RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 FRMD4BQ9Y2L6 1034 aa20.26■□□□□ 0.83
COL9A3-203ENST00000462700 LRRIQ3A6PVS8 624 aaPredicted RBP20.25■□□□□ 0.83
COL9A3-203ENST00000462700 CST3P01034 146 aaPredicted RBP20.25■□□□□ 0.83
COL9A3-203ENST00000462700 CLDN10P78369 228 aa20.25■□□□□ 0.83
COL9A3-203ENST00000462700 TWF1Q12792 350 aa20.25■□□□□ 0.83
COL9A3-203ENST00000462700 COBLL1Q53SF7 1204 aa20.25■□□□□ 0.83
COL9A3-203ENST00000462700 TMEM86AQ8N2M4 240 aa20.25■□□□□ 0.83
COL9A3-203ENST00000462700 TOP6BLQ8N6T0 577 aa20.25■□□□□ 0.83
COL9A3-203ENST00000462700 CRISPLD1Q9H336 500 aa20.25■□□□□ 0.83
COL9A3-203ENST00000462700 C11orf16Q9NQ32 467 aa20.25■□□□□ 0.83
COL9A3-203ENST00000462700 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.25■□□□□ 0.83
COL9A3-203ENST00000462700 EPS15L1Q9UBC2 864 aa20.25■□□□□ 0.83
COL9A3-203ENST00000462700 YIPF1Q9Y548 306 aa20.25■□□□□ 0.83
COL9A3-203ENST00000462700 NCOR1O75376 2440 aa20.25■□□□□ 0.83
COL9A3-203ENST00000462700 MAPK13O15264 365 aa20.24■□□□□ 0.83
COL9A3-203ENST00000462700 ASGR2P07307 311 aa20.24■□□□□ 0.83
COL9A3-203ENST00000462700 PRCPP42785 496 aa20.24■□□□□ 0.83
COL9A3-203ENST00000462700 AP3M2P53677 418 aa20.24■□□□□ 0.83
COL9A3-203ENST00000462700 UBE2HP62256 183 aa20.24■□□□□ 0.83
COL9A3-203ENST00000462700 ZXDAP98168 799 aa20.24■□□□□ 0.83
COL9A3-203ENST00000462700 DUSP4Q13115 394 aa20.24■□□□□ 0.83
COL9A3-203ENST00000462700 SOWAHAQ2M3V2 549 aa20.24■□□□□ 0.83
COL9A3-203ENST00000462700 PABPC1LQ4VXU2 614 aaKnown RBP20.24■□□□□ 0.83
COL9A3-203ENST00000462700 SLC39A12Q504Y0 691 aa20.24■□□□□ 0.83
COL9A3-203ENST00000462700 CENPPQ6IPU0 288 aa20.24■□□□□ 0.83
COL9A3-203ENST00000462700 ADGRF2Q8IZF7 708 aa20.24■□□□□ 0.83
COL9A3-203ENST00000462700 ATAD1Q8NBU5 361 aa20.24■□□□□ 0.83
COL9A3-203ENST00000462700 SPATA18Q8TC71 538 aa20.24■□□□□ 0.83
COL9A3-203ENST00000462700 EDAQ92838 391 aa20.24■□□□□ 0.83
COL9A3-203ENST00000462700 GTPBP4Q9BZE4 634 aaKnown RBP20.24■□□□□ 0.83
COL9A3-203ENST00000462700 FAM86C2PA6NEL3 165 aa20.23■□□□□ 0.83
COL9A3-203ENST00000462700 GPR37L1O60883 481 aa20.23■□□□□ 0.83
COL9A3-203ENST00000462700 AKAP3O75969 853 aa20.23■□□□□ 0.83
COL9A3-203ENST00000462700 RHOP08100 348 aa20.23■□□□□ 0.83
COL9A3-203ENST00000462700 PTPN2P17706 415 aa20.23■□□□□ 0.83
COL9A3-203ENST00000462700 RPL13P26373 211 aaKnown RBP20.23■□□□□ 0.83
COL9A3-203ENST00000462700 DLG4P78352 724 aa20.23■□□□□ 0.83
COL9A3-203ENST00000462700 EDRF1Q3B7T1 1238 aa20.23■□□□□ 0.83
COL9A3-203ENST00000462700 TMEM31Q5JXX7 168 aa20.23■□□□□ 0.83
COL9A3-203ENST00000462700 TDRD10Q5VZ19 366 aaKnown RBP20.23■□□□□ 0.83
COL9A3-203ENST00000462700 DPH6Q7L8W6 267 aa20.23■□□□□ 0.83
COL9A3-203ENST00000462700 LIMS2Q7Z4I7 341 aa20.23■□□□□ 0.83
COL9A3-203ENST00000462700 OSTM1Q86WC4 334 aa20.23■□□□□ 0.83
COL9A3-203ENST00000462700 TMC2Q8TDI7 906 aa20.23■□□□□ 0.83
COL9A3-203ENST00000462700 DDX43Q9NXZ2 648 aaKnown RBP20.23■□□□□ 0.83
COL9A3-203ENST00000462700 CEP72Q9P209 647 aa20.23■□□□□ 0.83
COL9A3-203ENST00000462700 HSFX1Q9UBD0 423 aa20.23■□□□□ 0.83
COL9A3-203ENST00000462700 SORCS3Q9UPU3 1222 aa20.23■□□□□ 0.83
COL9A3-203ENST00000462700 GABRDO14764 452 aa20.22■□□□□ 0.83
COL9A3-203ENST00000462700 PHACTR2O75167 634 aa20.22■□□□□ 0.83
COL9A3-203ENST00000462700 STAU1O95793 577 aaKnown RBP20.22■□□□□ 0.83
COL9A3-203ENST00000462700 LAMP2P13473 410 aa20.22■□□□□ 0.83
COL9A3-203ENST00000462700 MYL7Q01449 175 aa20.22■□□□□ 0.83
COL9A3-203ENST00000462700 TSPY1Q01534 308 aa20.22■□□□□ 0.83
COL9A3-203ENST00000462700 SMARCB1Q12824 385 aa20.22■□□□□ 0.83
COL9A3-203ENST00000462700 PLD1Q13393 1074 aa20.22■□□□□ 0.83
COL9A3-203ENST00000462700 ADAM9Q13443 819 aa20.22■□□□□ 0.83
COL9A3-203ENST00000462700 TRPC3Q13507 836 aa20.22■□□□□ 0.83
COL9A3-203ENST00000462700 LRRTM3Q86VH5 581 aa20.22■□□□□ 0.83
COL9A3-203ENST00000462700 DCP1BQ8IZD4 617 aaKnown RBP20.22■□□□□ 0.83
COL9A3-203ENST00000462700 ELMOD1Q8N336 334 aa20.22■□□□□ 0.83
COL9A3-203ENST00000462700 TTC9BQ8N6N2 239 aa20.22■□□□□ 0.83
COL9A3-203ENST00000462700 ITFG1Q8TB96 612 aa20.22■□□□□ 0.83
COL9A3-203ENST00000462700 C2orf15Q8WU43 125 aaKnown RBP20.22■□□□□ 0.83
COL9A3-203ENST00000462700 ACBD6Q9BR61 282 aa20.22■□□□□ 0.83
COL9A3-203ENST00000462700 CORO1BQ9BR76 489 aa20.22■□□□□ 0.83
COL9A3-203ENST00000462700 AVENQ9NQS1 362 aaPredicted RBP20.22■□□□□ 0.83
COL9A3-203ENST00000462700 MAN1B1Q9UKM7 699 aa20.22■□□□□ 0.83
COL9A3-203ENST00000462700 CDH7Q9ULB5 785 aa20.22■□□□□ 0.83
COL9A3-203ENST00000462700 SLC27A5Q9Y2P5 690 aa20.22■□□□□ 0.83
COL9A3-203ENST00000462700 C4BPAP04003 597 aaKnown RBP20.21■□□□□ 0.83
COL9A3-203ENST00000462700 ATICP31939 592 aa20.21■□□□□ 0.83
COL9A3-203ENST00000462700 PSMC2P35998 433 aaKnown RBP20.21■□□□□ 0.83
COL9A3-203ENST00000462700 LHX1P48742 406 aa20.21■□□□□ 0.83
COL9A3-203ENST00000462700 MYL6P60660 151 aa20.21■□□□□ 0.83
COL9A3-203ENST00000462700 BIRC3Q13489 604 aa20.21■□□□□ 0.83
COL9A3-203ENST00000462700 MTMR3Q13615 1198 aa20.21■□□□□ 0.83
COL9A3-203ENST00000462700 SLC5A9Q2M3M2 681 aa20.21■□□□□ 0.83
COL9A3-203ENST00000462700 IQCEQ6IPM2 695 aa20.21■□□□□ 0.83
COL9A3-203ENST00000462700 INTS8Q75QN2 995 aaKnown RBP20.21■□□□□ 0.83
COL9A3-203ENST00000462700 FAM186BQ8IYM0 893 aa20.21■□□□□ 0.83
COL9A3-203ENST00000462700 ADSSL1Q8N142 457 aa20.21■□□□□ 0.83
COL9A3-203ENST00000462700 SPPL2BQ8TCT7 592 aa20.21■□□□□ 0.83
COL9A3-203ENST00000462700 KBTBD7Q8WVZ9 684 aa20.21■□□□□ 0.83
COL9A3-203ENST00000462700 FGF13Q92913 245 aa20.21■□□□□ 0.83
COL9A3-203ENST00000462700 SYAP1Q96A49 352 aaPredicted RBP20.21■□□□□ 0.83
COL9A3-203ENST00000462700 ZNF512Q96ME7 567 aaPredicted RBP20.21■□□□□ 0.83
COL9A3-203ENST00000462700 XYLT2Q9H1B5 865 aa20.21■□□□□ 0.83
COL9A3-203ENST00000462700 KCNK12Q9HB15 430 aa20.21■□□□□ 0.83
COL9A3-203ENST00000462700 IGSF9Q9P2J2 1179 aa20.21■□□□□ 0.83
COL9A3-203ENST00000462700 MRPS23Q9Y3D9 190 aaKnown RBP20.21■□□□□ 0.83
COL9A3-203ENST00000462700 ZFP37Q9Y6Q3 630 aaPredicted RBP20.21■□□□□ 0.83
COL9A3-203ENST00000462700 IKBKBO14920 756 aa20.2■□□□□ 0.82
COL9A3-203ENST00000462700 ACAT1P24752 427 aaKnown RBP20.2■□□□□ 0.82
COL9A3-203ENST00000462700 ALDH1A3P47895 512 aa20.2■□□□□ 0.82
COL9A3-203ENST00000462700 VAMP7P51809 220 aa20.2■□□□□ 0.82
COL9A3-203ENST00000462700 CDR1P51861 262 aa20.2■□□□□ 0.82
COL9A3-203ENST00000462700 WDR72Q3MJ13 1102 aa20.2■□□□□ 0.82
COL9A3-203ENST00000462700 INTS6LQ5JSJ4 861 aaKnown RBP20.2■□□□□ 0.82
COL9A3-203ENST00000462700 C1orf220Q5T0J3 134 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms