC1P35251 1148 aaPredicted RBP17.27■□□□□ 0.36
SLX4-202ENST00000466154 RFC5P40937 340 aa17.27■□□□□ 0.36
SLX4-202ENST00000466154 NRLP54845 237 aa17.27■□□□□ 0.36
SLX4-202ENST00000466154 ZNF252P-AS1Q0IIN9 211 aa17.27■□□□□ 0.36
SLX4-202ENST00000466154 MPP2Q14168 576 aa17.27■□□□□ 0.36
SLX4-202ENST00000466154 ICE2Q659A1 982 aa17.27■□□□□ 0.36
SLX4-202ENST00000466154 RHBDF2Q6PJF5 856 aa17.27■□□□□ 0.36
SLX4-202ENST00000466154 LBX2Q6XYB7 198 aa17.27■□□□□ 0.36
SLX4-202ENST00000466154 NKIRAS1Q9NYS0 192 aa17.27■□□□□ 0.36
SLX4-202ENST00000466154 SNCAIPQ9Y6H5 919 aa17.27■□□□□ 0.36
SLX4-202ENST00000466154 OGTO15294 1046 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 PECAM1P16284 738 aaPredicted RBP17.26■□□□□ 0.35
SLX4-202ENST00000466154 PTP4A2Q12974 167 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 CROCCP2Q86T23 111 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 TBC1D1Q86TI0 1168 aaPredicted RBP17.26■□□□□ 0.35
SLX4-202ENST00000466154 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.26■□□□□ 0.35
SLX4-202ENST00000466154 JOSD2Q8TAC2 188 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 TCP11Q8WWU5 503 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 ACO2Q99798 780 aaKnown RBP17.26■□□□□ 0.35
SLX4-202ENST00000466154 CALN1Q9BXU9 219 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 KLC4Q9NSK0 619 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 RNF19AQ9NV58 838 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 TMEM191CA6NGB0 347 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms