RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 GATA6Q92908 595 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 RBM41Q96IZ5 413 aaKnown RBP7.7□□□□□ -1.18
USP48-206ENST00000464577 TRIM55Q9BYV6 548 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 PIDD1Q9HB75 910 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 MRPL47Q9HD33 250 aaKnown RBP7.7□□□□□ -1.18
USP48-206ENST00000464577 CREBZFQ9NS37 354 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 ARL8BQ9NVJ2 186 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 RAB20Q9NX57 234 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 PI4KBQ9UBF8 816 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 PRR12Q9ULL5 1215 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 A0A1W2PPM1 405 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 FAM196BA6NMK8 535 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 F8W8V4 182 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 CAPN9O14815 690 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 PLSCR1O15162 318 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 GYG2O15488 501 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 UPP2O95045 317 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 P4HBP07237 508 aaKnown RBP7.69□□□□□ -1.18
USP48-206ENST00000464577 ARP10275 920 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 KRT5P13647 590 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 TSHRP16473 764 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 KCNA3P22001 575 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 PHBP35232 272 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 NSFP46459 744 aaKnown RBP7.69□□□□□ -1.18
USP48-206ENST00000464577 RAP1GDS1P52306 607 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 TAS2R40P59535 323 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 MCL1Q07820 350 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 NFX1Q12986 1120 aaKnown RBP7.69□□□□□ -1.18
USP48-206ENST00000464577 FASTKD3Q14CZ7 662 aaKnown RBP7.69□□□□□ -1.18
USP48-206ENST00000464577 AOC3Q16853 763 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 SHROOM1Q2M3G4 852 aaPredicted RBP7.69□□□□□ -1.18
USP48-206ENST00000464577 KLHL38Q2WGJ6 581 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 CBWD2Q8IUF1 395 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 ZFPM1Q8IX07 1006 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 RCOR2Q8IZ40 523 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 RFWD2Q8NHY2 731 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 TAS1R2Q8TE23 839 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 MZB1Q8WU39 189 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 STMN2Q93045 179 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 MCUR1Q96AQ8 359 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 DTNBP1Q96EV8 351 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 VCPIP1Q96JH7 1222 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 FGD4Q96M96 766 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 MFSD14AQ96MC6 490 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 FBXL18Q96ME1 805 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 PCDH9Q9HC56 1237 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 ANGPTL2Q9UKU9 493 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 PCDHB2Q9Y5E7 798 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 NUMBLQ9Y6R0 609 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 SCINQ9Y6U3 715 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 BTAF1O14981 1849 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 GOLGA8IPA6NC78 632 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 GOLGA8JA6NMD2 632 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 PDLIM1O00151 329 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 IPO5O00410 1097 aaKnown RBP7.69□□□□□ -1.18
USP48-206ENST00000464577 MAGEC1O60732 1142 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 TBX10O75333 385 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 DHRS4L1P0CG22 281 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 SLURP2P0DP57 97 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 KRT4P19013 534 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 ADRA1DP25100 572 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 RARRES1P49788 294 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 ARSEP51690 589 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 ARFIP2P53365 341 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 SESN3P58005 492 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 GPS1Q13098 491 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 CUL3Q13618 768 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 SEPT7Q16181 437 aaKnown RBP7.69□□□□□ -1.18
USP48-206ENST00000464577 ABCB5Q2M3G0 1257 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 TRAPPC3LQ5T215 181 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 LRRC38Q5VT99 294 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 RNF220Q5VTB9 566 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 FOXB2Q5VYV0 432 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 PLEKHA7Q6IQ23 1121 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 CCDC62Q6P9F0 684 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 ADGRD1Q6QNK2 874 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 MIER3Q7Z3K6 550 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 PCGF5Q86SE9 256 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 ZC3H18Q86VM9 953 aaKnown RBP7.69□□□□□ -1.18
USP48-206ENST00000464577 ZBED8Q8IZ13 594 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 VPS52Q8N1B4 723 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 BANPQ8N9N5 519 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 ATP11CQ8NB49 1132 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 PTPRN2Q92932 1015 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 NKD2Q969F2 451 aaPredicted RBP7.69□□□□□ -1.18
USP48-206ENST00000464577 AZIN2Q96A70 460 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 ZDHHC15Q96MV8 337 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 ZNF184Q99676 751 aaPredicted RBP7.69□□□□□ -1.18
USP48-206ENST00000464577 GORASP1Q9BQQ3 440 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 IDI2Q9BXS1 227 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 FHDC1Q9C0D6 1143 aaPredicted RBP7.69□□□□□ -1.18
USP48-206ENST00000464577 MANSC1Q9H8J5 431 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 HEY2Q9UBP5 337 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 DNAJB4Q9UDY4 337 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 RABGEF1Q9UJ41 708 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 CCNL1Q9UK58 526 aaPredicted RBP7.69□□□□□ -1.18
USP48-206ENST00000464577 DNPEPQ9ULA0 475 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 POLIQ9UNA4 740 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 ZHX2Q9Y6X8 837 aa7.69□□□□□ -1.18
USP48-206ENST00000464577 SLX4Q8IY92 1834 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms