RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 FAM200AQ8TCP9 573 aa18.77■□□□□ 0.6
HMGN1-210ENST00000464078 GTSE1Q9NYZ3 720 aa18.77■□□□□ 0.6
HMGN1-210ENST00000464078 ODF2LQ9ULJ1 636 aa18.77■□□□□ 0.6
HMGN1-210ENST00000464078 ANK1P16157 1881 aa18.77■□□□□ 0.6
HMGN1-210ENST00000464078 LACTBL1A8MY62 500 aa18.76■□□□□ 0.59
HMGN1-210ENST00000464078 DPYSL4O14531 572 aa18.76■□□□□ 0.59
HMGN1-210ENST00000464078 OGTO15294 1046 aa18.76■□□□□ 0.59
HMGN1-210ENST00000464078 PRAMEF12O95522 483 aa18.76■□□□□ 0.59
HMGN1-210ENST00000464078 MATR3P43243 847 aaKnown RBP eCLIP18.76■□□□□ 0.59
HMGN1-210ENST00000464078 LILRA4P59901 499 aa18.76■□□□□ 0.59
HMGN1-210ENST00000464078 ARHGAP15Q53QZ3 475 aa18.76■□□□□ 0.59
HMGN1-210ENST00000464078 BICD1Q96G01 975 aa18.76■□□□□ 0.59
HMGN1-210ENST00000464078 ATXN3LQ9H3M9 355 aa18.76■□□□□ 0.59
HMGN1-210ENST00000464078 ZMYM5Q9UJ78 669 aa18.76■□□□□ 0.59
HMGN1-210ENST00000464078 SLC27A5Q9Y2P5 690 aa18.76■□□□□ 0.59
HMGN1-210ENST00000464078 PPEF2O14830 753 aa18.75■□□□□ 0.59
HMGN1-210ENST00000464078 CYP11A1P05108 521 aa18.75■□□□□ 0.59
HMGN1-210ENST00000464078 PLA2G4BP0C869 781 aa18.75■□□□□ 0.59
HMGN1-210ENST00000464078 GABRR2P28476 465 aa18.75■□□□□ 0.59
HMGN1-210ENST00000464078 LIG4P49917 911 aa18.75■□□□□ 0.59
HMGN1-210ENST00000464078 GUCY2FP51841 1108 aa18.75■□□□□ 0.59
HMGN1-210ENST00000464078 SRSF5Q13243 272 aaKnown RBP18.75■□□□□ 0.59
HMGN1-210ENST00000464078 TMEM119Q4V9L6 283 aa18.75■□□□□ 0.59
HMGN1-210ENST00000464078 RILPL1Q5EBL4 403 aa18.75■□□□□ 0.59
HMGN1-210ENST00000464078 GPR158Q5T848 1215 aa18.75■□□□□ 0.59
HMGN1-210ENST00000464078 ARMCX5Q6P1M9 558 aa18.75■□□□□ 0.59
HMGN1-210ENST00000464078 WDR5BQ86VZ2 330 aa18.75■□□□□ 0.59
HMGN1-210ENST00000464078 CD302Q8IX05 232 aa18.75■□□□□ 0.59
HMGN1-210ENST00000464078 FAM160A2Q8N612 972 aaPredicted RBP18.75■□□□□ 0.59
HMGN1-210ENST00000464078 OR10T2Q8NGX3 314 aa18.75■□□□□ 0.59
HMGN1-210ENST00000464078 BPIFB1Q8TDL5 484 aa18.75■□□□□ 0.59
HMGN1-210ENST00000464078 DDX1Q92499 740 aaKnown RBP18.75■□□□□ 0.59
HMGN1-210ENST00000464078 ZFYVE19Q96K21 471 aa18.75■□□□□ 0.59
HMGN1-210ENST00000464078 SENP8Q96LD8 212 aa18.75■□□□□ 0.59
HMGN1-210ENST00000464078 TASP1Q9H6P5 420 aa18.75■□□□□ 0.59
HMGN1-210ENST00000464078 C2orf42Q9NWW7 574 aa18.75■□□□□ 0.59
HMGN1-210ENST00000464078 DENND4CQ5VZ89 1909 aa18.74■□□□□ 0.59
HMGN1-210ENST00000464078 A0A0B4J269 797 aa18.74■□□□□ 0.59
HMGN1-210ENST00000464078 CCDC163A0A0D9SF12 145 aa18.74■□□□□ 0.59
HMGN1-210ENST00000464078 SLC26A4O43511 780 aa18.74■□□□□ 0.59
HMGN1-210ENST00000464078 SEC24BO95487 1268 aa18.74■□□□□ 0.59
HMGN1-210ENST00000464078 ATF6P18850 670 aa18.74■□□□□ 0.59
HMGN1-210ENST00000464078 CDC25CP30307 473 aa18.74■□□□□ 0.59
HMGN1-210ENST00000464078 TUFMP49411 452 aaKnown RBP18.74■□□□□ 0.59
HMGN1-210ENST00000464078 MCM2P49736 904 aa18.74■□□□□ 0.59
HMGN1-210ENST00000464078 ZNF131P52739 623 aa18.74■□□□□ 0.59
HMGN1-210ENST00000464078 LIMK1P53667 647 aa18.74■□□□□ 0.59
HMGN1-210ENST00000464078 CACNB1Q02641 598 aaPredicted RBP18.74■□□□□ 0.59
HMGN1-210ENST00000464078 VEPH1Q14D04 833 aa18.74■□□□□ 0.59
HMGN1-210ENST00000464078 PON2Q15165 354 aa18.74■□□□□ 0.59
HMGN1-210ENST00000464078 ZRSR1Q15695 479 aaKnown RBP18.74■□□□□ 0.59
HMGN1-210ENST00000464078 ARSHQ5FYA8 562 aa18.74■□□□□ 0.59
HMGN1-210ENST00000464078 LOXL4Q96JB6 756 aa18.74■□□□□ 0.59
HMGN1-210ENST00000464078 TMEM209Q96SK2 561 aa18.74■□□□□ 0.59
HMGN1-210ENST00000464078 RPF1Q9H9Y2 349 aaKnown RBP18.74■□□□□ 0.59
HMGN1-210ENST00000464078 IL21Q9HBE4 155 aa18.74■□□□□ 0.59
HMGN1-210ENST00000464078 CPSF3Q9UKF6 684 aaKnown RBP18.74■□□□□ 0.59
HMGN1-210ENST00000464078 TBX20Q9UMR3 447 aa18.74■□□□□ 0.59
HMGN1-210ENST00000464078 DERAQ9Y315 318 aa18.74■□□□□ 0.59
HMGN1-210ENST00000464078 SCN1AP35498 2009 aa18.74■□□□□ 0.59
HMGN1-210ENST00000464078 SDK1Q7Z5N4 2213 aa18.73■□□□□ 0.59
HMGN1-210ENST00000464078 ANO9A1A5B4 782 aa18.73■□□□□ 0.59
HMGN1-210ENST00000464078 PIRO00625 290 aa18.73■□□□□ 0.59
HMGN1-210ENST00000464078 SOAT2O75908 522 aa18.73■□□□□ 0.59
HMGN1-210ENST00000464078 ITPRIPL2Q3MIP1 535 aa18.73■□□□□ 0.59
HMGN1-210ENST00000464078 C9orf57Q5W0N0 161 aa18.73■□□□□ 0.59
HMGN1-210ENST00000464078 ARL6IP4Q66PJ3 421 aaKnown RBP18.73■□□□□ 0.59
HMGN1-210ENST00000464078 HEATR6Q6AI08 1181 aaKnown RBP18.73■□□□□ 0.59
HMGN1-210ENST00000464078 C2orf15Q8WU43 125 aaKnown RBP18.73■□□□□ 0.59
HMGN1-210ENST00000464078 CDK5RAP3Q96JB5 506 aa18.73■□□□□ 0.59
HMGN1-210ENST00000464078 REEP2Q9BRK0 252 aa18.73■□□□□ 0.59
HMGN1-210ENST00000464078 ZCWPW1Q9H0M4 648 aa18.73■□□□□ 0.59
HMGN1-210ENST00000464078 DSEQ9UL01 958 aa18.73■□□□□ 0.59
HMGN1-210ENST00000464078 OBSL1O75147 1896 aa18.73■□□□□ 0.59
HMGN1-210ENST00000464078 ZFHX4Q86UP3 3567 aa18.72■□□□□ 0.59
HMGN1-210ENST00000464078 NPHP3-ACAD11A0A0J9YXS1 232 aa18.72■□□□□ 0.59
HMGN1-210ENST00000464078 GDF9O60383 454 aa18.72■□□□□ 0.59
HMGN1-210ENST00000464078 TNK2Q07912 1038 aa18.72■□□□□ 0.59
HMGN1-210ENST00000464078 SMARCB1Q12824 385 aa18.72■□□□□ 0.59
HMGN1-210ENST00000464078 JADE1Q6IE81 842 aa18.72■□□□□ 0.59
HMGN1-210ENST00000464078 SLC39A4Q6P5W5 647 aa18.72■□□□□ 0.59
HMGN1-210ENST00000464078 CEP68Q76N32 757 aa18.72■□□□□ 0.59
HMGN1-210ENST00000464078 GAB3Q8WWW8 586 aa18.72■□□□□ 0.59
HMGN1-210ENST00000464078 GCNAQ96QF7 691 aa18.72■□□□□ 0.59
HMGN1-210ENST00000464078 SEPT5Q99719 369 aaPredicted RBP18.72■□□□□ 0.59
HMGN1-210ENST00000464078 FAM83CQ9BQN1 747 aa18.72■□□□□ 0.59
HMGN1-210ENST00000464078 MSTO1Q9BUK6 570 aa18.72■□□□□ 0.59
HMGN1-210ENST00000464078 CCSER1Q9C0I3 900 aa18.72■□□□□ 0.59
HMGN1-210ENST00000464078 THG1LQ9NWX6 298 aaKnown RBP18.72■□□□□ 0.59
HMGN1-210ENST00000464078 C2CD2Q9Y426 696 aa18.72■□□□□ 0.59
HMGN1-210ENST00000464078 CFAP47Q6ZTR5 3102 aa18.72■□□□□ 0.59
HMGN1-210ENST00000464078 VWA3AA6NCI4 1184 aa18.71■□□□□ 0.59
HMGN1-210ENST00000464078 K7ENM7 598 aa18.71■□□□□ 0.59
HMGN1-210ENST00000464078 NFICP08651 508 aa18.71■□□□□ 0.59
HMGN1-210ENST00000464078 ABCD1P33897 745 aa18.71■□□□□ 0.59
HMGN1-210ENST00000464078 CYP4F8P98187 520 aa18.71■□□□□ 0.59
HMGN1-210ENST00000464078 TMEM132DQ14C87 1099 aa18.71■□□□□ 0.59
HMGN1-210ENST00000464078 PTPAQ15257 358 aa18.71■□□□□ 0.59
HMGN1-210ENST00000464078 ST3GAL2Q16842 350 aa18.71■□□□□ 0.59
HMGN1-210ENST00000464078 SLC39A12Q504Y0 691 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms