RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 LLPHQ9BRT6 129 aaKnown RBP10.65□□□□□ -0.7
USP39-212ENST00000465514 BHMT2Q9H2M3 363 aa10.65□□□□□ -0.7
USP39-212ENST00000465514 CCDC86Q9H6F5 360 aaKnown RBP10.65□□□□□ -0.7
USP39-212ENST00000465514 CYP4F11Q9HBI6 524 aa10.65□□□□□ -0.7
USP39-212ENST00000465514 LRWD1Q9UFC0 647 aa10.65□□□□□ -0.7
USP39-212ENST00000465514 KIAA1024Q9UPX6 916 aa10.65□□□□□ -0.7
USP39-212ENST00000465514 RAXQ9Y2V3 346 aa10.65□□□□□ -0.7
USP39-212ENST00000465514 BACE2Q9Y5Z0 518 aa10.65□□□□□ -0.7
USP39-212ENST00000465514 SPTA1P02549 2419 aa10.65□□□□□ -0.71
USP39-212ENST00000465514 MYH11P35749 1972 aa10.65□□□□□ -0.71
USP39-212ENST00000465514 TMEM189-UBE2V1I3L0A0 370 aa10.64□□□□□ -0.71
USP39-212ENST00000465514 I3L4J1 428 aa10.64□□□□□ -0.71
USP39-212ENST00000465514 K7ERI5 159 aa10.64□□□□□ -0.71
USP39-212ENST00000465514 MEFVO15553 781 aaPredicted RBP10.64□□□□□ -0.71
USP39-212ENST00000465514 EIF5BO60841 1220 aaKnown RBP10.64□□□□□ -0.71
USP39-212ENST00000465514 ATG13O75143 517 aa10.64□□□□□ -0.71
USP39-212ENST00000465514 C1QL1O75973 258 aa10.64□□□□□ -0.71
USP39-212ENST00000465514 B3GAT3O94766 335 aa10.64□□□□□ -0.71
USP39-212ENST00000465514 ABLIM3O94929 683 aa10.64□□□□□ -0.71
USP39-212ENST00000465514 PLA2G2AP14555 144 aa10.64□□□□□ -0.71
USP39-212ENST00000465514 CLCNKBP51801 687 aa10.64□□□□□ -0.71
USP39-212ENST00000465514 ARPP19P56211 112 aa10.64□□□□□ -0.71
USP39-212ENST00000465514 GNL2Q13823 731 aaKnown RBP10.64□□□□□ -0.71
USP39-212ENST00000465514 NBR1Q14596 966 aa10.64□□□□□ -0.71
USP39-212ENST00000465514 PMS2CLQ68D20 193 aa10.64□□□□□ -0.71
USP39-212ENST00000465514 IQCEQ6IPM2 695 aa10.64□□□□□ -0.71
USP39-212ENST00000465514 SLC8B1Q6J4K2 584 aa10.64□□□□□ -0.71
USP39-212ENST00000465514 CD300LGQ6UXG3 332 aa10.64□□□□□ -0.71
USP39-212ENST00000465514 ANKS3Q6ZW76 656 aa10.64□□□□□ -0.71
USP39-212ENST00000465514 RAB44Q7Z6P3 723 aaPredicted RBP10.64□□□□□ -0.71
USP39-212ENST00000465514 PIP4P1Q86T03 277 aa10.64□□□□□ -0.71
USP39-212ENST00000465514 TCEAL8Q8IYN2 117 aa10.64□□□□□ -0.71
USP39-212ENST00000465514 FBXO18Q8NFZ0 1043 aa10.64□□□□□ -0.71
USP39-212ENST00000465514 SHKBP1Q8TBC3 707 aa10.64□□□□□ -0.71
USP39-212ENST00000465514 LRRC3BQ96PB8 259 aa10.64□□□□□ -0.71
USP39-212ENST00000465514 SCUBE2Q9NQ36 999 aa10.64□□□□□ -0.71
USP39-212ENST00000465514 ASAH2Q9NR71 780 aa10.64□□□□□ -0.71
USP39-212ENST00000465514 CEP72Q9P209 647 aa10.64□□□□□ -0.71
USP39-212ENST00000465514 INVSQ9Y283 1065 aa10.64□□□□□ -0.71
USP39-212ENST00000465514 SMIM28A0A1B0GU29 152 aa10.63□□□□□ -0.71
USP39-212ENST00000465514 CCDC169A6NNP5 214 aa10.63□□□□□ -0.71
USP39-212ENST00000465514 RNF40O75150 1001 aa10.63□□□□□ -0.71
USP39-212ENST00000465514 ATF2P15336 505 aa10.63□□□□□ -0.71
USP39-212ENST00000465514 RDXP35241 583 aaKnown RBP10.63□□□□□ -0.71
USP39-212ENST00000465514 TRAPPC10P48553 1259 aa10.63□□□□□ -0.71
USP39-212ENST00000465514 EPHA5P54756 1037 aa10.63□□□□□ -0.71
USP39-212ENST00000465514 FAM193AP78312 1265 aa10.63□□□□□ -0.71
USP39-212ENST00000465514 TWF1Q12792 350 aa10.63□□□□□ -0.71
USP39-212ENST00000465514 PDIA5Q14554 519 aa10.63□□□□□ -0.71
USP39-212ENST00000465514 UPP1Q16831 310 aa10.63□□□□□ -0.71
USP39-212ENST00000465514 ARHGAP29Q52LW3 1261 aa10.63□□□□□ -0.71
USP39-212ENST00000465514 STXBP5Q5T5C0 1151 aa10.63□□□□□ -0.71
USP39-212ENST00000465514 LARP1BQ659C4 914 aaKnown RBP10.63□□□□□ -0.71
USP39-212ENST00000465514 FSTL4Q6MZW2 842 aa10.63□□□□□ -0.71
USP39-212ENST00000465514 HAUS6Q7Z4H7 955 aa10.63□□□□□ -0.71
USP39-212ENST00000465514 APBB1IPQ7Z5R6 666 aaPredicted RBP10.63□□□□□ -0.71
USP39-212ENST00000465514 LURAP1LQ8IV03 231 aa10.63□□□□□ -0.71
USP39-212ENST00000465514 MDM1Q8TC05 714 aa10.63□□□□□ -0.71
USP39-212ENST00000465514 CRELD1Q96HD1 420 aa10.63□□□□□ -0.71
USP39-212ENST00000465514 UROC1Q96N76 676 aa10.63□□□□□ -0.71
USP39-212ENST00000465514 TMEM209Q96SK2 561 aa10.63□□□□□ -0.71
USP39-212ENST00000465514 ACO2Q99798 780 aaKnown RBP10.63□□□□□ -0.71
USP39-212ENST00000465514 GOLGA2P5Q9HBQ8 144 aa10.63□□□□□ -0.71
USP39-212ENST00000465514 DDX19AQ9NUU7 478 aaKnown RBP10.63□□□□□ -0.71
USP39-212ENST00000465514 DAXXQ9UER7 740 aaPredicted RBP10.63□□□□□ -0.71
USP39-212ENST00000465514 NOL7Q9UMY1 257 aaKnown RBP10.63□□□□□ -0.71
USP39-212ENST00000465514 TNFSF13BQ9Y275 285 aa10.63□□□□□ -0.71
USP39-212ENST00000465514 DENND4CQ5VZ89 1909 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 PLXND1Q9Y4D7 1925 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 A0A1W2PRU2 124 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 E9PMD0 336 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 TRAPPC3O43617 180 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 APBB3O95704 486 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 GRM5P41594 1212 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 BRCC3P46736 316 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 NPTX2P47972 431 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 TOB1P50616 345 aaPredicted RBP10.62□□□□□ -0.71
USP39-212ENST00000465514 YARSP54577 528 aaKnown RBP10.62□□□□□ -0.71
USP39-212ENST00000465514 PEX3P56589 373 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 OSTNP61366 133 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 HMGN5P82970 282 aaKnown RBP10.62□□□□□ -0.71
USP39-212ENST00000465514 SOX4Q06945 474 aaPredicted RBP10.62□□□□□ -0.71
USP39-212ENST00000465514 GRSF1Q12849 480 aaKnown RBP eCLIP10.62□□□□□ -0.71
USP39-212ENST00000465514 LMAN2Q12907 356 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 SEMA3BQ13214 749 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 ZNF423Q2M1K9 1284 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 TRIM61Q5EBN2 209 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 TMEM196Q5HYL7 178 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 ALKAL1Q6UXT8 129 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 CEP120Q8N960 986 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 IGSF22Q8N9C0 903 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 FAM184AQ8NB25 1140 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 LEMD2Q8NC56 503 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 C3orf58Q8NDZ4 430 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 SNX29Q8TEQ0 813 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 PIGKQ92643 395 aa10.62□□□□□ -0.71
USP39-212ENST00000465514 ZSCAN31Q96LW9 406 aaPredicted RBP10.62□□□□□ -0.71
USP39-212ENST00000465514 ZNF512Q96ME7 567 aaPredicted RBP10.62□□□□□ -0.71
USP39-212ENST00000465514 CCDC94Q9BW85 323 aaPredicted RBP10.62□□□□□ -0.71
USP39-212ENST00000465514 GPR88Q9GZN0 384 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms