RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 TFAP2BQ92481 460 aa23.08■■□□□ 1.29
PDLIM2-216ENST00000464275 TRIM7Q9C029 511 aa23.08■■□□□ 1.29
PDLIM2-216ENST00000464275 DPP3Q9NY33 737 aa23.08■■□□□ 1.29
PDLIM2-216ENST00000464275 GINS2Q9Y248 185 aa23.08■■□□□ 1.29
PDLIM2-216ENST00000464275 DERAQ9Y315 318 aa23.08■■□□□ 1.29
PDLIM2-216ENST00000464275 BEX3Q00994 111 aa23.07■■□□□ 1.28
PDLIM2-216ENST00000464275 NOTUMQ6P988 496 aa23.07■■□□□ 1.28
PDLIM2-216ENST00000464275 FEZF2Q8TBJ5 459 aa23.07■■□□□ 1.28
PDLIM2-216ENST00000464275 HPDLQ96IR7 371 aa23.07■■□□□ 1.28
PDLIM2-216ENST00000464275 OSMRQ99650 979 aa23.07■■□□□ 1.28
PDLIM2-216ENST00000464275 SDCBP2Q9H190 292 aa23.07■■□□□ 1.28
PDLIM2-216ENST00000464275 FAM124BQ9H5Z6 455 aaPredicted RBP23.07■■□□□ 1.28
PDLIM2-216ENST00000464275 CDHR5Q9HBB8 845 aa23.07■■□□□ 1.28
PDLIM2-216ENST00000464275 ERVK-5Q9HDB9 667 aa23.07■■□□□ 1.28
PDLIM2-216ENST00000464275 AGAP1Q9UPQ3 857 aa23.07■■□□□ 1.28
PDLIM2-216ENST00000464275 PHF2O75151 1096 aa23.07■■□□□ 1.28
PDLIM2-216ENST00000464275 AXLP30530 894 aa23.07■■□□□ 1.28
PDLIM2-216ENST00000464275 HIC1Q14526 733 aa23.07■■□□□ 1.28
PDLIM2-216ENST00000464275 LRRC31Q6UY01 552 aa23.07■■□□□ 1.28
PDLIM2-216ENST00000464275 ADAT2Q7Z6V5 191 aaKnown RBP23.07■■□□□ 1.28
PDLIM2-216ENST00000464275 SLC13A5Q86YT5 568 aaPredicted RBP23.07■■□□□ 1.28
PDLIM2-216ENST00000464275 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.07■■□□□ 1.28
PDLIM2-216ENST00000464275 DNAJB3Q8WWF6 145 aa23.07■■□□□ 1.28
PDLIM2-216ENST00000464275 KIF12Q96FN5 646 aa23.07■■□□□ 1.28
PDLIM2-216ENST00000464275 LCMT1Q9UIC8 334 aa23.07■■□□□ 1.28
PDLIM2-216ENST00000464275 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.07■■□□□ 1.28
PDLIM2-216ENST00000464275 TTI1O43156 1089 aa23.06■■□□□ 1.28
PDLIM2-216ENST00000464275 AKR1A1P14550 325 aa23.06■■□□□ 1.28
PDLIM2-216ENST00000464275 RAD23BP54727 409 aa23.06■■□□□ 1.28
PDLIM2-216ENST00000464275 DHX34Q14147 1143 aaKnown RBP23.06■■□□□ 1.28
PDLIM2-216ENST00000464275 PPP1R13LQ8WUF5 828 aa23.06■■□□□ 1.28
PDLIM2-216ENST00000464275 LHX5Q9H2C1 402 aa23.06■■□□□ 1.28
PDLIM2-216ENST00000464275 MTUS1Q9ULD2 1270 aa23.06■■□□□ 1.28
PDLIM2-216ENST00000464275 FAM187AA6NFU0 413 aa23.05■■□□□ 1.28
PDLIM2-216ENST00000464275 TLR3O15455 904 aaKnown RBP23.05■■□□□ 1.28
PDLIM2-216ENST00000464275 CD19P15391 556 aa23.05■■□□□ 1.28
PDLIM2-216ENST00000464275 CHRNA3P32297 505 aa23.05■■□□□ 1.28
PDLIM2-216ENST00000464275 MAN1A1P33908 653 aa23.05■■□□□ 1.28
PDLIM2-216ENST00000464275 TM4SF4P48230 202 aa23.05■■□□□ 1.28
PDLIM2-216ENST00000464275 CDH8P55286 799 aa23.05■■□□□ 1.28
PDLIM2-216ENST00000464275 FSCN1Q16658 493 aaKnown RBP23.05■■□□□ 1.28
PDLIM2-216ENST00000464275 SRLQ86TD4 932 aa23.05■■□□□ 1.28
PDLIM2-216ENST00000464275 SEC14L1Q92503 715 aa23.05■■□□□ 1.28
PDLIM2-216ENST00000464275 SMYD3Q9H7B4 428 aa23.05■■□□□ 1.28
PDLIM2-216ENST00000464275 UTP11Q9Y3A2 253 aaKnown RBP23.05■■□□□ 1.28
PDLIM2-216ENST00000464275 C17orf102A2RUQ5 167 aa23.05■■□□□ 1.28
PDLIM2-216ENST00000464275 TREHO43280 583 aa23.05■■□□□ 1.28
PDLIM2-216ENST00000464275 CILPO75339 1184 aa23.05■■□□□ 1.28
PDLIM2-216ENST00000464275 GNAT1P11488 350 aa23.05■■□□□ 1.28
PDLIM2-216ENST00000464275 TMEM130Q8N3G9 435 aa23.05■■□□□ 1.28
PDLIM2-216ENST00000464275 TTC39CQ8N584 583 aa23.05■■□□□ 1.28
PDLIM2-216ENST00000464275 WDTC1Q8N5D0 677 aa23.05■■□□□ 1.28
PDLIM2-216ENST00000464275 RIN2Q8WYP3 895 aaPredicted RBP23.05■■□□□ 1.28
PDLIM2-216ENST00000464275 RAB17Q9H0T7 212 aa23.05■■□□□ 1.28
PDLIM2-216ENST00000464275 SNTG2Q9NY99 539 aa23.05■■□□□ 1.28
PDLIM2-216ENST00000464275 IP6K2Q9UHH9 426 aa23.05■■□□□ 1.28
PDLIM2-216ENST00000464275 CA12O43570 354 aa23.04■■□□□ 1.28
PDLIM2-216ENST00000464275 PSTPIP1O43586 416 aa23.04■■□□□ 1.28
PDLIM2-216ENST00000464275 GUCY2FP51841 1108 aa23.04■■□□□ 1.28
PDLIM2-216ENST00000464275 YARSP54577 528 aaKnown RBP23.04■■□□□ 1.28
PDLIM2-216ENST00000464275 SKOR1P84550 965 aa23.04■■□□□ 1.28
PDLIM2-216ENST00000464275 DR1Q01658 176 aa23.04■■□□□ 1.28
PDLIM2-216ENST00000464275 TAP1Q03518 808 aa23.04■■□□□ 1.28
PDLIM2-216ENST00000464275 TRADDQ15628 312 aa23.04■■□□□ 1.28
PDLIM2-216ENST00000464275 ERICH1Q86X53 443 aa23.04■■□□□ 1.28
PDLIM2-216ENST00000464275 PRELID2Q8N945 189 aa23.04■■□□□ 1.28
PDLIM2-216ENST00000464275 SLC4A11Q8NBS3 891 aa23.04■■□□□ 1.28
PDLIM2-216ENST00000464275 SNX27Q96L92 541 aa23.04■■□□□ 1.28
PDLIM2-216ENST00000464275 RUNDC3BQ96NL0 473 aa23.04■■□□□ 1.28
PDLIM2-216ENST00000464275 CELF4Q9BZC1 486 aaKnown RBP23.04■■□□□ 1.28
PDLIM2-216ENST00000464275 FAM114A2Q9NRY5 505 aa23.04■■□□□ 1.28
PDLIM2-216ENST00000464275 SCN10AQ9Y5Y9 1956 aa23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 TCRBV5S1A1TA0A578 114 aa23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 KPNA6O60684 536 aa23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 DUSP11O75319 330 aaKnown RBP23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 CTGFP29279 349 aa23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 PURAQ00577 322 aaKnown RBP23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 CYP1B1Q16678 543 aa23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 DENND1BQ6P3S1 775 aa23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 NME8Q8N427 588 aa23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 TMEM176AQ96HP8 235 aa23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 EIF2AQ9BY44 585 aaKnown RBP23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 FAM107BQ9H098 131 aa23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 STRIP2Q9ULQ0 834 aa23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 CASP8AP2Q9UKL3 1982 aa23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 FSCN2O14926 492 aa23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 FAM153BP0C7A2 387 aa23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 HOXC8P31273 242 aa23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 PTPN11Q06124 597 aaPredicted RBP23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 SLC20A2Q08357 652 aa23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 HLTFQ14527 1009 aaKnown RBP eCLIP23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 SNX17Q15036 470 aa23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 FAM153CQ494X1 144 aa23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 CFAP58Q5T655 872 aa23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 DNAJC24Q6P3W2 148 aa23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 RHOT1Q8IXI2 618 aa23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 MAIP1Q8WWC4 291 aa23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 MAGOHBQ96A72 148 aaKnown RBP23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 ELOVL4Q9GZR5 314 aa23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 FAM153AQ9UHL3 310 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms