RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 ZNF516Q92618 1163 aa13.28□□□□□ -0.28
CLCNKA-204ENST00000464764 TAS2R1Q9NYW7 299 aa13.28□□□□□ -0.28
CLCNKA-204ENST00000464764 STOML1Q9UBI4 398 aa13.28□□□□□ -0.28
CLCNKA-204ENST00000464764 CLUHO75153 1309 aa13.28□□□□□ -0.28
CLCNKA-204ENST00000464764 TLR3O15455 904 aaKnown RBP13.28□□□□□ -0.28
CLCNKA-204ENST00000464764 ZCCHC18P0CG32 403 aa13.28□□□□□ -0.28
CLCNKA-204ENST00000464764 GYS1P13807 737 aa13.28□□□□□ -0.28
CLCNKA-204ENST00000464764 AMPD1P23109 780 aa13.28□□□□□ -0.28
CLCNKA-204ENST00000464764 SLC1A1P43005 524 aa13.28□□□□□ -0.28
CLCNKA-204ENST00000464764 NRLP54845 237 aa13.28□□□□□ -0.28
CLCNKA-204ENST00000464764 ZBTB16Q05516 673 aa13.28□□□□□ -0.28
CLCNKA-204ENST00000464764 SEPT7Q16181 437 aaKnown RBP13.28□□□□□ -0.28
CLCNKA-204ENST00000464764 C12orf56Q8IXR9 622 aa13.28□□□□□ -0.28
CLCNKA-204ENST00000464764 KCTD17Q8N5Z5 321 aa13.28□□□□□ -0.28
CLCNKA-204ENST00000464764 FBXO41Q8TF61 875 aa13.28□□□□□ -0.28
CLCNKA-204ENST00000464764 PTCD3Q96EY7 689 aaKnown RBP13.28□□□□□ -0.28
CLCNKA-204ENST00000464764 TDRD3Q9H7E2 651 aaKnown RBP13.28□□□□□ -0.28
CLCNKA-204ENST00000464764 ETAA1Q9NY74 926 aa13.28□□□□□ -0.28
CLCNKA-204ENST00000464764 COL20A1Q9P218 1284 aa13.28□□□□□ -0.28
CLCNKA-204ENST00000464764 ANKFY1Q9P2R3 1169 aa13.28□□□□□ -0.28
CLCNKA-204ENST00000464764 IVNS1ABPQ9Y6Y0 642 aa13.28□□□□□ -0.28
CLCNKA-204ENST00000464764 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.28□□□□□ -0.28
CLCNKA-204ENST00000464764 HAUS5O94927 633 aa13.27□□□□□ -0.28
CLCNKA-204ENST00000464764 YWHABP31946 246 aaKnown RBP13.27□□□□□ -0.28
CLCNKA-204ENST00000464764 NEK3P51956 506 aa13.27□□□□□ -0.28
CLCNKA-204ENST00000464764 DYNLT1P63172 113 aa13.27□□□□□ -0.28
CLCNKA-204ENST00000464764 LBRQ14739 615 aaKnown RBP13.27□□□□□ -0.28
CLCNKA-204ENST00000464764 FNBP1LQ5T0N5 605 aa13.27□□□□□ -0.28
CLCNKA-204ENST00000464764 FYB2Q5VWT5 728 aa13.27□□□□□ -0.28
CLCNKA-204ENST00000464764 MON1BQ7L1V2 547 aa13.27□□□□□ -0.28
CLCNKA-204ENST00000464764 VPS52Q8N1B4 723 aa13.27□□□□□ -0.28
CLCNKA-204ENST00000464764 FAM213AQ9BRX8 229 aa13.27□□□□□ -0.28
CLCNKA-204ENST00000464764 TBX20Q9UMR3 447 aa13.27□□□□□ -0.28
CLCNKA-204ENST00000464764 COQ4Q9Y3A0 265 aa13.27□□□□□ -0.28
CLCNKA-204ENST00000464764 NRAPQ86VF7 1730 aa13.27□□□□□ -0.29
CLCNKA-204ENST00000464764 FOCADQ5VW36 1801 aa13.27□□□□□ -0.29
CLCNKA-204ENST00000464764 WNK3Q9BYP7 1800 aa13.27□□□□□ -0.29
CLCNKA-204ENST00000464764 DENND3A2RUS2 1198 aa13.27□□□□□ -0.29
CLCNKA-204ENST00000464764 DHX15O43143 795 aaKnown RBP13.27□□□□□ -0.29
CLCNKA-204ENST00000464764 P4HBP07237 508 aaKnown RBP13.27□□□□□ -0.29
CLCNKA-204ENST00000464764 THOC5Q13769 683 aaKnown RBP13.27□□□□□ -0.29
CLCNKA-204ENST00000464764 LRRC74BQ6ZQY2 392 aa13.27□□□□□ -0.29
CLCNKA-204ENST00000464764 TDRPQ86YL5 185 aa13.27□□□□□ -0.29
CLCNKA-204ENST00000464764 BSNDQ8WZ55 320 aa13.27□□□□□ -0.29
CLCNKA-204ENST00000464764 WDR83Q9BRX9 315 aaKnown RBP13.27□□□□□ -0.29
CLCNKA-204ENST00000464764 KCNK13Q9HB14 408 aa13.27□□□□□ -0.29
CLCNKA-204ENST00000464764 PSMC3IPQ9P2W1 217 aaPredicted RBP13.27□□□□□ -0.29
CLCNKA-204ENST00000464764 LNPEPQ9UIQ6 1025 aa13.27□□□□□ -0.29
CLCNKA-204ENST00000464764 RABGEF1Q9UJ41 708 aa13.27□□□□□ -0.29
CLCNKA-204ENST00000464764 F8VP50 259 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 SGK1O00141 431 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 ALOX15BO15296 676 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 CCDC22O60826 627 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 PSMG1O95456 288 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 KCNA3P22001 575 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 GLRA2P23416 452 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 CACNA2D1P54289 1103 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 SGSM1Q2NKQ1 1148 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 C3orf62Q6ZUJ4 267 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 KATNAL2Q8IYT4 538 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 OGFOD1Q8N543 542 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 MCUR1Q96AQ8 359 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 CLPTM1LQ96KA5 538 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 MXRA8Q9BRK3 442 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 MANSC1Q9H8J5 431 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 AVENQ9NQS1 362 aaPredicted RBP13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 KRT82Q9NSB4 513 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 WDR35Q9P2L0 1181 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 TCRBV7S3A2A0A539 114 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 ECE2O60344 883 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 NPTX2P47972 431 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 GDF10P55107 478 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 RNASEH2BQ5TBB1 312 aaKnown RBP13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 ALYREFQ86V81 257 aaKnown RBP13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 TMEM161BQ8NDZ6 487 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 NSL1Q96IY1 281 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 AGBL1Q96MI9 1066 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 TMEM120AQ9BXJ8 343 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 CPSF2Q9P2I0 782 aaKnown RBP13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 GREB1LQ9C091 1923 aaPredicted RBP13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 FAM237BA0A1B0GVD1 139 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 KLHL33A6NCF5 533 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 ANKRD33BA6NCL7 494 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 E5RJQ4 531 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 TROVE2P10155 538 aaKnown RBP eCLIP13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 ARFIP2P53365 341 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 ROR2Q01974 943 aaKnown RBP13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 SLC34A1Q06495 639 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 ALCAMQ13740 583 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 XKR9Q5GH70 373 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 IRGCQ6NXR0 463 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 GALNT15Q8N3T1 639 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 ALLCQ8N6M5 410 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 EXD1Q8NHP7 514 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 SHKBP1Q8TBC3 707 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 TTC17Q96AE7 1141 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 ZDHHC15Q96MV8 337 aa13.26□□□□□ -0.29
CLCNKA-204ENST00000464764 PAFAH2Q99487 392 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms